D. Rau

发表

Solid-to-fluid DNA transition inside HSV-1 capsid close to the temperature of infection.

F. Homa, X. Zuo, A. Evilevitch, 2014, Nature chemical biology.

Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

B. Lee, V. Parsegian, D. Rau, 1984, Proceedings of the National Academy of Sciences of the United States of America.

Attractive forces between cation condensed DNA double helices.

T. Thomas, V. Parsegian, A. Shirahata, 2008, Biophysical journal.

Protein solvation in allosteric regulation: a water effect on hemoglobin.

V. Parsegian, D. Rau, M. F. Colombo, 1992, Science.

Stabilizing Labile DNA-Protein Complexes in Polyacrylamide Gels

D. Rau, N. Sidorova, Stevephen Hung, 2012 .

Differences in Hydration Coupled to Specific and Nonspecific Competitive Binding and to Specific DNA Binding of the Restriction Endonuclease BamHI*

D. Rau, N. Sidorova, Shakir Muradymov, 2006, Journal of Biological Chemistry.

The Role of Water in the EcoRI-DNA Binding

D. Rau, N. Sidorova, 2004 .

Hydration forces.

V. Parsegian, S. Leikin, D. Rau, 1993, Annual review of physical chemistry.

Solvent hydrogen-bond network in protein self-assembly: solvation of collagen triple helices in nonaqueous solvents.

V. Parsegian, S. Leikin, D. Rau, 1997, Biophysical journal.

DNA--DNA interactions.

R. Podgornik, H. Strey, V. Parsegian, 1998, Current opinion in structural biology.

Direct measurement of forces between linear polysaccharides xanthan and schizophyllan.

V. Parsegian, D. Rau, 1990, Science.

The action of interhelical forces on the organization of DNA double helixes: fluctuation-enhanced decay of electrostatic double-layer and hydration forces

R. Podgornik, V. Parsegian, D. Rau, 1989 .

Changes in Erythrocyte Membranes during Cold Storage of Whole Blood

D. Rau, G. Moore, R. S. Antonoff, 1972, Vox sanguinis.

Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces.

V A Parsegian, V. Parsegian, D. Rau, 1992, Biophysical journal.

Role of Disulfide Bonds on DNA Packaging Forces in Bull Sperm Chromatin.

J. DeRouchey, D. Rau, J. Hutchison, 2017, Biophysical journal.

Role of Amino Acid Insertions on Intermolecular Forces between Arginine Peptide Condensed DNA Helices

J. DeRouchey, D. Rau, 2011, The Journal of Biological Chemistry.

Salt effects on condensed protamine-DNA assemblies: anion binding and weakening of attraction.

J. DeRouchey, D. Rau, 2011, The journal of physical chemistry. B.

Preferential hydration of DNA: the magnitude and distance dependence of alcohol and polyol interactions.

D. Rau, Christopher Stanley, 2006, Biophysical journal.

Exclusion of alcohols from spermidine-DNA assemblies: probing the physical basis of preferential hydration.

D. Rau, A. Hultgren, 2004, Biochemistry.

DNA-DNA interactions Helmut H Strey*t, Rudi Podgornik* , Parsegian

D. Rau, V. Adrian, 1998 .

The flexibility of A-form DNA.

D. Rau, E. Charney, H. H. Chen, 1991, Journal of biomolecular structure & dynamics.

Temperature‐controlled vacuum chamber for x‐ray diffraction studies

A. Parsegian, D. Rau, C. Mudd, 1987 .

Macromolecules and water: probing with osmotic stress.

V. Parsegian, D. Rau, R. Rand, 1995, Methods in enzymology.

Linkage of EcoRI dissociation from its specific DNA recognition site to water activity, salt concentration, and pH: separating their roles in specific and non-specific binding.

D. Rau, N. Sidorova, 2001, Journal of molecular biology.

Direct measurement of temperature-dependent solvation forces between DNA double helices.

