M. Jayaram

发表

The 2microm-plasmid-encoded Rep1 and Rep2 proteins interact with each other and colocalize to the Saccharomyces cerevisiae nucleus

Y. Ahn, X. L. Wu, S. Biswal, 1997, Journal of bacteriology.

Junction Mobility and Resolution of Holliday Structures by Flp Site-specific Recombinase

Jehee Lee, M. Jayaram, J. Lee, 1995, The Journal of Biological Chemistry.

Phycomyces blakesleeanus TRP1 Gene: Organization and Functional Complementation in Escherichia coli and Saccharomyces cerevisiae

J. Revuelta, M. Jayaram, 1987, Molecular and cellular biology.

Segregation of the yeast plasmid: similarities and contrasts with bacterial plasmid partitioning.

S. Mehta, S. Velmurugan, M. Jayaram, 2004, Plasmid.

Localization and sequence analysis of yeast origins of DNA replication.

J. Broach, K. Nasmyth, J. Hicks, 1983, Cold Spring Harbor symposia on quantitative biology.

Hitchhiking on chromosomes: A persistence strategy shared by diverse selfish DNA elements.

M. Jayaram, Yen-Ting Liu, Soumitra Sau, 2019, Plasmid.

Transformation of Phycomyces blakesleeanus to G-418 resistance by an autonomously replicating plasmid.

J. Revuelta, M. Jayaram, 1986, Proceedings of the National Academy of Sciences of the United States of America.

A general model for site-specific recombination by the integrase family recombinases.

M. Jayaram, S. Pathania, Y. Voziyanov, 1999, Nucleic acids research.

Stable propagation of ‘selfish’ genetic elements

S. Velmurugan, M. Jayaram, Dina Uzri, 2007, Journal of Biosciences.

Mutations in a Partitioning Protein and Altered Chromatin Structure at the Partitioning Locus Prevent Cohesin Recruitment by the Saccharomyces cerevisiae Plasmid and Cause Plasmid Missegregation

S. Velmurugan, M. Jayaram, Dina Uzri, 2004, Molecular and Cellular Biology.

Properties of REP3: a cis-acting locus required for stable propagation of the Saccharomyces cerevisiae plasmid 2 microns circle

J. Broach, A. Sutton, M. Jayaram, 1985, Molecular and cellular biology.

Replacement of riboflavin by an analogue in the blue-light photoreceptor of Phycomyces.

R. M. Hamilton, M. Delbrück, M. Jayaram, 1981, Proceedings of the National Academy of Sciences of the United States of America.

Active-site assembly and mode of DNA cleavage by Flp recombinase during full-site recombination

I. Whang, M. Jayaram, J. Lee, 1994, Molecular and cellular biology.

Interactions of phage Mu enhancer and termini that specify the assembly of a topologically unique interwrapped transpososome.

M. Jayaram, R. Harshey, A. Suzuki, 2007, Journal of molecular biology.

Selfishness in moderation: evolutionary success of the yeast plasmid.

S. Velmurugan, M. Jayaram, S. Mehta, 2003, Current topics in developmental biology.

Yeast cohesin complex embraces 2 micron plasmid sisters in a tri-linked catenane complex

M. Jayaram, Chu-Chun Huang, S. Ghosh, 2009, Nucleic acids research.

Rapid localization and characterization of random mutations within the 2 micron circle site-specific recombinase: a general strategy for analysis of protein function.

M. Jayaram, N. S. Govind, 1987, Gene.

Co-segregation of yeast plasmid sisters under monopolin-directed mitosis suggests association of plasmid sisters with sister chromatids

M. Jayaram, Yen-Ting Liu, Chien-Hui Ma, 2013, Nucleic acids research.

DNA Recognition, Strand Selectivity, and Cleavage Mode during Integrase Family Site-specific Recombination*

T. Dandekar, Jehee Lee, Y. Ahn, 2000, The Journal of Biological Chemistry.

Mechanism of active site exclusion in a site-specific recombinase: role of the DNA substrate in conferring half-of-the-sites activity.

