Kannan Tharakaraman

发表

Glycan Receptor Binding of the Influenza A Virus H7N9 Hemagglutinin

Nathan W. Stebbins, V. Sasisekharan, Z. Shriver, 2013, Cell.

Promoter analysis: gene regulatory motif identification with A-GLAM.

D. Landsman, J. Spouge, L. Mariño-Ramírez, 2009, Methods in molecular biology.

Identification of cis-regulatory elements in gene co-expression networks using A-GLAM.

D. Landsman, J. Spouge, O. Bodenreider, 2009, Methods in molecular biology.

The biological function of some human transcription factor binding motifs varies with position relative to the transcription start site

Olivier Bodenreider, John L. Spouge, David Landsman, 2008, Nucleic acids research.

A broadly neutralizing human monoclonal antibody is effective against H7N9

Vidya Subramanian, H. Yen, G. Wogan, 2015, Proceedings of the National Academy of Sciences.

Rational Engineering and Characterization of an mAb that Neutralizes Zika Virus by Targeting a Mutationally Constrained Quaternary Epitope.

Vidya Subramanian, Aditya Raguram, S. Vasudevan, 2018, Cell host & microbe.

Prediction of the binding interface between monoclonal antibody m102.4 and Nipah attachment glycoprotein using structure-guided alanine scanning and computational docking

R. Sasisekharan, Kannan Tharakaraman, Charlermchai Artpradit, 2020, Scientific Reports.

Prediction of the structural interface between fibroblast growth factor23 and Burosumab using alanine scanning and molecular docking

R. Sasisekharan, J. Satayavivad, Kannan Tharakaraman, 2022, Scientific Reports.

Orthogonal immunoassays for IgG antibodies to SARS-CoV-2 antigens reveal that immune response lasts beyond 4 mo post illness onset

G. Wogan, Akila Jayaraman, Kannan Tharakaraman, 2021, Proceedings of the National Academy of Sciences.

Modified recombinant human erythropoietin with potentially reduced immunogenicity

R. Sasisekharan, Kannan Tharakaraman, M. Ruchirawat, 2021, Scientific Reports.

Molecular basis for dengue virus broad cross-neutralization by humanized monoclonal antibody 513

C. Verma, J. Lescar, R. Sasisekharan, 2018, Scientific Reports.

Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements

Kannan Tharakaraman, John L. Spouge, David Landsman, 2006, BMC Bioinformatics.

Glycan receptor specificity as a useful tool for characterization and surveillance of influenza A virus.

V. Sasisekharan, Z. Shriver, R. Sasisekharan, 2014, Trends in microbiology.

Antigenically intact hemagglutinin in circulating avian and swine influenza viruses and potential for H3N2 pandemic

Rahul Raman, Karthik Viswanathan, Ram Sasisekharan, 2013, Scientific Reports.

Alignments anchored on genomic landmarks can aid in the identification of regulatory elements

David Landsman, Kannan Tharakaraman, John L. Spouge, 2005, ISMB.

Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor binding sites

Nak-Kyeong Kim, Kannan Tharakaraman, Leonardo Mariño-Ramírez, 2008, BMC Bioinformatics.

A Structural and Mathematical Modeling Analysis of the Likelihood of Antibody-Dependent Enhancement in Influenza.

Vlado Dančík, Rahul Raman, Karthik Viswanathan, 2016, Trends in microbiology.

Glycan–protein interactions in viral pathogenesis

V. Sasisekharan, R. Sasisekharan, R. Raman, 2016, Current Opinion in Structural Biology.

Influenza surveillance: 2014-2015 H1N1 "swine"-derived influenza viruses from India.

Ram Sasisekharan, R. Sasisekharan, Kannan Tharakaraman, 2015, Cell host & microbe.

Generation of bispecific antibodies by structure-guided redesign of IgG constant regions

Vidya Subramanian, R. Sasisekharan, J. Satayavivad, 2023, Frontiers in Immunology.

Structural Determinants for Naturally Evolving H5N1 Hemagglutinin to Switch Its Receptor Specificity

Rahul Raman, Karthik Viswanathan, Ram Sasisekharan, 2013, Cell.

An inter-residue network model to identify mutational-constrained regions on the Ebola coat glycoprotein

Vidya Subramanian, R. Sasisekharan, R. Raman, 2017, Scientific Reports.

Competitive inhibition of heparinase by persulfonated glycosaminoglycans: a tool to detect heparin contamination.

Udayanath Aich, Z. Shriver, R. Sasisekharan, 2011, Analytical chemistry.

Structure-Guided Design of an Anti-dengue Antibody Directed to a Non-immunodominant Epitope

Hamid Tissire, Karthik Viswanathan, Zachary Shriver, 2015, Cell.

Broadly neutralizing influenza hemagglutinin stem-specific antibody CR8020 targets residues that are prone to escape due to host selection pressure.

Vidya Subramanian, V. Sasisekharan, R. Sasisekharan, 2014, Cell host & microbe.

Redesign of a cross-reactive antibody to dengue virus with broad-spectrum activity and increased in vivo potency

Luke N Robinson, Ram Sasisekharan, S Raguram, 2013, Proceedings of the National Academy of Sciences.

Extrapolating from sequence—the 2009 H1N1 'swine' influenza virus

Rahul Raman, Zachary Shriver, Ram Sasisekharan, 2009, Nature Biotechnology.

Adding sequence context to a Markov background model improves the identification of regulatory elements

Nak-Kyeong Kim, Kannan Tharakaraman, John L. Spouge, 2006, Bioinform..

Adding sequence context to a Markov background model improves the identification of regulatory elements

J. Spouge, Kannan Tharakaraman, Nak-Kyeong Kim, 2006, Bioinform..

MIT Open Access Articles Glycan receptor specificity as a useful tool for characterization and surveillance of influenza A virus

Z. Shriver, R. Sasisekharan, R. Raman, 2022 .

MIT Open Access Articles Redesign of a cross-reactive antibody to dengue virus with broad-spectrum activity and increased in vivo potency

S. Raguram, R. Sasisekharan, Kannan Tharakaraman, 2022 .

Rapid and Scalable Production of Functional SARS-CoV-2 Virus-like Particles (VLPs) by a Stable HEK293 Cell Pool

Kannan Tharakaraman, Charlermchai Artpradit, M. Ruchirawat, 2024, Vaccines.