V. Spassov

发表

Multiple‐site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach

D. Bashford, V. Spassov, 1999 .

Electrostatic coupling to pH‐titrating sites as a source of cooperativity in protein‐ligand binding

D. Bashford, V. Spassov, D Bashford, 1998, Protein science : a publication of the Protein Society.

LOOPER: a molecular mechanics-based algorithm for protein loop prediction.

Lisa Yan, Lisa Yan, P. Flook, 2008, Protein engineering, design & selection : PEDS.

pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin.

D. Bashford, K. Gerwert, H. Luecke, 2001, Journal of molecular biology.

A fast and accurate computational approach to protein ionization

Lisa Yan, V. Spassov, Velin Z. Spassov, 2008, Protein science : a publication of the Protein Society.

Electrostatic interactions in proteins. A theoretical analysis of lysozyme ionization

Boris P. Atanasov, Velin Z. Spassov, B. Atanasov, 1989 .

Optimization of the electrostatic interactions in proteins of different functional and folding type

A. Karshikoff, R. Ladenstein, V. Spassov, 1994, Protein science : a publication of the Protein Society.

The dominant role of side‐chain backbone interactions in structural realization of amino acid code. ChiRotor: A side‐chain prediction algorithm based on side‐chain backbone interactions

Lisa Yan, Lisa Yan, P. Flook, 2007, Protein science : a publication of the Protein Society.

Electrostatic properties of two porin channels from Escherichia coli.

A. Karshikoff, R. Ladenstein, S. Cowan, 1994, Journal of molecular biology.

Urea unfolding and stability of gamma-II crystallin.

B. Atanasov, V. Spassov, P. Christova, 1993, Journal of photochemistry and photobiology. B, Biology.

Fully Automated Molecular Mechanics Based Induced Fit Protein—Ligand Docking Method.

Lisa Yan, C. M. Venkatachalam, Nic Austin, 2009 .

The optimization of protein‐solvent interactions: Thermostability and the role of hydrophobic and electrostatic interactions

A. Karshikoff, R. Ladenstein, V. Spassov, 1995, Protein science : a publication of the Protein Society.

Optimization of the electrostatic interactions between ionized groups and peptide dipoles in proteins

A. Karshikoff, R. Ladenstein, V. Spassov, 1997, Protein science : a publication of the Protein Society.

pH-selective mutagenesis of protein–protein interfaces: In silico design of therapeutic antibodies with prolonged half-life

Lisa Yan, Lisa Yan, V. Spassov, 2012, Proteins.

Introducing an Implicit Membrane in Generalized Born/Solvent Accessibility Continuum Solvent Models

Velin Z. Spassov, Sándor Szalma, V. Spassov, 2002 .

Multiple-site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach

Donald Bashford, Velin Z. Spassov, D. Bashford, 1999, J. Comput. Chem..

A pH‐dependent computational approach to the effect of mutations on protein stability

Lisa Yan, Velin Z. Spassov, Lisa Yan, 2016, J. Comput. Chem..

A fast and accurate computational approach to protein ionization

Lisa Yan, V. Spassov, 2008, Protein science : a publication of the Protein Society.

Fully Automated Molecular Mechanics Based Induced Fit Protein-Ligand Docking Method

Lisa Yan, Nic Austin, Jürgen Koska, 2008, J. Chem. Inf. Model..

Structural modeling and electrostatic properties of aspartate transcarbamylase from Saccharomyces cerevisiae

B. Atanasov, B. Villoutreix, G. Hervé, 1994, Proteins.

pK(a) Calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin.

D. Bashford, K. Gerwert, H. Luecke, 2001, Journal of molecular biology.

Spatial optimization of electrostatic interactions between the ionized groups in globular proteins

B. Atanasov, V. Spassov, Velin Z. Spassov, 1994, Proteins.

Computer simulation of excitation-contraction coupling in cardiac muscle. A study of the regulatory role of calcium binding to troponin C.

A. Michailova, V. Spassov, A Michailova, 1997, General physiology and biophysics.

Theoretical model and computer simulation of excitation-contraction coupling of mammalian cardiac muscle.

Velin Z. Spassov, V. Spassov, Anushka P. Michailova, 1992, Journal of molecular and cellular cardiology.

Two physics‐based models for pH‐dependent calculations of protein solubility

Lisa Yan, V. Spassov, H. Kemmish, 2022, Protein science : a publication of the Protein Society.