José Alquicira-Hernández

Rail-RNA: Scalable analysis of RNA-seq splicing and coverage

Leonardo Collado-Torres, Andrew E. Jaffe, Jeffrey T. Leek, 2015, bioRxiv.

Programmatic access to bacterial regulatory networks with regutools

Heladia Salgado, Leonardo Collado-Torres, José Alquicira-Hernández, 2020, Bioinform..

scPred: Cell type prediction at single-cell resolution

Hanlee P. Ji, Quan Nguyen, José Alquicira-Hernández, 2018, bioRxiv.