A. Meyer

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Geometric constraints dominate the antigenic evolution of 1 influenza H 3 N 2 hemagglutinin 2

Austin G. Meyer, Claus O. Wilke, C. Wilke, 2015 .

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

David B. Knoester, Jeffrey E. Barrick, Daniel E. Deatherage, 2014, BMC Genomics.

Predicting Growth Conditions from Internal Metabolic Fluxes in an In-Silico Model of E. coli

Jeffrey E. Barrick, Pradeep Ravikumar, C. Wilke, 2014, bioRxiv.

Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Austin G. Meyer, Claus O. Wilke, Edward M. Marcotte, 2015, Science.

Predicting bacterial growth conditions from bacterial physiology

Jeffrey E. Barrick, Pradeep Ravikumar, C. Wilke, 2014 .

Predicting growth conditions from internal metabolic fluxes in an in-Silico model of E. Coli

Pradeep Ravikumar, C. Wilke, J. Barrick, 2014, bioRxiv.

Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin

Claire D. McWhite, C. Wilke, A. Meyer, 2016, bioRxiv.

Current data show no signal of Ebola virus adapting to humans

Stephanie J. Spielman, C. Wilke, A. Meyer, 2014, bioRxiv.

Functional Sites Induce Long-Range Evolutionary Constraints in Enzymes

Benjamin R. Jack, Benjamin R Jack, C. Wilke, 2016, PLoS biology.

Analysis of infection biomarkers within a Bayesian framework reveals their role in pneumococcal pneumonia diagnosis in HIV patients

A. Meyer, 2016, bioRxiv.

Alternate splicing of dysferlin C2A confers Ca²⁺-dependent and Ca²⁺-independent binding for membrane repair.

A. Meyer, R B Sutton, A. Hinderliter, 2014, Structure.

Computational and Functional Analysis of the Virus-Receptor Interface Reveals Host Range Trade-Offs in New World Arenaviruses

Eleisha L. Jackson, C. Wilke, A. Ellington, 2015, Journal of Virology.

Modeling coding-sequence evolution within the context of residue solvent accessibility

Claus O Wilke, C. Wilke, A. Meyer, 2012, BMC Evolutionary Biology.

Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design

Eric T. Dawson, Stephanie J. Spielman, Dariya K. Sydykova, 2014, bioRxiv.

Maximum Allowed Solvent Accessibilites of Residues in Proteins

Austin G. Meyer, Claus O. Wilke, Stephanie J. Spielman, 2012, PloS one.

Computational tests of a thermal cycling strategy to isolate more complex functional nucleic acid motifs from random sequence pools by in vitro selection

Austin G. Meyer, Aaron Reba, Jeffrey E. Barrick, 2012, ALIFE.

Integrating sequence variation and protein structure to identify sites under selection.

Claus O Wilke, C. Wilke, A. Meyer, 2013, Molecular biology and evolution.

Serial passaging causes extensive positive selection in seasonal influenza A 4 hemagglutinin 5

Claire D. McWhite, C. Wilke, A. Meyer, 2016 .

Time dependence of evolutionary metrics during the 2009 pandemic influenza virus outbreak

Stephanie J. Spielman, C. Wilke, T. Bedford, 2015, Virus evolution.

Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin

Austin G. Meyer, Claus O. Wilke, Eric T. Dawson, 2013, Philosophical Transactions of the Royal Society B: Biological Sciences.

The utility of protein structure as a predictor of site-wise dN/dS varies widely among HIV-1 proteins

C. Wilke, A. Meyer, 2015, Journal of The Royal Society Interface.

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

David B. Knoester, Jeffrey E. Barrick, Daniel E. Deatherage, 2014, BMC Genomics.

Analyzing machupo virus-receptor binding by molecular dynamics simulations

Austin G. Meyer, Sara L. Sawyer, Andrew D. Ellington, 2013, PeerJ.

Predicting virus-receptor mutant binding by molecular dynamics simulation

C. Wilke, A. Ellington, S. Sawyer, 2013 .

PeptideBuilder: A simple Python library to generate model peptides

Austin G. Meyer, Claus O. Wilke, Dariya K. Sydykova, 2013, PeerJ.

Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza H3N2 hemagglutinin

Claire D. McWhite, C. Wilke, A. Meyer, 2016, bioRxiv.

Dynamic Control of Ca2+ Binding in the C2 Domains of Synaptotagmin 1

A. Meyer, R B Sutton, E. Chapman, 2018, bioRxiv.

Geometric constraints dominate the antigenic evolution of 1 influenza H 3 N 2 hemagglutinin 2

C. Wilke, A. Meyer, 2015 .

Supporting Text : Geometric constraints dominate the antigenic 1 evolution of influenza H 3 N 2 hemagglutinin 2

C. Wilke, A. Meyer, 2015 .

Increased evolutionary rate in the 2014 West African Ebola outbreak is due to transient polymorphism and not positive selection

Stephanie J. Spielman, C. Wilke, A. Meyer, 2014 .

Lower Activation in Frontal Cortex and Posterior Cingulate Cortex Observed during Sex Determination Test in Early-Stage Dementia of the Alzheimer Type

M. O'Boyle, Dan Fang, A. Meyer, 2017, Front. Aging Neurosci..

Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin

C. Wilke, A. Meyer, 2015, bioRxiv.

White Matter Deterioration May Foreshadow Impairment of Emotional Valence Determination in Early-Stage Dementia of the Alzheimer Type

Hafiz M. R. Khan, M. O'Boyle, Dan Fang, 2017, Front. Aging Neurosci..

Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design

Eric T. Dawson, Stephanie J. Spielman, Dariya K. Sydykova, 2014, Journal of Molecular Evolution.

Computational tests of a thermal cycling strategy to isolate more complex functional nucleic acid motifs from random sequence pools by in vitro selection

Jeffrey E. Barrick, A. Meyer, A. Reba, 2012, ALIFE.