A. Charkowski

发表

Differences in Growth of Salmonella enterica and Escherichia coli O157:H7 on Alfalfa Sprouts

A. Charkowski, J. Barak, C. Sarreal, 2002, Applied and Environmental Microbiology.

Application of Marker Assisted Selection for Potato Virus Y Resistance in the University of Wisconsin Potato Breeding Program

A. Charkowski, A. Fulladolsa, F. Navarro, 2015, American Journal of Potato Research.

The soft rot Erwinia

A. Charkowski, 2007 .

Genomic Diversity of Erwinia carotovora subsp. carotovora and Its Correlation with Virulence

A. Charkowski, J. Barak, Yap Mee-Ngan, 2004, Applied and Environmental Microbiology.

Biology and control of Pectobacterium in potato

A. Charkowski, 2015, American Journal of Potato Research.

Pectobacterium carotovorum elicits plant cell death with DspE/F but the P. carotovorum DspE does not suppress callose or induce expression of plant genes early in plant-microbe interactions.

Clifford S. Hogan, A. Charkowski, S. Lommel, 2011, Molecular plant-microbe interactions : MPMI.

Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation.

D. K. Willis, A. Charkowski, C. Jahn, 2008, Journal of microbiological methods.

Host range and molecular phylogenies of the soft rot enterobacterial genera pectobacterium and dickeya.

J. Glasner, N. Perna, Michael E. Hibbing, 2007, Phytopathology.

Dynamic regulation of GacA in type III secretion, pectinase gene expression, pellicle formation, and pathogenicity of Dickeya dadantii (Erwinia chrysanthemi 3937).

Ching-Hong Yang, Chang Jae Choi, A. Charkowski, 2008, Molecular plant-microbe interactions : MPMI.

Niche-specificity and the variable fraction of the Pectobacterium pan-genome.

Bryan S. Biehl, Anna I. Rissman, J. Glasner, 2008, Molecular plant-microbe interactions : MPMI.

The Plant Phenolic Compound p-Coumaric Acid Represses Gene Expression in the Dickeya dadantii Type III Secretion System

Ching-Hong Yang, A. Charkowski, Xin Chen, 2008, Applied and Environmental Microbiology.

Decaying signals: will understanding bacterial-plant communications lead to control of soft rot?

A. Charkowski, 2009, Current opinion in biotechnology.

The role of secretion systems and small molecules in soft-rot Enterobacteriaceae pathogenicity.

N. Perna, Ching-Hong Yang, M. Pirhonen, 2012, Annual review of phytopathology.

Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning

J. Glasner, N. Perna, A. Charkowski, 2014, BMC Genomics.

Potato Common Scab: a Review of the Causal Pathogens, Management Practices, Varietal Resistance Screening Methods, and Host Resistance

A. Charkowski, S. Jansky, A. Gevens, 2017, American Journal of Potato Research.

Detection and Quantification of Spongospora subterranea Sporosori in Soil by Quantitative Real-Time PCR.

A. Charkowski, A. Fulladolsa, N. Gudmestad, 2019, Plant disease.

Role of the Hrp type III protein secretion system in growth of Pseudomonas syringae pv. syringae B728a on host plants in the field.

D. K. Willis, S. S. Hirano, A. Charkowski, 1999, Proceedings of the National Academy of Sciences of the United States of America.

Potato Seed Decay and Stand Loss is Not Caused by Dickeya Spread during Cutting and Handling of Seed Potatoes

Steve A. Johnson, A. Charkowski, G. Secor, 2021 .

Opportunistic Pathogens of Terrestrial Plants

A. Charkowski, 2016 .

The Response regulator HrpY of Dickeya dadantii 3937 regulates virulence genes not linked to the hrp cluster.

Ching-Hong Yang, A. Charkowski, M. Yap, 2008, Molecular plant-microbe interactions : MPMI.

Diseases Caused by Pectobacterium and Dickeya Species Around the World

Steven B. Johnson, Rodney A. Martin, A. Charkowski, 2021 .

The flagellar sigma factor fliA is required for Dickeya dadantii virulence.

D. K. Willis, A. Charkowski, C. Jahn, 2008, Molecular plant-microbe interactions : MPMI.

Population behavior analysis of dspE and pelD regulation in Erwinia chrysanthemi 3937.

