J. Newby

发表

Stochastic models of intracellular transport

P. Bressloff, J. Newby, 2013 .

Path integrals and large deviations in stochastic hybrid systems.

Paul C Bressloff, Jay M Newby, P. Bressloff, 2014, Physical review. E, Statistical, nonlinear, and soft matter physics.

Stochastic hybrid model of spontaneous dendritic NMDA spikes

Paul C Bressloff, Jay M Newby, P. Bressloff, 2014, Physical biology.

Asymptotic and numerical methods for metastable events in stochastic gene networks

J. Newby, 2014, 1412.8446.

Breakdown of fast-slow analysis in an excitable system with channel noise.

Paul C Bressloff, James P Keener, Jay M Newby, 2013, Physical review letters.

Number 11 / 19 A perturbation analysis of spontaneous action potential initiation by stochastic ion channels by

J. Keener, J. Newby, 2011 .

Perturbation analysis of spontaneous action potential initiation by stochastic ion channels.

James P Keener, Jay M Newby, J. Keener, 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

Uniform asymptotic approximation of diffusion to a small target: Generalized reaction models.

Ava J. Mauro, S. Isaacson, J. Newby, 2016, Physical review. E.

First-Passage Time to Clear the Way for Receptor-Ligand Binding in a Crowded Environment.

J. Allard, J. Newby, 2016, Physical review letters.

Quasi-steady-state analysis of two-dimensional random intermittent search processes.

Paul C Bressloff, Jay M Newby, P. Bressloff, 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

LPS-binding IgG arrests actively motile Salmonella Typhimurium in gastrointestinal mucus

S. Lai, J. Newby, Alison Schaefer, 2020, Mucosal Immunology.

ZMapp Reinforces the Airway Mucosal Barrier Against Ebola Virus

Scott A. McKinley, K. Whaley, L. Zeitlin, 2018, The Journal of infectious diseases.

Quasi-steady State Reduction of Molecular Motor-Based Models of Directed Intermittent Search

P. Bressloff, J. Newby, 2010, Bulletin of mathematical biology.

Local synaptic signaling enhances the stochastic transport of motor-driven cargo in neurons

Paul C Bressloff, Jay Newby, P. Bressloff, 2010 .

Directed intermittent search for hidden targets

Paul C. Bressloff, Jay M. Newby, P. Bressloff, 2009 .

Directed intermittent search for a hidden target on a dendritic tree.

Paul C Bressloff, Jay M Newby, P. Bressloff, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

The Binding Site Barrier Elicited by Tumor-Associated Fibroblasts Interferes Disposition of Nanoparticles in Stroma-Vessel Type Tumors.

M. Milowsky, William Y. Kim, S. Wobker, 2016, ACS nano.

Technological strategies to estimate and control diffusive passage times through the mucus barrier in mucosal drug delivery☆

Martin Lysy, S. Lai, J. Newby, 2017, Advanced drug delivery reviews.

Hydrodynamics of transient cell-cell contact: The role of membrane permeability and active protrusion length

J. Lowengrub, J. Allard, E. Read, 2018, bioRxiv.

Partial demixing of RNA-protein complexes leads to intradroplet patterning in phase-separated biological condensates.

Jia Zhao, M. G. Forest, J. Newby, 2019, Physical review. E.

Limited processivity of single motors improves overall transport flux of self-assembled motor-cargo complexes.

S. Lai, M. G. Forest, J. Newby, 2019, Physical review. E.

Metastability in a Stochastic Neural Network Modeled as a Velocity Jump Markov Process

Paul C. Bressloff, Jay M. Newby, P. Bressloff, 2013, SIAM J. Appl. Dyn. Syst..

Spontaneous action potential initiation by fast and slow stochastic ion channels

P. Bressloff, J. Keener, J. Newby, 2013 .

Engineering Polymer-Binding Bispecific Antibodies for Enhanced Pretargeted Delivery of Nanoparticles to Mucus-Covered Epithelium.

S. Lai, J. Newby, Alison Schaefer, 2019, Angewandte Chemie.

Spatial heterogeneity of the cytosol revealed by machine learning-based 3D particle tracking

Erin M. Langdon, L. Holt, M. G. Forest, 2020, Molecular biology of the cell.

Personalized Virus Load Curves of SARS-CoV-2 Infection

T. Hillen, J. Newby, Carlos Contreras, 2021, bioRxiv.

Metastable behavior in Markov processes with internal states

J. Chapman, J. Newby, 2013, Journal of Mathematical Biology.

Personalized Virus Load Curves for Acute Viral Infections

T. Hillen, J. Newby, Carlos Contreras, 2021, Viruses.

Evidence that self-similar microrheology of highly entangled polymeric solutions scales robustly with, and is tunable by, polymer concentration.

