Alexandre Urzhumtsev

发表

REFINAMIENTO DE ESTRUCTURAS MACROMOLECULARES CRISTALOGRÁFICAS MACROMOLECULAR CRYSTALLOGRAPHIC STRUCTURE REFINEMENT

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2015 .

Program CRYC3D for geometric computing in crystallography

Alexandre Urzhumtsev, Ludmila Urzhumtseva, 2008 .

Some Applications of Dummy Point Scatterers for Phasing in Macromolecular X-Ray Crystallography

Pavel V. Afonine, Alexandre Urzhumtsev, Natalia Lunina, 2005, CompLife.

Tcl/Tk-based programs. IV. CALCRYS: crystallographic calculator

Alexandre Urzhumtsev, Ludmila Urzhumtseva, 2000 .

Electronic Reprint Applied Crystallography Automatic Multiple-zone Rigid-body Refinement with a Large Convergence Radius Pavel v. Afonine Et Al. · Automatic Multiple-zone Rigid-body Refinement Applied Crystallography Automatic Multiple-zone Rigid-body Refinement with a Large Convergence Radius

Paul D. Adams, Ralf W. Grosse-Kunstleve, Pavel V. Afonine, 2008 .

From deep TLS validation to ensembles of atomic models built from elemental motions. Addenda and corrigendum

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2016, Acta Crystallographica. Section D, Structural Biology.

COMPANG: automated comparison of orientations

Alexandre Urzhumtsev, Ludmila Urzhumtseva, 2002 .

Real-space refinement in PHENIX for cryo-EM and crystallography

Randy J Read, Thomas C Terwilliger, Alexandre Urzhumtsev, 2018, bioRxiv.

New tools for the analysis and validation of cryo-EM maps and atomic models

Thomas C Terwilliger, Alexandre Urzhumtsev, Paul D Adams, 2018, bioRxiv.

Multiple rotation function.

Alexandre Urzhumtsev, Ludmila Urzhumtseva, 2002, Acta crystallographica. Section D, Biological crystallography.

Direct phasing by binary integer programming.

Alexander Bockmayr, Alexandre Urzhumtsev, Vladimir Y Lunin, 2002, Acta crystallographica. Section A, Foundations of crystallography.

Programming new geometry restraints: parallelity of atomic groups

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2015, Journal of applied crystallography.

Connectivity-based ab initio phasing: from low resolution to a secondary structure.

Alexandre Urzhumtsev, Natalia Lunina, Vladimir Y Lunin, 2003, Acta crystallographica. Section D, Biological crystallography.

Direct low-resolution phasing from electron-density histograms in protein crystallography

Alexandre Urzhumtsev, A. Urzhumtsev, V. Lunin, 1990 .

FEM: feature-enhanced map

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2014, Acta crystallographica. Section D, Biological crystallography.

On macromolecular refinement at subatomic resolution with interatomic scatterers

Paul D. Adams, Ralf W. Grosse-Kunstleve, Pavel V. Afonine, 2007, Acta Crystallographica Section D: Biological Crystallography.

On the possibility of the observation of valence electron density for individual bonds in proteins in conventional difference maps.

Alexandre Urzhumtsev, Pavel V Afonine, Vladimir Y Lunin, 2004, Acta crystallographica. Section D, Biological crystallography.

FROG– high‐speed restraint–constraint refinement program for macromolecular structure

Alexandre Urzhumtsev, V. Yu. Lunin, E. A. Vernoslova, 1989 .

Phase Improvement in Protein Crystallography Using a Mixed Electron Density Model

Alexandre Urzhumtsev, V. Yu. Lunin, E. A. Vernoslova, 1985 .

From deep TLS validation to ensembles of atomic models built from elemental motions. II. Analysis of TLS refinement results by explicit interpretation

Alexandre Urzhumtsev, Paul D Adams, Pavel V Afonine, 2018, Acta crystallographica. Section D, Structural biology.

Metrics for comparison of crystallographic maps

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2014, Acta crystallographica. Section D, Biological crystallography.

The use of dummy atoms in X-ray macromolecular crystallography

Alexandre Urzhumtsev, V. Y. Lunin, A. Urzhumtsev, 2004 .

Advancing Methods for Biomolecular Crystallography

Randy J. Read, Alexandre Urzhumtsev, Vladimir Y. Lunin, 2013 .

short communications Acta Crystallographica Section D Biological

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 1998 .

New tools for the analysis and validation of cryo-EM maps and atomic models

Paul D. Adams, Pavel V. Afonine, Alexandre Urzhumtsev, 2018, bioRxiv.

On effective and optical resolutions of diffraction data sets.

Alexandre Urzhumtsev, Ludmila Urzhumtseva, A. Urzhumtsev, 2013, Acta crystallographica. Section D, Biological crystallography.

Improvement of protein phases by coarse model modification

Alexandre Urzhumtsev, A. Urzhumtsev, V. Lunin, 1984 .

To free or not to free?

Alexandre Urzhumtsev, 2014, Acta crystallographica. Section D, Biological crystallography.

Predicting X-ray Diffuse Scattering from Translation Libration Screw Structural Ensembles

Michael E. Wall, Nicholas K. Sauter, Paul D. Adams, 2015 .

From deep TLS validation to ensembles of atomic models built from elemental motions

Alexandre Urzhumtsev, Paul D Adams, Pavel V Afonine, 2015, bioRxiv.

phenix.model_vs_data: a high-level tool for the calculation of crystallographic model and data statistics

Paul D. Adams, Ralf W. Grosse-Kunstleve, Pavel V. Afonine, 2010, Journal of applied crystallography.

EFRESOL: effective resolution of a diffraction data set

Alexandre Urzhumtsev, Ludmila Urzhumtseva, 2015 .

The integrative role of cryo electron microscopy in molecular and cellular structural biology

Alexandre Urzhumtsev, Igor Orlov, Leonid Andronov, 2017, Biology of the cell.