T. Tonozuka, M. Jayaram, J. Lee, 1997, Genes & development.

Functional Roles of Individual Recombinase Monomers in Strand Breakage and Strand Union during Site-specific DNA Recombination (*)

Jehee Lee, M. Jayaram, 1995, The Journal of Biological Chemistry.

Functional analysis of Box II mutations in yeast site-specific recombinases Flp and R. Significance of amino acid conservation within the Int family and the yeast sub-family.

I. Whang, M. Jayaram, H. Araki, 1992, Journal of molecular biology.

Functional analysis of box I mutations in yeast site-specific recombinases Flp and R: pairwise complementation with recombinase variants lacking the active-site tyrosine

J. W. Chen, M. Jayaram, H. Araki, 1992, Molecular and cellular biology.

Half-site strand transfer by step-arrest mutants of yeast site-specific recombinase Flp.

M. Jayaram, M. Serre, 1992, Journal of molecular biology.

Half-site recombinations mediated by yeast site-specific recombinases Flp and R.

M. Jayaram, H. Araki, Y. Oshima, 1992, Journal of molecular biology.

Site-specific recombinase, R, encoded by yeast plasmid pSR1.

M. Jayaram, H. Araki, Y. Oshima, 1992, Journal of molecular biology.

Tyr60 variants of Flp recombinase generate conformationally altered protein-DNA complexes. Differential activity in full-site and half-site recombinations.

J. W. Chen, M. Jayaram, L. Zheng, 1991, Journal of molecular biology.

Step-arrest mutants of FLP recombinase: implications for the catalytic mechanism of DNA recombination

M. Jayaram, R. Harshey, R. L. Parsons, 1988, Molecular and cellular biology.

The Dynamic Bacterial Genome: Introduction to site-specific recombination

M. Jayaram, I. Grainge, 2005 .

Domain of a yeast site-specific recombinase (Flp) that recognizes its target site.

J. W. Chen, D. Teplow, M. Jayaram, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Evolution of variants of yeast site-specific recombinase Flp that utilize native genomic sequences as recombination target sites

Jay H. Konieczka, A. Paek, J. Konieczka, 2006, Nucleic acids research.

Substrate recognition by the 2 micron circle site-specific recombinase: effect of mutations within the symmetry elements of the minimal substrate

M. Jayaram, L. Young, D. Horensky, 1986 .

Substrate recognition by the 2 micron circle site-specific recombinase: effect of mutations within the symmetry elements of the minimal substrate.

M. Jayaram, L. Young, D. Horensky, 1986, Molecular and cellular biology.

A Flp-SUMO hybrid recombinase reveals multi-layered copy number control of a selfish DNA element through post-translational modification

M. Jayaram, P. Guga, Chien-Hui Ma, 2019, PLoS genetics.

Impact of phopshate solubilizing bacteria (Bacillus polymixa) on drought tolerance of green gram [Vigna radiata (L.) Wilczek]

M. Jayaram, P. Vidya, V. P. Shintu, 2016 .

Mating type-like conversion promoted by the 2 micrograms circle site-specific recombinase: implications for the double-strand-gap repair model

M. Jayaram, 1986, Molecular and cellular biology.

Association of reciprocal exchange with gene conversion between the repeated segments of 2-micron circle.

M. Jayaram, 1986, Journal of molecular biology.

A high efficient method for introduction of exogenous genes into Phycomyces blakesleeanus

M. Jayaram, T. Ootaki, A. Miyazaki, 1991 .

4 The 2 micron plasmid of Saccharomyces cerevisiae: 5 A miniaturized selfish genome with optimized functional

M. Jayaram, Yen-Ting Liu, Soumitra Sau, 2013 .

Inducible expression of REP1 causes inducible expression of the 2 micron circle stability system

M. Jayaram, L. Young, S. Sumida, 1986, Current Genetics.

The 2μm Plasmid Stability System: Analyses of the Interactions among Plasmid- and Host-Encoded Components

Y. Ahn, S. Velmurugan, M. Jayaram, 1998, Molecular and Cellular Biology.

Positional Information within the Mu Transposase Tetramer: Catalytic Contributions of Individual Monomers

M. Jayaram, R. Harshey, Jin-Ying Yang, 1996, Cell.

DNA‐protein complexes during attachment‐site synapsis in Mu DNA transposition.