Ching-Hong Yang, A. Charkowski, Shihui Yang, 2006, Molecular plant-microbe interactions : MPMI.

Differences in Attachment of Salmonella enterica Serovars and Escherichia coli O157:H7 to Alfalfa Sprouts

A. Charkowski, J. Barak, L. Whitehand, 2002, Applied and Environmental Microbiology.

Integrating Spectroscopy with Potato Disease Management.

P. Townsend, J. Couture, A. Charkowski, 2018, Plant disease.

The Role of ATP-binding Cassette (ABC) Transporters in Bacterial Phytopathogenesis.

A. Charkowski, Yuan Zeng, 2020, Phytopathology.

Pseudomonas syringae Hrp type III secretion system and effector proteins.

D. Fouts, K. van Dijk, O. Schneewind, 2000, Proceedings of the National Academy of Sciences of the United States of America.

The Pseudomonas syringae pv. tomato HrpW Protein Has Domains Similar to Harpins and Pectate Lyases and Can Elicit the Plant Hypersensitive Response and Bind to Pectate

S. He, A. Charkowski, A. Collmer, 1998, Journal of bacteriology.

Development of the Automated Primer Design Workflow Uniqprimer and Diagnostic Primers for the Broad-Host-Range Plant Pathogen Dickeya dianthicola.

A. Ben-Hur, J. Leach, L. Triplett, 2019, Plant disease.

Homology and functional similarity of an hrp-linked pathogenicity locus, dspEF, of Erwinia amylovora and the avirulence locus avrE of Pseudomonas syringae pathovar tomato.

A. Bogdanove, A. Charkowski, A. Collmer, 1998, Proceedings of the National Academy of Sciences of the United States of America.

The Erwinia chrysanthemi Type III Secretion System Is Required for Multicellular Behavior

Ching-Hong Yang, A. Charkowski, J. Barak, 2005, Journal of bacteriology.

Genomics of Plant-Associated Bacteria: The Soft Rot Enterobacteriaceae

A. Charkowski, J. Lind, Isael Rubio-Salazar, 2014 .

Bacterial Diseases of Potato

A. Charkowski, K. Sharma, J. Elphinstone, 2020, The Potato Crop.

Global Effect of Indole-3-Acetic Acid Biosynthesis on Multiple Virulence Factors of Erwinia chrysanthemi 3937

A. Ibekwe, Ching-Hong Yang, A. Charkowski, 2006, Applied and Environmental Microbiology.

Pseudomonas syringae Exchangeable Effector Loci: Sequence Diversity in Representative Pathovars and Virulence Function in P. syringae pv. syringae B728a

A. Charkowski, A. Collmer, W. Deng, 2003, Journal of bacteriology.

Soft Rot Disease Severity Is Affected by Potato Physiology and Pectobacterium taxa.

A. Charkowski, R. Groves, M. Marquez-Villavicencio, 2011, Plant disease.

The Dickeya dadantii biofilm matrix consists of cellulose nanofibres, and is an emergent property dependent upon the type III secretion system and the cellulose synthesis operon.

A. Charkowski, J. Barak, C. Jahn, 2011, Microbiology.

DNA MOLECULES AND POLYPEPTIDES OF PSEUDOMONAS SIRINGAE HRP PATHOGENICITY ISLAND AND THEIR USES: U.S. Patent No. US 6,852,835 B2

A. Charkowski, A. Collmer, J. Alfano, 2005 .

Potato , Viruses , and Seed Certification in the USA to Provide Healthy Propagated Tubers

A. Charkowski, J. Verchot, D. Halterman, 2012 .

Salmonella enterica Suppresses Pectobacterium carotovorum subsp. carotovorum Population and Soft Rot Progression by Acidifying the Microaerophilic Environment

A. Charkowski, J. Barak, Grace Kwan, 2013, mBio.

The role of cellulose and O-antigen capsule in the colonization of plants by Salmonella enterica.

A. Charkowski, J. Barak, D. Gibson, 2007, Molecular plant-microbe interactions : MPMI.

Diploid Potatoes as a Catalyst for Change in the Potato Industry

Jiming Jiang, A. Charkowski, D. Francis, 2022, American Journal of Potato Research.

