Shubham Khetan

A Common Type 2 Diabetes Risk Variant Potentiates Activity of an Evolutionarily Conserved Islet Stretch Enhancer and Increases C2CD4A and C2CD4B Expression.

Stephen C. J. Parker, M. Laakso, F. Collins, 2018, American journal of human genetics.

CoRE-ATAC: A deep learning model for the functional classification of regulatory elements from single cell and bulk ATAC-seq data

R. Tewhey, D. Ucar, M. Stitzel, 2020, bioRxiv.

A neural network based model effectively predicts enhancers from clinical ATAC-seq samples

D. Ucar, M. Stitzel, A. Uyar, 2018, Scientific Reports.

Functional characterization of T2D-associated SNP effects on baseline and ER stress-responsive β cell transcriptional activation

Jacob C. Ulirsch, R. Tewhey, D. Ucar, 2021, Nature Communications.

Functional characterization of thousands of type 2 diabetes-associated and chromatin-modulating variants under steady state and endoplasmic reticulum stress

R. Tewhey, D. Ucar, R. Kursawe, 2020, bioRxiv.

Chromatin accessibility profiling uncovers genetic- and T2D disease state-associated changes in cis-regulatory element use in human islets

D. Ucar, Nathan Lawlor, R. Kursawe, 2017, bioRxiv.

Type 2 Diabetes–Associated Genetic Variants Regulate Chromatin Accessibility in Human Islets

D. Ucar, Nathan Lawlor, R. Kursawe, 2018, Diabetes.

Genomics of Islet (Dys)function and Type 2 Diabetes.

Duygu Ucar, Nathan Lawlor, D. Ucar, 2017, Trends in genetics : TIG.