E. Getzoff, C. Kuo, M. Jayaram, 1991, The EMBO journal.

Mutational analysis of domain II beta of bacteriophage Mu transposase: domains II alpha and II beta belong to different catalytic complementation groups.

D. Giedroc, M. Jayaram, R. Harshey, 1998, Journal of Molecular Biology.

Step-arrest Mutants of Phage Mu Transposase

Keetae Kim, M. Jayaram, R. Harshey, 1995, The Journal of Biological Chemistry.

Stable persistence of the yeast plasmid by hitchhiking on chromosomes during vegetative and germ-line divisions of host cells

M. Jayaram, Yen-Ting Liu, Soumitra Sau, 2015, Mobile genetic elements.

Mathematical validation of a biological model for unlinking replication catenanes by recombination

M. Jayaram, 2013, Proceedings of the National Academy of Sciences.

A unique right end–enhancer complex precedes synapsis of Mu ends: the enhancer is sequestered within the transpososome throughout transposition

M. Jayaram, R. Harshey, S. Pathania, 2003, The EMBO journal.

A domain sharing model for active site assembly within the Mu A tetramer during transposition: the enhancer may specify domain contributions.

M. Jayaram, R. Harshey, K. Kim, 1995, The EMBO journal.

The Mu Transposase Interwraps Distant DNA Sites within a Functional Transpososome in the Absence of DNA Supercoiling*

M. Jayaram, R. Harshey, S. Pathania, 2005, Journal of Biological Chemistry.

Directed protein replacement in recombination full sites reveals trans‐horizontal DNA cleavage by Flp recombinase.

I. Whang, M. Jayaram, J. Lee, 1994, The EMBO journal.

Generality of the shared active site among yeast family site-specific recombinases. The R site-specific recombinase follows the Flp paradigm [corrected].

M. Jayaram, S. Yang, 1994, The Journal of biological chemistry.

Tests for the fractional active-site model in Flp site-specific recombination. Assembly of a functional recombination complex in half-site and full-site strand transfer.

J. W. Chen, M. Jayaram, S. Yang, 1993, The Journal of biological chemistry.

The Partitioning and Copy Number Control Systems of the Selfish Yeast Plasmid: An Optimized Molecular Design for Stable Persistence in Host Cells

Keng-Ming Chang, M. Jayaram, Paul A. Rowley, 2014, Microbiology spectrum.

Phytochemical investigations and antibacterial activity of Salacia oblonga Wall ethanolic extract

M. Jayaram, A. Giri, A. Musini, 2013 .

Protein-induced local DNA bends regulate global topology of recombination products.

Quan Du, A. Vologodskii, M. Jayaram, 2007, Journal of molecular biology.

The Mu Transpososome Through a Topological Lens

M. Jayaram, R. Harshey, 2006, Critical reviews in biochemistry and molecular biology.

Recombination within the yeast plasmid 2μ circle is site-specific

J. Broach, M. Jayaram, Vicki R. Guarascio, 1982, Cell.

Reactions of Cre with Methylphosphonate DNA: Similarities and Contrasts with Flp and Vaccinia Topoisomerase

M. Jayaram, Aashiq H. Kachroo, P. Guga, 2009, PloS one.

Light-induced carotene synthesis in Phycomyces

D. Presti, M. Delbrück, M. Jayaram, 1979 .

Holliday junction trap shows how cells use recombination and a junction-guardian role of RecQ helicase

J. A. Halliday, Jun Xia, S. Rosenberg, 2016, Science Advances.

Holliday junctions in FLP recombination: resolution by step-arrest mutants of FLP protein.

M. Jayaram, R. Harshey, R. L. Parsons, 1988, Proceedings of the National Academy of Sciences of the United States of America.