Martin Lysy, P. Vasquez, D. Hill, 2018, 1810.06649.

Convolutional neural networks automate detection for tracking of submicron-scale particles in 2D and 3D

M Gregory Forest, Jay M Newby, Alison M Schaefer, 2017, Proceedings of the National Academy of Sciences.

Control of septin filament flexibility and bundling by subunit composition and nucleotide interactions

J. Newby, A. Gladfelter, Anum Khan, 2018, Molecular biology of the cell.

Number 11 / 13 Quasi-steady state analysis of two-dimensional random intermittent search processes by

P. Bressloff, J. Newby, 2011 .

HSP70 chaperones RNA-free TDP-43 into anisotropic intranuclear liquid spherical shells

J. Yates, E. Villa, J. Newby, 2020, Science.

Metastable switching in a planar limit cycle system with additive noise

Michael A. Schwemmer, Jay M. Newby, J. Newby, 2016 .

The Dynamics of Bistable Switching Behavior in Limit Cycle Systems with Additive Noise

Michael A. Schwemmer, J. Newby, M. Schwemmer, 2015, 1501.05688.

Molecular motor-based models of random intermittent search in dendrites

Jay Newby, J. Newby, 2010 .

Random intermittent search and the tug-of-war model of motor-driven transport

P. Bressloff, J. Newby, 2010 .

Directed intermittent search for hidden targets

P. Bressloff, J. Newby, 2009 .

Cooperative motility, force generation and mechanosensing in a foraging non-photosynthetic diatom

Andrew J. Alverson, G. Jedd, J. Newby, 2023, bioRxiv.

Metastable behavior in Markov processes with internal states

J. Chapman, J. Newby, 2013, Journal of mathematical biology.

Modeling the Mechanisms by Which Coexisting Biomolecular RNA–Protein Condensates Form

M. Forest, J. Newby, A. Gladfelter, 2020, Bulletin of Mathematical Biology.

3D neural network-based particle tracking reveals spatial heterogeneity of the cytosol

Erin M. Langdon, L. Holt, M. G. Forest, 2019, bioRxiv.

Isolating intrinsic noise sources in a stochastic genetic switch

Jay M Newby, J. Newby, 2011, Physical biology.

An Asymptotic Analysis of the Spatially Inhomogeneous Velocity-Jump Process

James P. Keener, Jay M. Newby, J. Keener, 2011, Multiscale Model. Simul..

Modeling Barrier Properties of Intestinal Mucus Reinforced with IgG and Secretory IgA against Motile Bacteria.

S. Lai, M. G. Forest, J. Newby, 2019, ACS infectious diseases.

Measurement error correction in particle tracking microrheology

Martin Lysy, David B. Hill, M. Gregory Forest, 2019, The Annals of Applied Statistics.

A blueprint for robust crosslinking of mobile species in biogels with weakly adhesive molecular anchors

S. Lai, M. G. Forest, J. Newby, 2017, Nature Communications.

Uniform asymptotic approximation of diffusion to a small target.

Jay Newby, S. Isaacson, J. Newby, 2013, Physical review. E, Statistical, nonlinear, and soft matter physics.

TDP-43 and HSP70 phase separate into anisotropic, intranuclear liquid spherical annuli

J. Yates, E. Villa, J. Newby, 2020, bioRxiv.

Filling of a Poisson trap by a population of random intermittent searchers.

Paul C Bressloff, Jay M Newby, P. Bressloff, 2012, Physical review. E, Statistical, nonlinear, and soft matter physics.

Control of septin filament flexibility and bundling

J. Newby, A. Gladfelter, Anum Khan, 2017, bioRxiv.

A computational model for the cancer field effect

T. Hillen, J. Newby, K. Deutscher, 2023, Frontiers Artif. Intell..

Spontaneous Excitability in the Morris-Lecar Model with Ion Channel Noise

Jay M. Newby, J. Newby, 2014, SIAM J. Appl. Dyn. Syst..

MEASUREMENT ERROR CORRECTION IN PARTICLE TRACKING MICRORHEOLOGY

Martin Lysy, D. Hill, M. G. Forest, 2021 .

Bistable switching asymptotics for the self regulating gene

J. Newby, 2014, 1407.4344.

Local synaptic signaling enhances the stochastic transport of motor-driven cargo in neurons

P. Bressloff, J. Newby, 2010 .

Local synaptic signaling enhances the stochastic transport of motor-driven cargo in neurons

P. Bressloff, J. Newby, 2010, Physical biology.

Partial demixing of RNA-protein complexes leads to intradroplet patterning in phase-separated biological condensates.

Jia Zhao, J. Newby, A. Gladfelter, 2019, Physical review. E.

Random intermittent search and the tug-of-war model of motor-driven transport

P. Bressloff, J. Newby, 2010 .