V. Parsegian, D. Rau, 1992, Biophysical journal.

Differences in water release for the binding of EcoRI to specific and nonspecific DNA sequences.

D. Rau, N. Sidorova, Donald C. RAUt, 1996, Proceedings of the National Academy of Sciences of the United States of America.

The B form to Z form transition of poly(dG-m5dC) is sensitive to neutral solutes through an osmotic stress.

D. Rau, M. F. Colombo, R. S. Preisler, 1995, Biochemistry.

Watching molecules crowd: DNA double helices under osmotic stress.

R. Podgornik, H. Strey, V. Parsegian, 1995, Biophysical chemistry.

Anions and Cations

R. Podgornik, V. Parsegian, D. Rau, 2005 .

Zinc induces a bend within the transcription factor IIIA-binding region of the 5 S RNA gene.

J. Nickol, D. Rau, 1992, Journal of molecular biology.

Variation in hydration forces between neutral phospholipid bilayers: evidence for hydration attraction.

V. Parsegian, D. Rau, R. Rand, 1988, Biochemistry.

Effects of salt concentrations and bending energy on the extent of ejection of phage genomes.

W. Gelbart, C. Knobler, A. Evilevitch, 2008, Biophysical journal.

The flexibility of alternating dA-dT sequences.

D. Rau, E. Charney, H. H. Chen, 1985, Journal of biomolecular structure & dynamics.

Reevaluation of chloride's regulation of hemoglobin oxygen uptake: the neglected contribution of protein hydration in allosterism.

V. Parsegian, D. Rau, M. F. Colombo, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Comparison of polyelectrolyte theories of the binding of cations to DNA.

R. W. Wilson, V. Bloomfield, D. Rau, 1980, Biophysical journal.

Electric dichroism of DNA. Influence of the ionic environment on the electric polarizability.

D. Rau, E. Charney, 1983, Biophysical chemistry.

Length changes in solution accompanying the B-Z transition of poly (dG-m5dC) induced by Co(NH3)63+.

D. Rau, E. Charney, H. H. Chen, 1982, Nucleic acids research.

Bond orientational order, molecular motion, and free energy of high-density DNA mesophases.

R. Podgornik, H. Strey, V. Parsegian, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Intracellular osmotic action

V. Parsegian, D. Rau, R. Rand, 2000, Cellular and Molecular Life Sciences CMLS.

Measuring the interaction of urea and protein-stabilizing osmolytes with the nonpolar surface of hydroxypropylcellulose.

D. Rau, Christopher Stanley, 2008, Biochemistry.

Temperature-favoured assembly of collagen is driven by hydrophilic not hydrophobic interactions

V. Parsegian, S. Leikin, D. Rau, 1995, Nature Structural Biology.

The osmotic sensitivity of netropsin analogue binding to DNA

D. Rau, N. Sidorova, 1995, Biopolymers.

[3] Macromolecules and water: Probing with osmotic stress

V. Parsegian, D. Rau, R. Rand, 1995 .

Solutes probe hydration in specific association of cyclodextrin and adamantane.

D. Harries, V. Parsegian, D. Rau, 2005, Journal of the American Chemical Society.

Structural information from electric dichroism measurements of DNA and alternating GC nucleic acids in solution: The question of base tilt

E. Henry, D. Rau, E. Charney, 1986, Biopolymers.

A comparison of DNA compaction by arginine and lysine peptides: a physical basis for arginine rich protamines.

J. DeRouchey, D. Rau, Brandon M Hoover, 2013, Biochemistry.

Histone hyperacetylation has little effect on the higher order folding of chromatin.

G. Felsenfeld, J. McGhee, J. Nickol, 1983, Nucleic acids research.

Orientation of the nucleosome within the higher order structure of chromatin

G. Felsenfeld, J. McGhee, D. Rau, 1980, Cell.

Interplay of ion binding and attraction in DNA condensed by multivalent cations

Brian A. Todd, D. Rau, B. Todd, 2007, Nucleic acids research.

Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

V A Parsegian, V. Parsegian, D. Rau, 2000, Proceedings of the National Academy of Sciences of the United States of America.

Flexibility of Acanthamoeba myosin rod minifilaments.

M. Zółkiewski, A. Ginsburg, J. Hammer, 1999, Biochemistry.

Critical amount of oligovalent ion binding required for the B-Z transition of poly (dG-m5dC).

M. Behe, D. Rau, H. H. Chen, 1984, Nucleic acids research.

Structure of the DNA gyrase-DNA complex as revealed by transient electric dichroism.

M. Gellert, D. Rau, A. Maxwell, 1987, Journal of molecular biology.

Higher order structure in a short repeat length chromatin

J. Allan, D. Rau, N. Harborne, 1984, The Journal of cell biology.

The high-field saturation properties of the ion atmosphere polarization surrounding a rigid, immobile rod

D. Rau, E. Charney, 1983 .

Higher order structure of chromatin: Orientation of nucleosomes within the 30 nm chromatin solenoid is independent of species and spacer length

G. Felsenfeld, J. McGhee, J. Nickol, 1983, Cell.

Participation of core histone "tails" in the stabilization of the chromatin solenoid

J. Allan, D. Rau, N. Harborne, 1982, The Journal of cell biology.

The high mobility group proteins HMG 14 and 17, do not prevent the formation of chromatin higher order structure.

G. Felsenfeld, J. McGhee, D. Rau, 1982, Nucleic acids research.

Polarization of the ion atmosphere of a charged cylinder.

D. Rau, E. Charney, 1981, Biophysical chemistry.

Water release associated with specific binding of gal repressor.

D. Rau, M M Garner, D C Rau, 1995, The EMBO journal.

Osmotic stress for the direct measurement of intermolecular forces.

V. Parsegian, D. Rau, R. Rand, 1986, Methods in enzymology.

Polyelectrolyte effects in DNA condensation by polyamines.

R. W. Wilson, V. Bloomfield, D. Rau, 1980, Biophysical chemistry.

Nucleotides Increase the Internal Flexibility of Filaments of Dephosphorylated Acanthamoeba Myosin II (*)

D. Rau, E. Korn, M. Rędowicz, 1996, The Journal of Biological Chemistry.

Electric birefringence study of the solution structure of chymotrypsin-cleaved Acanthamoeba myosin II.

S. Wijmenga, D. Rau, E. Korn, 1987, The Journal of biological chemistry.

Solid-to-fluid–like DNA transition in viruses facilitates infection

G. Lander, X. Zuo, A. Evilevitch, 2014, Proceedings of the National Academy of Sciences.

Protein structure and hydration probed by SANS and osmotic stress.

S. Krueger, V. Parsegian, D. Rau, 2008, Biophysical journal.

DNA bending-induced phase transition of encapsidated genome in phage λ

John E. Johnson, G. Lander, B. Carragher, 2013, Nucleic acids research.

Incomplete ion dissociation underlies the weakened attraction between DNA helices at high spermidine concentrations.

Jie Yang, D. Rau, 2005, Biophysical journal.

Transient electric birefringence of T7 viral DNA

V. Bloomfield, D. Rau, 1979, Biopolymers.

Trapping DNA–protein binding reactions with neutral osmolytes for the analysis by gel mobility shift and self-cleavage assays

D. Rau, N. Sidorova, Shakir Muradymov, 2005, Nucleic acids research.

Evidence for water structuring forces between surfaces.

D. Rau, Christopher Stanley, 2011, Current opinion in colloid & interface science.

Divalent counterion-induced condensation of triple-strand DNA

X. Qiu, V. Parsegian, D. Rau, 2010, Proceedings of the National Academy of Sciences.

Cation charge dependence of the forces driving DNA assembly.

J. DeRouchey, V. Parsegian, D. Rau, 2010, Biophysical journal.

Hydration forces underlie the exclusion of salts and of neutral polar solutes from hydroxypropylcellulose.