Disintegration promotes protospacer integration by the Cas1-Cas2 complex

M. Jayaram, Kamyab Javanmardi, I. Finkelstein, 2021, eLife.

Disintegration promotes proto-spacer integration by the Cas1-Cas2 complex

M. Jayaram, Kamyab Javanmardi, I. Finkelstein, 2020, bioRxiv.

Assembly and orientation of Flp recombinase active sites on two-, three- and four-armed DNA substrates: implications for a recombination mechanism.

I. Whang, M. Jayaram, J. Lee, 1996, Journal of molecular biology.

Keng-Ming Chang, M. Jayaram, Yen-Ting Liu, 2013, Biochemical Society transactions.

Site-specific recombination and partitioning systems in the stable high copy propagation of the 2-micron yeast plasmid.

S. Velmurugan, M. Jayaram, Dina Uzri, 2004, Progress in nucleic acid research and molecular biology.

Vectors for high-level, inducible expression of cloned genes in yeast.

J. Broach, M. Jayaram, Ling Wu, 1983 .

The 2μm Plasmid of Saccharomyces cerevisiae

S. Velmurugan, M. Jayaram, Y. Voziyanov, 2004 .

Site-Specific Recombination by the Flp Protein of Saccharomyces cerevisiae

M. Jayaram, G. Tribble, I. Grainge, 2002 .

Two-micrometer circle site-specific recombination: the minimal substrate and the possible role of flanking sequences.

M. Jayaram, 1985, Proceedings of the National Academy of Sciences of the United States of America.

An Overview of Tyrosine Site-specific Recombination: From an Flp Perspective.

M. Jayaram, Paul A. Rowley, Aashiq H. Kachroo, 2015, Microbiology spectrum.

Mechanisms for chromosome and plasmid segregation.

A. Paek, M. Jayaram, S. Ghosh, 2006, Annual review of biochemistry.

The 2 micron plasmid purloins the yeast cohesin complex

Clarence S. M. Chan, M. Dobson, S. Velmurugan, 2002, The Journal of cell biology.

Association of a centromere specific nucleosome with the yeast plasmid partitioning locus

M. Jayaram, 2011, Mobile genetic elements.

The selfish yeast plasmid utilizes the condensin complex and condensed chromatin for faithful partitioning

Anjali Mahilkar, M. Jayaram, Chien-Hui Ma, 2021, PLoS genetics.

Hitchhiking on condensed chromatin promotes plasmid persistence in yeast without perturbing chromosome function

M. Jayaram, Chien-Hui Ma, S. Ghosh, 2020, bioRxiv.

Stepwise manipulation of DNA specificity in Flp recombinase: progressively adapting Flp to individual and combinatorial mutations in its target site.

Jay H. Konieczka, A. F. Stewart, J. Konieczka, 2003, Journal of molecular biology.

Mutations that improve the binding of yeast FLP recombinase to its substrate.

P. Youderian, M. Jayaram, B. Lebreton, 1988, Genetics.

The yeast plasmid 2μ circle encodes components required for its high copy propagation

J. Broach, M. Jayaram, Y. Li, 1983, Cell.

Recombination of hybrid target sites by binary combinations of Flp variants: mutations that foster interprotomer collaboration and enlarge substrate tolerance.

Jay H. Konieczka, A. Paek, J. Konieczka, 2004, Journal of molecular biology.

The integrase family of recombinases: organization and function of the active site

M. Jayaram, I. Grainge, 1999, Molecular microbiology.

Mutations in the 2-microns circle site-specific recombinase that abolish recombination without affecting substrate recognition.

M. Jayaram, L. Young, P. V. Prasad, 1987, Proceedings of the National Academy of Sciences of the United States of America.

