D. Cafiso

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Membrane Structures of the Hemifusion-Inducing Fusion Peptide Mutant G1S and theFusion-Blocking Mutant G1V of Influenza Virus HemagglutininSuggest a Mechanism for Pore Opening in MembraneFusion

Lukas K. Tamm, John H. Bushweller, David S. Cafiso, 2005, Journal of Virology.

Substrate-induced exposure of an energy-coupling motif of a membrane transporter

R. Kadner, D. Cafiso, Helen J. Merianos, 2000, Nature Structural Biology.

Transport-defective mutations alter the conformation of the energy-coupling motif of an outer membrane transporter.

R. Kadner, D. Cafiso, N. Cadieux, 2001, Biochemistry.

Membrane mimetic environments alter the conformation of the outer membrane protein BtuB.

D. Cafiso, G. Fanucci, J. Y. Lee, 2003, Journal of the American Chemical Society.

Competing ligands stabilize alternate conformations of the energy coupling motif of a TonB-dependent outer membrane transporter

R. Kadner, D. Cafiso, N. Cadieux, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Spectroscopic evidence that osmolytes used in crystallization buffers inhibit a conformation change in a membrane protein.

D. Cafiso, G. Fanucci, J. Y. Lee, 2003, Biochemistry.

Substrate-dependent unfolding of the energy coupling motif of a membrane transport protein determined by double electron-electron resonance.

D. Cafiso, Qi Xu, J. Ellena, 2006, Biochemistry.

Solutes modify a conformational transition in a membrane transport protein.

D. Cafiso, G. Fanucci, Qi Xu, 2006, Biophysical journal.

Molecular basis for substrate-dependent transmembrane signaling in an outer-membrane transporter.

D. Cafiso, S. Lukasik, K. Ho, 2007, Journal of molecular biology.

Solutes alter the conformation of the ligand binding loops in outer membrane transporters.

D. Murray, D. Cafiso, Qi Xu, 2008, Biochemistry.

Membrane thickness varies around the circumference of the transmembrane protein BtuB.

D. Cafiso, J. Ellena, Pawel Lackowicz, 2011, Biophysical journal.

Location and dynamics of basic peptides at the membrane interface: electron paramagnetic resonance spectroscopy of tetramethyl-piperidine-N-oxyl-4-amino-4-carboxylic acid-labeled peptides.

D. Cafiso, K. Victor, 2001, Biophysical journal.

The structure of the coiled-coil domain of Ndel1 and the basis of its interaction with Lis1, the causal protein of Miller-Dieker lissencephaly.

A. Musacchio, A. Tripathy, Z. Derewenda, 2007, Structure.

Procedure using voltage-sensitive spin-labels to monitor dipole potential changes in phospholipid vesicles: The estimation of phloretin-induced conductance changes in vesicles

D. Cafiso, W. Perkins, 1987, The Journal of Membrane Biology.

An electrical and structural characterization of H+/OH- currents in phospholipid vesicles.

D. Cafiso, W. Perkins, 1986, Biochemistry.

Preparation of unilamellar lipid vesicles at 37°C by vaporization methods

H. Petty, H. Mcconnell, D. Cafiso, 1981 .

Elucidation of cross-relaxation pathways in phospholipid vesicles utilizing two-dimensional proton NMR spectroscopy

William C. Hutton, David S. Cafiso, W. Hutton, 1985 .

Localization of hydrophobic ions in phospholipid bilayers using 1H nuclear Overhauser effect spectroscopy.

S. J. Archer, D. Cafiso, J. Ellena, 1987, Biochemistry.

ELUCIDATION OF CROSS-RELAXATION PATHWAYS IN PHOSPHOLIPID VESICLES UTILIZING TWO-DIMENSIONAL PROTON NMR SPECTROSCOPY

W. Hutton, D. Cafiso, J. Ellena, 1985 .

Experimental Determination of the Topography of Membrane Proteins: Lessons from the Nicotinic Acetylcholine Receptor, a Multisubunit Polytopic Protein

D. Cafiso, 1994 .

Membrane orientation of the N-terminal segment of alamethicin determined by solid-state 15N NMR.

