Alessandro Rigano

An algorithm-centric Monte Carlo method to empirically quantify motion type estimation uncertainty in single-particle tracking

Ivo F. Sbalzarini, Krzysztof Gonciarz, Alessandro Rigano, 2018, bioRxiv.

Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model

Carlas S. Smith, D. Sudar, D. Grunwald, 2021, Nature Methods.

Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications

D. Grunwald, R. Nitschke, Marco Marcello, 2021, Nature Methods.

OMEGA: a software tool for the management, analysis, and dissemination of intracellular trafficking data that incorporates motion type classification and quality control

Ivo F. Sbalzarini, Tiziano Leidi, Jeremy Luban, 2018, bioRxiv.

Example Microscopy Metadata JSON files produced using Micro-Meta App to document the acquisition of example images using the custom-built TIRF Epifluorescence Structured Illumination Microscope

Caterina Strambio-De-Castillia, Alessandro Rigano, Karl A. Bellvé, 2021 .

4DN-BINA-OME (NBO) Tiered Microscopy Metadata Specifications - v2.01 - XSD schema

Caterina Strambio-De-Castillia, Alessandro Rigano, Alessandro Rigano, 2021 .

eScholarship@UMassChan eScholarship@UMassChan

I. Sbalzarini, Alessandro Rigano, Vanni Galli, 2021 .