Cse4 (CenH3) Association with the Saccharomyces cerevisiae Plasmid Partitioning Locus in Its Native and Chromosomally Integrated States: Implications in Centromere Evolution

M. Jayaram, S. Ghosh, S. Hajra, 2010, Molecular and Cellular Biology.

The centromere-specific histone variant Cse4p (CENP-A) is essential for functional chromatin architecture at the yeast 2-μm circle partitioning locus and promotes equal plasmid segregation

M. Jayaram, S. Ghosh, S. Hajra, 2006, The Journal of cell biology.

A selfish DNA element engages a meiosis-specific motor and telomeres for germ-line propagation

D. Kaback, M. Conrad, M. Jayaram, 2014, The Journal of cell biology.

The selfish yeast plasmid uses the nuclear motor Kip1p but not Cin8p for its localization and equal segregation

H. Cui, M. Jayaram, S. Ghosh, 2009, The Journal of cell biology.

Path of DNA within the Mu Transpososome Transposase Interactions Bridging Two Mu Ends and the Enhancer Trap Five DNA Supercoils

M. Jayaram, R. Harshey, S. Pathania, 2002, Cell.

Residues within the N-terminal Domain of Human Topoisomerase I Play a Direct Role in Relaxation*

T. Straub, F. Boege, M. Jayaram, 2001, The Journal of Biological Chemistry.

Inhibition of Flp Recombinase by the Topoisomerase I-targeting Drugs, Camptothecin and NSC-314622*

M. Jayaram, B. Knudsen, M. Lisby, 2001, The Journal of Biological Chemistry.

Structural organization of the TRP1 gene of Phycomyces blakesleeanus: implications for evolutionary gene fusion in fungi.

J. Revuelta, M. Jayaram, C. Sadhu, 1988, Gene.

The 2μm Plasmid Causes Cell Death in Saccharomyces cerevisiae with a Mutation in Ulp1 Protease

M. Dobson, S. Velmurugan, M. Jayaram, 2005, Molecular and Cellular Biology.

Replication-dependent and independent mechanisms for the chromosome-coupled persistence of a selfish genome

Keng-Ming Chang, M. Jayaram, Yen-Ting Liu, 2016, Nucleic acids research.

Temporal sequence and cell cycle cues in the assembly of host factors at the yeast 2 micron plasmid partitioning locus

J. Yates, H. Cui, M. Jayaram, 2012, Nucleic acids research.

Remembering Max Delbrück: The scientist and the man

M. Jayaram, 1999 .

DNA sequence organization in Phycomyces blakesleeanus

M. Jayaram, R. Harshey, M. Chamberlin, 2004, Chromosoma.

Histone H3-variant Cse4-induced positive DNA supercoiling in the yeast plasmid has implications for a plasmid origin of a chromosome centromere

Keng-Ming Chang, H. Cui, M. Jayaram, 2011, Proceedings of the National Academy of Sciences.

A bipartite thermodynamic-kinetic contribution by an activating mutation to RDF-independent excision by a phage serine integrase

M. Jayaram, Paul A. Rowley, Chien-Hui Ma, 2020, Nucleic acids research.

Stereospecific suppression of active site mutants by methylphosphonate substituted substrates reveals the stereochemical course of site-specific DNA recombination

M. Jayaram, Paul A. Rowley, Aashiq H. Kachroo, 2015, Nucleic acids research.

Biochemical and Kinetic Analysis of the RNase Active Sites of the Integrase/Tyrosine Family Site-specific DNA Recombinases*

M. Jayaram, B. Knudsen, R. Frøhlich, 2001, The Journal of Biological Chemistry.

DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands

Jehee Lee, M. Jayaram, Jing-Wen Chen, 1992, Cell.

Alcoholysis and Strand Joining by the Flp Site-specific Recombinase

Jehee Lee, M. Jayaram, B. Knudsen, 1998, The Journal of Biological Chemistry.

The yeast site-specific recombinase Flp mediates alcoholysis and hydrolysis of the strand cleavage product: mimicking the strand-joining reaction with non-DNA nucleophiles.

M. Jayaram, B. Knudsen, O. Westergaard, 1997, Journal of molecular biology.

Electrostatic Suppression Allows Tyrosine Site-specific Recombination in the Absence of a Conserved Catalytic Arginine*

M. Jayaram, Paul A. Rowley, Aashiq H. Kachroo, 2010, The Journal of Biological Chemistry.

Symmetric DNA sites are functionally asymmetric within Flp and Cre site-specific DNA recombination synapses.