D. Cafiso, C. North, M. Barranger-Mathys, 1995, Biophysical journal.

Membrane structure of voltage-gated channel forming peptides by site-directed spin-labeling.

D. Cafiso, M. Barranger-Mathys, 1996, Biochemistry.

Correlation between the free energy of a channel-forming voltage-gated peptide and the spontaneous curvature of bilayer lipids.

J. R. Lewis, D. Cafiso, 1999, Biochemistry.

Determination of the molecular dynamics of alamethicin using 13C NMR: implications for the mechanism of gating of a voltage-dependent channel.

D. Cafiso, J. Ellena, L. Kelsh, 1992, Biochemistry.

Efficient water oxidation kinetics and enhanced electron transport in Li-doped TiO2 nanotube photoanodes

D. Cafiso, Yin Xu, G. Zangari, 2016 .

Hybrid Refinement of Heterogeneous Conformational Ensembles using Spectroscopic Data

P. Kasson, D. Cafiso, J. Hays, 2019, bioRxiv.

Hybrid Refinement of Heterogeneous Conformational Ensembles using Spectroscopic Data

P. Kasson, D. Cafiso, J. Hays, 2019, bioRxiv.

The secretory carrier membrane protein family: structure and membrane topology.

S. Jayasinghe, D. Cafiso, D. Singleton, 2000, Molecular biology of the cell.

Conformation and membrane position of the region linking the two C2 domains in synaptotagmin 1 by site-directed spin labeling.

D. Cafiso, Hao Huang, 2008, Biochemistry.

Location of the myristoylated alanine-rich C-kinase substrate (MARCKS) effector domain in negatively charged phospholipid bicelles.

D. Cafiso, J. Ellena, M. C. Burnitz, 2003, Biophysical journal.

Phosphatidylinositol 4,5 bisphosphate controls the cis and trans interactions of synaptotagmin 1

Sarah B. Nyenhuis, D. Cafiso, Anusa Thapa, 2019, bioRxiv.

Munc18-1 and the Syntaxin-1 N Terminus Regulate Open-Closed States in a t-SNARE Complex.

D. Cafiso, Damian Dawidowski, 2016, Structure.

Synaptotagmin 1 Modulates Lipid Acyl Chain Order in Lipid Bilayers by Demixing Phosphatidylserine*

A. Lai, L. Tamm, D. Cafiso, 2011, The Journal of Biological Chemistry.

Synaptotagmin 1 and SNAREs form a complex that is structurally heterogeneous.

A. Lai, D. Cafiso, Hao Huang, 2011, Journal of molecular biology.

Perturbation of a Very Late Step of Regulated Exocytosis by a Secretory Carrier Membrane Protein (SCAMP2)-derived Peptide*

D. Cafiso, D. Castle, Zhenheng Guo, 2002, The Journal of Biological Chemistry.

Position of synaptotagmin I at the membrane interface: cooperative interactions of tandem C2 domains.

D. Cafiso, A. Hinderliter, Dawn Z. Herrick, 2006, Biochemistry.

Choice of reconstitution protocol modulates the aggregation state of full‐length membrane‐reconstituted synaptotagmin‐1

Sarah B. Nyenhuis, D. Cafiso, 2018, Protein science : a publication of the Protein Society.

Synaptotagmin-1 binds to PIP2-containing membrane but not to SNAREs at physiological ionic strength

Jong Bae Seo, R. Jahn, P. Walla, 2015, Nature Structural &Molecular Biology.

Partitioning of synaptotagmin I C2 domains between liquid-ordered and liquid-disordered inner leaflet lipid phases.

L. Tamm, D. Cafiso, V. Kiessling, 2011, Biochemistry.

Conserved arginine residues in synaptotagmin 1 regulate fusion pore expansion through membrane contact

Sarah B. Nyenhuis, L. Tamm, D. Cafiso, 2020, Nature Communications.

Identifying and Quantitating Conformational Exchange in Membrane Proteins Using Site-Directed Spin Labeling

D. Cafiso, 2014, Accounts of chemical research.

Allosteric control of syntaxin 1a by Munc18-1: characterization of the open and closed conformations of syntaxin.