Optimization of a Chemiluminescent Dot-Blot Immunoassay for Detection of Potato Viruses

A. Charkowski, R. Kota, Ana C. Fulladolsa Palma, 2013, American Journal of Potato Research.

Low-Cost Potato Tissue Culture with Microwave and Bleach Media Preparation and Sterilization

A. Charkowski, R. Witherell, B. Weber, 2015, American Journal of Potato Research.

Germplasm with Resistance to Potato virus Y Derived from Solanum chacoense: Clones M19 (39–7) and M20 (XD3)

A. Charkowski, S. Gray, J. Whitworth, 2019, American Journal of Potato Research.

Germplasm with Resistance to Potato virus Y Derived from Solanum chacoense: Clones M19 (39–7) and M20 (XD3)

A. Charkowski, S. Gray, J. Whitworth, 2019, American Journal of Potato Research.

Cross-contamination of lettuce with Escherichia coli O157:H7.

A. Charkowski, M. Wachtel, 2002, Journal of food protection.

Phylogenetic and Morphological Identification of the Novel Pathogen of Rheum palmatum Leaf Spot in Gansu, China

A. Charkowski, Yan Wang, Honggang Chen, 2016, Mycobiology.

Wrinkled alfalfa seeds harbor more aerobic bacteria and are more difficult to sanitize than smooth seeds.

A. Charkowski, C. Sarreal, R. Mandrell, 2001, Journal of food protection.

Interkingdom Signaling Interference: The Effect of Plant-Derived Small Molecules on Quorum Sensing in Plant-Pathogenic Bacteria.

H. Senderowitz, N. Khazanov, A. Charkowski, 2021, Annual review of phytopathology.

Direct binding of salicylic acid to Pectobacterium N-acyl-homoserine lactone synthase.

H. Senderowitz, N. Khazanov, S. Burdman, 2020, ACS chemical biology.

The 3-Hydroxy-2-Butanone Pathway Is Required for Pectobacterium carotovorum Pathogenesis

D. K. Willis, A. Charkowski, M. Marquez-Villavicencio, 2011, PloS one.

Reinventing potato as a diploid inbred line-based crop

Jiming Jiang, R. Veilleux, D. Spooner, 2016 .

Influence of Compaction and Subsoil Tillage on Soil Conditions and Pink Eye

A. Charkowski, A. Bussan, M. J. Drilias, 2008, American Journal of Potato Research.

The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants.

K. van Dijk, A. Charkowski, A. Collmer, 2000, Proceedings of the National Academy of Sciences of the United States of America.

Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

J. Glasner, N. Perna, P. Kiley, 2012, BMC Genomics.

Genome Sequence of the Plant-Pathogenic Bacterium Dickeya dadantii 3937

Frédéric Barras, Sheng Yang He, Martine Boccara, 2011, Journal of bacteriology.

The Type III Secreted Effector DspE Is Required Early in Solanum tuberosum Leaf Infection by Pectobacterium carotovorum to Cause Cell Death, and Requires Wx(3–6)D/E Motifs

D. K. Willis, Clifford S. Hogan, A. Charkowski, 2013, PloS one.

Species of Dickeya and Pectobacterium Isolated during an Outbreak of Blackleg and Soft Rot of Potato in Northeastern and North Central United States

Steven B. Johnson, A. Charkowski, N. Rosenzweig, 2021, Microorganisms.

Pectobacterium brasiliense (soft rot and blackleg of ornamentals and potato).

A. Charkowski, J. Joshi, Yuan Zeng, 2021, CABI Compendium.

Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains

N. Perna, A. Charkowski, B. Ma, 2009, Applied and Environmental Microbiology.

Potato Seed Systems

A. Charkowski, G. Forbes, E. Schulte-Geldermann, 2020 .

Low-Cost Potato Tissue Culture with Microwave and Bleach Media Preparation and Sterilization

A. Charkowski, R. Witherell, B. Weber, 2015, American Journal of Potato Research.

Underexplored Niches in Research on Plant Pathogenic Bacteria

C. Allen, A. Bent, A. Charkowski, 2009, Plant Physiology.

Salmonella enterica Virulence Genes Are Required for Bacterial Attachment to Plant Tissue

Jeri D. Barak, Pejman Naraghi-Arani, A. Charkowski, 2005, Applied and Environmental Microbiology.

Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries

K. Garrett, P. Kromann, P. Struik, 2016 .

Perspectives on the Transition From Bacterial Phytopathogen Genomics Studies to Applications Enhancing Disease Management: From Promise to Practice.