A. Vologodskii, M. Jayaram, R. Harshey, 2002, Journal of molecular biology.

DNA recombination and RNA cleavage activities of the Flp protein: roles of two histidine residues in the orientation and activation of the nucleophile for strand cleavage.

M. Jayaram, J. Lee, I. Grainge, 2001, Journal of molecular biology.

Geometry of site alignment during int family recombination: antiparallel synapsis by the Flp recombinase.

D. Buck, M. Jayaram, I. Grainge, 2000, Journal of molecular biology.

Resolution of tethered antiparallel and parallel holliday junctions by the Flp site-specific recombinase.

M. Jayaram, J. Lee, G. Tribble, 2000, Journal of molecular biology.

Wild‐type Flp recombinase cleaves DNA in trans

Jehee Lee, M. Jayaram, I. Grainge, 1999, The EMBO journal.

Unveiling two distinct ribonuclease activities and a topoisomerase activity in a site-specific DNA recombinase.

M. Jayaram, R. Harshey, J. Lee, 1998, Molecular cell.

A tetramer of the Flp recombinase silences the trimers within it during resolution of a Holliday junction substrate.

M. Jayaram, J. Lee, 1997, Genes & development.

Role of Partner Homology in DNA Recombination

M. Jayaram, Joonsoo Lee, 1995, The Journal of Biological Chemistry.

Mechanism of Site-Specific Recombination: The Flp Paradigm

M. Jayaram, 1994 .

Single-Molecule Tethered Particle Motion: Stepwise Analyses of Site-Specific DNA Recombination

M. Jayaram, Chien-Hui Ma, Hsiu-Fang Fan, 2018, Micromachines.

Single molecule TPM analysis of the catalytic pentad mutants of Cre and Flp site-specific recombinases: contributions of the pentad residues to the pre-chemical steps of recombination

M. Jayaram, Chien-Hui Ma, Hsiu-Fang Fan, 2015, Nucleic acids research.

Organization of DNA partners and strand exchange mechanisms during Flp site-specific recombination analyzed by difference topology, single molecule FRET and single molecule TPM.

R. Russell, A. Holzenburg, M. Jayaram, 2014, Journal of molecular biology.

The 2 micron plasmid of Saccharomyces cerevisiae: a miniaturized selfish genome with optimized functional competence.

M. Jayaram, Yen-Ting Liu, Soumitra Sau, 2013, Plasmid.

Real-time single-molecule tethered particle motion analysis reveals mechanistic similarities and contrasts of Flp site-specific recombinase with Cre and λ Int

M. Jayaram, Chien-Hui Ma, Hsiu-Fang Fan, 2013, Nucleic acids research.

Real-time single-molecule tethered particle motion analysis reveals mechanistic similarities and contrasts of Flp site-specific recombinase with Cre and j Int

M. Jayaram, Chien-Hui Ma, Hsiu-Fang Fan, 2013 .

Restoration of catalytic functions in Cre recombinase mutants by electrostatic compensation between active site and DNA substrate

M. Jayaram, Paul A. Rowley, Aashiq H. Kachroo, 2010, Nucleic acids research.

Active site electrostatics protect genome integrity by blocking abortive hydrolysis during DNA recombination

M. Jayaram, Paul A. Rowley, P. Guga, 2009, The EMBO journal.

Difference Topology: Analysis of High-Order DNA-Protin Assemblies

M. Jayaram, R. Harshey, 2009 .

Unveiling hidden catalytic contributions of the conserved His/Trp-III in tyrosine recombinases: assembly of a novel active site in Flp recombinase harboring alanine at this position.

M. Jayaram, Chien-Hui Ma, A. Kwiatek, 2007, Journal of molecular biology.

Flp Ribonuclease Activities

Y. Ahn, M. Jayaram, C. Xu, 1998, The Journal of Biological Chemistry.

Structural alterations and conformational dynamics in Holliday junctions induced by binding of a site-specific recombinase.

M. Jayaram, J. Lee, S. Pathania, 1998, Molecular cell.

Probing Flp: a new approach to analyze the structure of a DNA recognizing protein by combining the genetic algorithm, mutagenesis and non-canonical DNA target sites.