D. Cafiso, Damian Dawidowski, 2013, Biophysical journal.

Synaptic vesicle fusion: today and beyond

J. Rizo, M. Lindau, M. Jackson, 2019, Nature Structural & Molecular Biology.

Membrane-bound orientation and position of the synaptotagmin C2B domain determined by site-directed spin labeling.

D. Cafiso, A. Hinderliter, A. A. Frazier, 2005, Biochemistry.

Membrane-bound orientation and position of the synaptotagmin I C2A domain by site-directed spin labeling.

D. Cafiso, A. Hinderliter, A. A. Frazier, 2003, Biochemistry.

Dynamics and aggregation of the peptide ion channel alamethicin. Measurements using spin-labeled peptides.

D. Cafiso, J. Ellena, S. Archer, 1991, Biophysical journal.

Identifying conformational changes with site-directed spin labeling

David S. Cafiso, C. Altenbach, W. Hubbell, 2000, Nature Structural Biology.

Taking the pulse of protein interactions by EPR spectroscopy.

D. Cafiso, 2012, Biophysical journal.

Membrane hydrocarbon thickness modulates the dynamics of a membrane transport protein.

D. Cafiso, G. Fanucci, Qi Xu, 2008, Biophysical journal.

Differential substrate-induced signaling through the TonB-dependent transporter BtuB

R. Kadner, D. Cafiso, N. Cadieux, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Intra and Inter-Molecular Interactions Dictate the Aggregation State of Irinotecan Co-Encapsulated with Floxuridine Inside Liposomes

L. Mayer, D. Cabral-Lilly, P. Tardi, 2008, Pharmaceutical Research.

Membrane orientation and position of the C2 domain from cPLA2 by site-directed spin labeling.

J. Falke, D. Cafiso, G. Fanucci, 2002, Biochemistry.

Spin-diffusion couples proton relaxation rates for proteins in exchange with a membrane interface.

R. Bryant, D. Cafiso, J. Ellena, 2008, Journal of magnetic resonance.

Electrokinetic and electrostatic properties of bilayers containing gangliosides GM1, GD1a, or GT1. Comparison with a nonlinear theory.

K. Sharp, S. McLaughlin, D. Brooks, 1986, Biophysical journal.

TRIM Fold of MuRF 1 Using anonical Antiparallel xtended COS-Box rzyna

O. Mayans, D. Norman, D. Cafiso, 2019 .

Defining protein-protein interactions using site-directed spin-labeling: the binding of protein kinase C substrates to calmodulin.

D. Cafiso, Z. Qin, S. Wertz, 1996, Biochemistry.

Molecular flexibility demonstrated by paramagnetic enhancements of nuclear relaxation. Application to alamethicin: a voltage-gated peptide channel.

R. Bryant, D. Cafiso, C. North, 1994, Biophysical journal.

Interactions controlling the membrane binding of basic protein domains: phenylalanine and the attachment of the myristoylated alanine-rich C-kinase substrate protein to interfaces.

D. Cafiso, K. Victor, J. Jacob, 1999, Biochemistry.

BRIEF COMMUNICATION PHOSPHOLIPID PACKING AND CONFORMATION IN SMALL VESICLES REVEALED BY TWO-DIMENSIONAL 'H NUCLEAR MAGNETIC RESONANCE CROSS-RELAXATION SPECTROSCOPY

D. Cafiso, XU ZHEN-CHEN, 2005 .

Reconstitutive refolding of diacylglycerol kinase, an integral membrane protein.

C. Sanders, D. Cafiso, K. Oxenoid, 1999, Biochemistry.

Perfluorooctyl bromide has limited membrane solubility and is located at the bilayer center. Locating small molecules in lipid bilayers through paramagnetic enhancements of NMR relaxation.

D. Cafiso, J. Ellena, V. Obraztsov, 2002, Journal of medicinal chemistry.

INTERFACIAL CHARGE SEPARATION IN PHOTORECEPTOR MEMBRANES

W. Hubbell, D. Cafiso, 1980, Photochemistry and photobiology.

Disulfide chaperone knock-outs enable in-vivo double spin-labeling of an outer-membrane transporter

D. Cafiso, R. Nakamoto, T. D. Nilaweera, 2019, bioRxiv.

A Dynamic Protein-Protein Coupling between the TonB-Dependent Transporter FhuA and TonB.