S. Mizrahi, V. Parsegian, D. Rau, 2005, The journal of physical chemistry. B.

Water near intracellular surfaces

V. Parsegian, D. Rau, 1984, The Journal of cell biology.

Parametrization of direct and soft steric-undulatory forces between DNA double helical polyelectrolytes in solutions of several different anions and cations.

V A Parsegian, R. Podgornik, V. Parsegian, 1994, Biophysical journal.

Chromatin Higher Order Structure and Gene Expression

G. Felsenfeld, J. McGhee, J. Nickol, 1983 .

Competition between netropsin and restriction nuclease EcoRI for DNA binding.

D. Rau, Sidorova NYu, P. Gazoni, 1995, Journal of biomolecular structure & dynamics.

A unified theory of nucleation-rate-limited DNA renaturation kinetics.

D. Rau, L. Klotz, 1978, Biophysical chemistry.

Mechanistic studies of dna gyrase

M. Gellert, D. Rau, A. Maxwell, 1986 .

A more complete kinetic theory of DNA renaturation

D. Rau, L. Klotz, 1975 .

Solution parameters modulating DNA binding specificity of the restriction endonuclease EcoRV

D. Rau, Donald C Rau, N. Sidorova, 2011, The FEBS journal.

Salt-dependent DNA-DNA spacings in intact bacteriophage λ reflect relative importance of DNA self-repulsion and bending energies.

Xiangyun Qiu, V Adrian Parsegian, William M Gelbart, 2011, Physical review letters.

The Relationship Between Hemoglobin Function and Membrane Integrity in Erythrocytes During Cold Storage

D. Rau, J. H. Harrison, G. Moore, 1972, Transfusion.

DNA concentration-dependent dissociation of EcoRI: direct transfer or reaction during hopping.

D. Rau, N. Sidorova, T. Scott, 2013, Biophysical journal.

Swelling from the Perspective of Molecular Assemblies and Single Functioning Biomolecules

V. Parsegian, D. Rau, R. Rand, 1992 .

Direct measurement of forces between self-assembled proteins: temperature-dependent exponential forces between collagen triple helices.

V. Parsegian, S. Leikin, D. Rau, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Using single-turnover kinetics with osmotic stress to characterize the EcoRV cleavage reaction.

D. Rau, N. Sidorova, Rocco Ferrandino, 2014, Biochemistry.

Molecular mechanism for the preferential exclusion of TMAO from protein surfaces.

George I Makhatadze, Angel E Garcia, G. Makhatadze, 2012, The journal of physical chemistry. B.

Stabilizing labile DNA–protein complexes in polyacrylamide gels

D. Rau, N. Sidorova, Stevephen Hung, 2010, Electrophoresis.

Sequestered water and binding energy are coupled in complexes of lambda Cro repressor with non-consensus binding sequences.

D. Rau, 2006, Journal of molecular biology.

The dissociation rate of the EcoRI-DNA-specific complex is linked to water activity.

D. Rau, N. Sidorova, 2000, Biopolymers.

Higher Orders of Chromatin Structure

G. Felsenfeld, J. McGhee, D. Rau, 1983 .

Removing water from an EcoRI-noncognate DNA complex with osmotic stress.

D. Rau, N. Sidorova, 1999, Journal of biomolecular structure & dynamics.

Differences between EcoRI nonspecific and "star" sequence complexes revealed by osmotic stress.

D. Rau, N. Sidorova, 2004, Biophysical journal.

Participation of core histone "tails" in the stabilization of the chromatin solenoid

J. Allan, D. Rau, N. Harborne, 1982, The Journal of cell biology.

Molecular mechanism for the preferential exclusion of TMAO from protein surfaces.

G. Makhatadze, A. Garcia, D. Rau, 2012, Journal of Physical Chemistry B.

Measurement of forces between galactomannan polymer chains: Effect of hydrogen bonding

A. Y. Cheng, R. Prud’homme, D. Rau, 2002 .