P Argos, P. Argos, T. Dandekar, 1997, Biochimica et biophysica acta.

Phosphoryl transfer in Flp recombination: a template for strand transfer mechanisms.

M. Jayaram, 1994, Trends in biochemical sciences.

Erratum: Identification of the active site tyrosine of Flp recombinase. Possible relevance of its location to the mechanism of recombination (Vol. 265 (1990) 18504-18510)

D. Teplow, M. Jayaram, R. L. Parsons, 1991 .

Identification of the active site tyrosine of Flp recombinase. Possible relevance of its location to the mechanism of recombination.

J. W. Chen, D. Teplow, M. Jayaram, 1990, The Journal of biological chemistry.

Split target specificity of ResT: a design for protein delivery, site selectivity and regulation of enzyme activity?

M. Jayaram, 2007, Molecular microbiology.

Mechanism of site-specific recombination. Logic of assembling recombinase catalytic site from fractional active sites.

M. Jayaram, J. Lee, 1993, The Journal of biological chemistry.

Functional analysis of Arg-308 mutants of Flp recombinase. Possible role of Arg-308 in coupling substrate binding to catalysis.

M. Jayaram, L. Zheng, R. L. Parsons, 1990, The Journal of biological chemistry.

The Cis-Trans Paradox of Integrase

M. Jayaram, 1997, Science.

Partitioning of the 2-μm Circle Plasmid of Saccharomyces cerevisiae

Clarence S. M. Chan, M. Dobson, S. Velmurugan, 2000, The Journal of Cell Biology.

Partitioning of the 2-microm circle plasmid of Saccharomyces cerevisiae. Functional coordination with chromosome segregation and plasmid-encoded rep protein distribution.

M. Dobson, S. Velmurugan, M. Jayaram, 2000, The Journal of cell biology.

Bending-incompetent variants of Flp recombinase mediate strand transfer in half-site recombinations: role of DNA bending in recombination.

J. W. Chen, H. Rosenfeldt, M. Jayaram, 1992, Gene.

Hexapeptides That Inhibit Processing of Branched DNA Structures Induce a Dynamic Ensemble of Holliday Junction Conformations*

R. Russell, Inga Jarmoskaite, M. Jayaram, 2015, The Journal of Biological Chemistry.

DNA-protein cooperativity in the assembly and stabilization of mu strand transfer complex. Relevance of DNA phasing and att site cleavage.

M. Jayaram, R. Harshey, K. Kim, 1994, Journal of molecular biology.

Single-molecule analysis of ϕC31 integrase-mediated site-specific recombination by tethered particle motion

M. Jayaram, T. Hsieh, Chien-Hui Ma, 2016, Nucleic acids research.

The selfish yeast plasmid exploits a SWI/SNF-type chromatin remodeling complex for hitchhiking on chromosomes and ensuring high-fidelity propagation

V. Iyer, M. Jayaram, Chien-Hui Ma, 2023, bioRxiv.

Analyses of the first chemical step in Flp site-specific recombination: Synapsis may not be a pre-requisite for strand cleavage.

I. Whang, M. Jayaram, J. Lee, 1996, Journal of molecular biology.

Faithful segregation of the multicopy yeast plasmid through cohesin-mediated recognition of sisters

M. Jayaram, S. Ghosh, S. Hajra, 2007, Proceedings of the National Academy of Sciences.

Flp Site-Specific Recombination System

M. Jayaram, 2013 .

The 2 micrometer plasmid stability system: analyses of the interactions among plasmid- and host-encoded components.

Y. Ahn, X. L. Wu, S. Velmurugan, 1998, Molecular and cellular biology.

Enhancer-independent variants of phage Mu transposase: enhancer-specific stimulation of catalytic activity by a partner transposase.

M. Jayaram, R. Harshey, J. Y. Yang, 1995, Genes & development.

Generality of the shared active site among yeast family site-specific recombinases. The ARg site-specific recombinase follows the Flp paradigm

M. Jayaram, Sang-Hwa Yang, 1994 .

An Overview of Tyrosine Site-specific Recombination: From an Flp Perspective