D. Cafiso, Lishan Liu, Jessica L. Sarver, 2018, Biochemistry.

Ligand-induced structural changes in the Escherichia coli ferric citrate transporter reveal modes for regulating protein-protein interactions.

D. Cafiso, Miyeon Kim, Emily A Andrews, 2012, Journal of molecular biology.

The calcium-dependent and calcium-independent membrane binding of synaptotagmin 1: two modes of C2B binding.

D. Cafiso, J. Ellena, Weiwei Kuo, 2009, Journal of molecular biology.

Secretory carrier membrane protein SCAMP2 and phosphatidylinositol 4,5-bisphosphate interactions in the regulation of dense core vesicle exocytosis.

D. Cafiso, G. Szabó, J. Ellena, 2007, Biochemistry.

Evidence for the Supramolecular Organization of a Bacterial Outer-Membrane Protein from In-Vivo Pulse EPR Spectroscopy.

Kateri H. DuBay, D. Cafiso, T. D. Nilaweera, 2020, Journal of the American Chemical Society.

[16] Measuring electrostatic potentials adjacent to membranes

S. McLaughlin, A. Winiski, D. Cafiso, 1989 .

Measuring electrostatic potentials adjacent to membranes.

S. McLaughlin, A. Winiski, D. Cafiso, 1989, Methods in enzymology.

A test of discreteness-of-charge effects in phospholipid vesicles: measurements using paramagnetic amphiphiles.

D. Cafiso, S. Hartsel, 1986, Biochemistry.

Structure and Interactions of C2 Domains at Membrane Surfaces

D. Cafiso, 2006 .

Estimation of transmembrane potentials from phase equilibria of hydrophobic paramagnetic ions.

W. Hubbell, D. Cafiso, 1978, Biochemistry.

In-situ observation of conformational dynamics and protein-ligand/substrate interactions in outer membrane proteins with DEER/PELDOR spectroscopy

D. Cafiso, T. Prisner, Eva A. Jaumann, 2019, Nature Protocols.

Ligand Induced Conformational Changes of a Membrane Transporter in E. coli Cells Observed with DEER/PELDOR.

D. Cafiso, B. Joseph, A. Sikora, 2016, Journal of the American Chemical Society.

Distance Measurement on an Endogenous Membrane Transporter in E. coli Cells and Native Membranes Using EPR Spectroscopy.

G. Jeschke, D. Cafiso, E. Bordignon, 2015, Angewandte Chemie.

Localizing the nitroxide group of fatty acid and voltage-sensitive spin-labels in phospholipid bilayers.

D. Cafiso, J. Ellena, R. Dominey, 1988, Biochimica et biophysica acta.

Distribution of general anesthetics in phospholipid bilayers determined using 2H NMR and 1H-1H NOE spectroscopy.

J. Baber, D. Cafiso, J. Ellena, 1995, Biochemistry.

Design, synthesis, and evaluation of analogues of 3,3,3-trifluoro-2-hydroxy-2-phenyl-propionamide as orally available general anesthetics.

J. Kapur, D. Cafiso, J. Ellena, 2003, Journal of medicinal chemistry.

Potential-dependent phase partitioning of fluorescent hydrophobic ions in phospholipid vesicles

D. Raines, D. Cafiso, 2005, The Journal of Membrane Biology.

Time-dependent binding of paramagnetic and fluorescent hydrophobic ions to the acetylcholine receptor from Torpedo.

D. Raines, D. Cafiso, S. Hartsel, 1987, Biochemistry.

Probes of membrane electrostatics: synthesis and voltage-dependent partitioning of negative hydrophobic ion spin labels in lipid vesicles.

W. Hubbell, D. Cafiso, R. Flewelling, 1993, Biophysical journal.

The role of proline and glycine in determining the backbone flexibility of a channel-forming peptide.

D. Cafiso, H. Duclohier, D S Cafiso, 1999, Biophysical journal.

Electron paramagnetic resonance methods for measuring pH gradients, transmembrane potentials, and membrane dynamics.