Youfu Zhao, A. Charkowski, G. Sundin, 2016, Phytopathology.

The Changing Face of Bacterial Soft-Rot Diseases.

A. Charkowski, 2018, Annual review of phytopathology.

Potato Seed Decay and Stand Loss is Not Caused by Dickeya Spread during Cutting and Handling of Seed Potatoes

A. Charkowski, G. Secor, V. Rivera-Varas, 2021, American Journal of Potato Research.

Complete Genome Sequence of Dickeya dianthicola ME23, a Pathogen Causing Blackleg and Soft Rot Diseases of Potato

Steven B. Johnson, J. Glasner, N. Perna, 2019, Microbiology Resource Announcements.

Integrated Control of Potato Pathogens Through Seed Potato Certification and Provision of Clean Seed Potatoes.

A. Charkowski, R. Groves, K. Frost, 2013, Plant disease.

Biology and control of Pectobacterium in potato

A. Charkowski, 2015, American Journal of Potato Research.

Potato Plants Grown from Minitubers are Delayed in Maturity and Lower in Yield, but are not at a Higher Risk of Potato virus Y Infection than Plants Grown from Conventional Seed

A. Charkowski, A. Fulladolsa, R. Groves, 2018, American Journal of Potato Research.

Application of Marker Assisted Selection for Potato Virus Y Resistance in the University of Wisconsin Potato Breeding Program

A. Charkowski, A. Fulladolsa, F. Navarro, 2015, American Journal of Potato Research.

Straw mulch increases potato yield and suppresses weeds in an organic production system

A. Charkowski, D. Rouse, R. Genger, 2018 .

Optimization of an isothermal recombinase polymerase amplification method for real-time detection of Potato virus Y O and N types in potato.

A. Charkowski, Lavanya Babujee, Aurélie M. Rakotondrafara, 2019, Journal of virological methods.

Jihyun F. Kim, A. Charkowski, A. Collmer, 1998 .

Metabolites from wild potato inhibit virulence factors of the soft rot and blackleg pathogen Pectobacterium brasiliense.

A. Heuberger, A. Charkowski, J. Joshi, 2020, Molecular plant-microbe interactions : MPMI.

SENSOR COMPONENTS FOR PCR DETECTION OF SALMONELLA IN ALFALFA SPROUT IRRIGATION WATER

E. Jackson, M. Delwiche, Jeri D. Barak, 2004 .

A Draft Genome Sequence Reveals the Helminthosporium solani Arsenal for Cell Wall Degradation

J. Glasner, A. Charkowski, Chakradhar Mattupalli, 2014, American Journal of Potato Research.

Evaluating Incidence of Helminthosporium solani and Colletotrichum coccodes on Asymptomatic Organic Potatoes and Screening Potato Lines for Resistance to Silver Scurf

A. Charkowski, R. Genger, Chakradhar Mattupalli, 2013, American Journal of Potato Research.

A gene in the Pseudomonas syringae pv. tomato Hrp pathogenicity island conserved effector locus, hopPtoA1, contributes to efficient formation of bacterial colonies in planta and is duplicated elsewhere in the genome.

A. Charkowski, A. Collmer, J. Badel, 2002, Molecular plant-microbe interactions : MPMI.

Harpin Mediates Cell Aggregation in Erwinia chrysanthemi 3937

Ching-Hong Yang, A. Charkowski, Yap Mee-Ngan, 2006, Journal of bacteriology.

Making sense of an alphabet soup: the use of a new bioinformatics tool for identification of novel gene islands. Focus on "identification of genomic islands in the genome of Bacillus cereus by comparative analysis with Bacillus anthracis".

A. Charkowski, 2004, Physiological genomics.

Altered localization of HrpZ in Pseudomonas syringae pv. syringae hrp mutants suggests that different components of the type III secretion pathway control protein translocation across the inner and outer membranes of gram-negative bacteria

A. Charkowski, A. Collmer, H. C. Huang, 1997, Journal of bacteriology.

The Plant Phenolic Compound p-Coumaric Acid Represses Gene Expression in the Dickeya dadantii Type III Secretion System

Ching-Hong Yang, A. Charkowski, Xin Chen, 2008, Applied and Environmental Microbiology.