D. Cafiso, 1989, Methods in enzymology.

Molecular dynamics in sodium dodecyl sulfate micelles elucidated using carbon-13 and proton spin-lattice relaxation, carbon-13 spin-spin relaxation, and proton nuclear Overhauser effect spectroscopy

D. Cafiso, J. Ellena, R. Dominey, 1987 .

Phospholipid packing and conformation in small vesicles revealed by two-dimensional 1H nuclear magnetic resonance cross-relaxation spectroscopy.

D. Cafiso, Z. Xu, 1986, Biophysical journal.

Characterization of H+/OH− currents in phospholipid vesicles

D. Cafiso, W. Perkins, 1987, Journal of bioenergetics and biomembranes.

Electrogenic H+/OH- movement across phospholipid vesicles measured by spin-labeled hydrophobic ions.

W. Hubbell, D. Cafiso, 1983, Biophysical journal.

Internal electrostatic potentials in bilayers: measuring and controlling dipole potentials in lipid vesicles.

D. Cafiso, J C Franklin, D S Cafiso, 1993, Biophysical journal.

Kinetics of Interaction of the Myristoylated Alanine-rich C Kinase Substrate, Membranes, and Calmodulin*

D. Murray, S. McLaughlin, D. Cafiso, 1997, The Journal of Biological Chemistry.

Comparison of the lipid acyl chain dynamics between small and large unilamellar vesicles.

D. Cafiso, J. Ellena, L. S. Lepore, 1992, Biophysical journal.

A selective cholesterol-dependent induction of H+/OH- currents in phospholipid vesicles by amphotericin B.

D. Cafiso, S. Hartsel, W. Perkins, 1988, Biochemistry.

Electrostatics of phosphoinositide bilayer membranes. Theoretical and experimental results.

S. Marčelja, S. McLaughlin, M. Langner, 1990, Biophysical journal.

Membrane structure and fusion-triggering conformational change of the fusion domain from influenza hemagglutinin

Lukas K. Tamm, John H. Bushweller, David S. Cafiso, 2001, Nature Structural Biology.

Probing the conformation of the resting state of a bacterial multidrug ABC transporter, BmrA, by a site‐directed spin labeling approach

D. Cafiso, J. Jault, Miyeon Kim, 2009, Protein science : a publication of the Protein Society.

Lipid bilayers: membrane-protein electrostatic interactions

D. Cafiso, 1991 .

Anesthetics reduce the magnitude of the membrane dipole potential. Measurements in lipid vesicles using voltage-sensitive spin probes.

D. Cafiso, G. Szabó, Z. Qin, 1995, Biochemistry.

Membrane position of a basic aromatic peptide that sequesters phosphatidylinositol 4,5 bisphosphate determined by site-directed spin labeling and high-resolution NMR.

D. Cafiso, J. Ellena, Jing Wu, 2004, Biophysical journal.

[83] Spin-label probes of light-induced electrical potentials in rhodopsin and bacteriorhodopsin

A. Quintanilha, D. Cafiso, Wayne L. Hubel, 1982 .

Light-induced interfacial potentials in photoreceptor membranes.

W. Hubbell, D. Cafiso, 1980, Biophysical journal.

Additional component required for activity and reconstitution of light-activated vertebrate photoreceptor GTPase.

W. Hubbell, T. Shinozawa, D. Cafiso, 1980, Proceedings of the National Academy of Sciences of the United States of America.

Structural intermediates observed only in intact Escherichia coli indicate a mechanism for TonB-dependent transport

D. Cafiso, T. D. Nilaweera, D. Nyenhuis, 2021, bioRxiv.

Distance Measurement on an Endogenous Membrane Transporter in E. coli Cells and Native Membranes Using EPR Spectroscopy.

G. Jeschke, D. Cafiso, E. Bordignon, 2015, Angewandte Chemie.

Conformational exchange in a membrane transport protein is altered in protein crystals.

P. Horanyi, M. Wiener, D. Cafiso, 2010, Biophysical journal.

Recent advances and applications of site-directed spin labeling.

D. Cafiso, G. Fanucci, Gail E Fanucci, 2006, Current opinion in structural biology.

Electrostatic sequestration of PIP2 on phospholipid membranes by basic/aromatic regions of proteins.

D. Murray, S. McLaughlin, A. Gambhir, 2004, Biophysical journal.

Peptide-membrane interactions determined using site-directed spin labeling

David S. Cafiso, D. Cafiso, 2002 .

Collisions between helical peptides in membranes monitored using electron paramagnetic resonance: evidence that alamethicin is monomeric in the absence of a membrane potential.

D. Cafiso, M. Barranger-Mathys, 1994, Biophysical journal.

Voltage-dependent conductance for alamethicin in phospholipid vesicles. A test for the mechanism of gating.

D. Cafiso, S. Archer, 1991, Biophysical journal.

Proteolytic fragments of the nicotinic acetylcholine receptor identified by mass spectrometry: implications for receptor topography.

J. Yates, J. Shabanowitz, D. Hunt, 1989, Biochemistry.

TRIM5α SPRY/coiled-coil interactions optimize avid retroviral capsid recognition

Katarzyna A. Skorupka, E. Campbell, S. Mukherjee, 2017, PLoS pathogens.

Solution structure of the ESCRT-I complex by small-angle X-ray scattering, EPR, and FRET spectroscopy

Gerhard Hummer, Evzen Boura, William A Eaton, 2011, Proceedings of the National Academy of Sciences.

NMR solution structure of the integral membrane enzyme DsbB: functional insights into DsbB-catalyzed disulfide bond formation.

J. Beckwith, T. Cierpicki, Yunpeng Zhou, 2008, Molecular cell.

Solution and membrane-bound conformations of the tandem C2A and C2B domains of synaptotagmin 1: Evidence for bilayer bridging.

C. Schwieters, D. Cafiso, J. Ellena, 2009, Journal of molecular biology.

The SNARE Motif of Synaptobrevin Exhibits an Aqueous–Interfacial Partitioning That Is Modulated by Membrane Curvature

L. Tamm, D. Cafiso, B. Liang, 2014, Biochemistry.

Contrasting membrane localization and behavior of halogenated cyclobutanes that follow or violate the Meyer-Overton hypothesis of general anesthetic potency.

D. Cafiso, C. North, D S Cafiso, 1997, Biophysical journal.

Non-Native Metal Ion Reveals the Role of Electrostatics in Synaptotagmin 1-Membrane Interactions.

P. Hart, A. Srivastava, T. Igumenova, 2017, Biochemistry.

Osmolytes modulate conformational exchange in solvent‐exposed regions of membrane proteins

D. Cafiso, Miyeon Kim, Marie-Ange Do Cao, 2010, Protein science : a publication of the Protein Society.

Myristoylated Alanine-rich C Kinase Substrate (MARCKS) Sequesters Spin-labeled Phosphatidylinositol 4,5-Bisphosphate in Lipid Bilayers*

G. Prestwich, D. Cafiso, C. G. Ferguson, 2002, The Journal of Biological Chemistry.

Phosphatidylinositol 4,5-bisphosphate alters synaptotagmin 1 membrane docking and drives opposing bilayers closer together.

D. Cafiso, Weiwei Kuo, Dawn Z. Herrick, 2011, Biochemistry.

Membrane structure of protein kinase C and calmodulin binding domain of myristoylated alanine rich C kinase substrate determined by site-directed spin labeling.

D. Cafiso, Z. Qin, 1996, Biochemistry.

Membrane Proteins: Properties

D. Cafiso, L. Columbus, R. Nakamoto, 2008 .

Distribution of Phospholipids and Triglycerides in Multivesicular Lipid Particles

D. Cafiso, J. Ellena, M. Sankaram, 1999 .

Chapter 7 Interaction of Natural and Model Peptides with Membranes

D. Cafiso, 1999 .

Structural features that modulate the transmembrane migration of a hydrophobic peptide in lipid vesicles.

S. Jayasinghe, D. Cafiso, J. Ellena, 1998, Biophysical journal.

Alamethicin: a peptide model for voltage gating and protein-membrane interactions.

D. Cafiso, 1994, Annual review of biophysics and biomolecular structure.

Structure of micelle-associated alamethicin from 1H NMR. Evidence for conformational heterogeneity in a voltage-gated peptide.

S. Jayasinghe, D. Cafiso, J. Ellena, 1994, Biochemistry.

PtdInsP2 and PtdSer cooperate to trap synaptotagmin-1 to the plasma membrane in the presence of calcium

R. Jahn, Sarah B. Nyenhuis, D. Cafiso, 2016, eLife.

Structural and dynamic studies of the transcription factor ERG reveal DNA binding is allosterically autoinhibited

John H. Bushweller, Edward E. Pryor, David S. Cafiso, 2013, Proceedings of the National Academy of Sciences.

Continuum solvent model calculations of alamethicin-membrane interactions: thermodynamic aspects.

N. Ben-Tal, A. Kessel, D. Cafiso, 2000, Biophysical journal.

Continuum Solvent Model Calculations of Alamethicin-Membrane Interactions: Thermodynamic Aspects

N. Ben-Tal, A. Kessel, D. Cafiso, 2000 .

EPR determination of membrane potentials.

W. Hubbell, D. Cafiso, 1981, Annual review of biophysics and bioengineering.

Dynamic structure of lipid-bound synaptobrevin suggests a nucleation-propagation mechanism for trans-SNARE complex formation

R. Jahn, L. Tamm, D. Cafiso, 2009, Proceedings of the National Academy of Sciences.

Influence of lipid on the structure and phosphorylation of protein kinase C alpha substrate peptides.

D. Cafiso, C. Grisham, J. J. Sando, 1998, The Biochemical journal.

Atomic view of the energy landscape in the allosteric regulation of Abl kinase

C. Kalodimos, Sarah B. Nyenhuis, L. Tamm, 2017, Nature Structural & Molecular Biology.

Ebola virus glycoprotein interacts with cholesterol to enhance membrane fusion and cell entry

E. Nelson, L. Tamm, D. Cafiso, 2021, Nature Structural & Molecular Biology.

Partial Metal Ion Saturation of C2 Domains Primes Synaptotagmin 1-Membrane Interactions.

T. Igumenova, Sarah B. Nyenhuis, D. Cafiso, 2020, Biophysical journal.

Partial metal ion saturation of C2 domains primes Syt1-membrane interactions

T. Igumenova, Sarah B. Nyenhuis, D. Cafiso, 2019 .

In-situ observation of conformational dynamics and protein-ligand/substrate interactions in outer membrane proteins with DEER/PELDOR spectroscopy

D. Cafiso, T. Prisner, Eva A. Jaumann, 2019, Nature Protocols.

Closure of the Cytoplasmic Gate Formed by TM5 and TM11 during Transport in the Oxalate/Formate Exchanger from Oxalobacter formigenes

P. Maloney, D. Cafiso, Osigbemhe O. B. Iyalomhe, 2014, Biochemistry.

Exploration of the TRIM Fold of MuRF1 Using EPR Reveals a Canonical Antiparallel Structure and Extended COS-Box

O. Mayans, D. Norman, Katarzyna A. Skorupka, 2019, Journal of molecular biology.

Influence of Charges and Dipoles on Macromolecular Adsorption and Permeability

D. Cafiso, 2017 .

Dipole potentials and spontaneous curvature: membrane properties that could mediate anesthesia.

D. Cafiso, 1998, Toxicology letters.

Estimating the electrostatic potential at the acetylcholine receptor agonist site using power saturation EPR.

D. Cafiso, G. Addona, S. Andrews, 1997, Biochimica et biophysica acta.

Reconstitution of an electrically active conformational transition in rhodopsin-containing membranes

D. Cafiso, Dana S. Cline, 1986 .

Transmembrane electrical currents of spin-labeled hydrophobic ions.

W. Hubbell, D. Cafiso, 1982, Biophysical journal.

Solution and membrane bound structure of a peptide derived from the protein kinase C substrate domain of neuromodulin.

D. Cafiso, S. Wertz, Y. Savino, 1996, Biochemistry.

Structure of the Ebola virus envelope protein MPER/TM domain and its interaction with the fusion loop explains their fusion activity

E. Nelson, L. Tamm, D. Cafiso, 2017, Proceedings of the National Academy of Sciences.

Allosteric Signaling Is Bidirectional in an Outer-Membrane Transport Protein.

D. Cafiso, B. Joseph, A. Sikora, 2016, Biophysical journal.

Monomeric TonB and the Ton box are required for the formation of a high-affinity transporter-TonB complex.

D. Cafiso, S. Lukasik, Daniel M. Freed, 2013, Biochemistry.

Solution structure of the ESCRT-I and -II supercomplex: implications for membrane budding and scission.

Gerhard Hummer, Bartosz Różycki, Evzen Boura, 2012, Structure.

Lipid and membrane mimetic environments modulate spin label side chain configuration in the outer membrane protein A.

D. Cafiso, R. H. F. Jiménez, Daniel M. Freed, 2011, The journal of physical chemistry. B.

Paramagnetic hydrophobic ions as probes for electrically active conformational transitions in ion channels.

D. Cafiso, 1984, Biophysical journal.

Substrate-induced conformational changes of the periplasmic N-terminus of an outer-membrane transporter by site-directed spin labeling.

R. Kadner, D. Cafiso, N. Cadieux, 2003, Biochemistry.

A disulfide chaperone knockout facilitates spin labeling and pulse EPR spectroscopy of outer membrane transporters

D. Cafiso, R. Nakamoto, T. D. Nilaweera, 2023, Protein science : a publication of the Protein Society.

The N-terminal domain of a TonB-dependent transporter undergoes a reversible stepwise denaturation.

D. Cafiso, Ricardo H. Flores Jiménez, 2012, Biochemistry.

Substrate-dependent transmembrane signaling in TonB-dependent transporters is not conserved

D. Cafiso, G. Fanucci, Miyeon Kim, 2007, Proceedings of the National Academy of Sciences.

Complexin Binding to Membranes and Acceptor t-SNAREs Explains Its Clamping Effect on Fusion.

L. Tamm, D. Cafiso, V. Kiessling, 2017, Biophysical journal.

Distance estimates from paramagnetic enhancements of nuclear relaxation in linear and flexible model peptides.

R. Bryant, D. Cafiso, B. Baker, 1999, Biophysical journal.

The enhancement of proton/hydroxyl flow across lipid vesicles by inhalation anesthetics.

D. Raines, D. Cafiso, 1989, Anesthesiology.

Antigen-based heteropolymers facilitate, via primate erythrocyte complement receptor type 1, rapid erythrocyte binding of an autoantibody and its clearance from the circulation in rhesus monkeys.

D. Cafiso, R. Taylor, G. Addona, 1995, Journal of immunology.

Native Cell Environment Constrains Loop Structure in the Escherichia coli Cobalamin Transporter BtuB.

D. Cafiso, T. D. Nilaweera, D. Nyenhuis, 2020, Biophysical journal.

Molecular origin of electron paramagnetic resonance line shapes on β-barrel membrane proteins: the local solvation environment modulates spin-label configuration.

P. Horanyi, D. Cafiso, Ali K. Khan, 2011, Biochemistry.

Structure and dynamics of the beta-barrel of the membrane transporter BtuB by site-directed spin labeling.

R. Kadner, D. Cafiso, N. Cadieux, 2002, Biochemistry.

Water translational motion at the bilayer interface: an NMR relaxation dispersion measurement.

R. Bryant, C. Polnaszek, C. Lester, 1997, Biophysical journal.

Solution and membrane-bound conformations of the tandem C2A and C2B domains of synaptotagmin 1: Evidence for bilayer bridging.

C. Schwieters, D. Cafiso, J. Ellena, 2009, Journal of molecular biology.

The Juxtamembrane Linker of Full-length Synaptotagmin 1 Controls Oligomerization and Calcium-dependent Membrane Binding*

Bin Lu, L. Tamm, D. Cafiso, 2014, The Journal of Biological Chemistry.

A molecular mechanism for calcium/synaptotagmin-triggered exocytosis

Sarah B. Nyenhuis, L. Tamm, D. Cafiso, 2018, Nature Structural & Molecular Biology.

Solution structure of the ESCRT-I and -II supercomplex: implications for membrane budding and scission.

G. Hummer, W. Eaton, B. Różycki, 2012, Structure.

Estimation of transmembrane pH gradients from phase equilibria of spin-labeled amines.

W. Hubbell, D. Cafiso, 1978, Biochemistry.

Exploration of the TRIM fold of MuRF1 using EPR reveals a canonical antiparallel structure and extended COS-box

O. Mayans, D. Norman, D. Cafiso, 2019 .