P. Agris

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tRNA's wobble decoding of the genome: 40 years of modification.

Paul F Agris, William D. Graham, Franck A. P. Vendeix, 2007, Journal of molecular biology.

5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.

P. Agris, Y. Chen, H. Sierzputowska-Gracz, 1993, Biochemistry.

Structure and conformation of the hypermodified purine nucleoside wyosine and its isomers: A comparison of coupling constants and distance geometry solutions

P. Agris, H. Sierzputowska-Gracz, R. Guenther, 1991 .

Accurate Translation of the Genetic Code Depends on tRNA Modified Nucleosides*

P. Agris, R. Guenther, C. Yarian, 2002, The Journal of Biological Chemistry.

Decoding the genome: a modified view.

P. Agris, 2004, Nucleic acids research.

Post-Transcriptional Modifications of RNA: Impact on RNA Function and Human Health

P. Agris, Gabrielle C. Todd, K. Sarachan, 2016 .

Attomole quantification and global profile of RNA modifications: Epitranscriptome of human neural stem cells

S. Temple, P. Agris, Maria Basanta-Sanchez, 2015, Nucleic acids research.

The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function.

P. Agris, P F Agris, 1996, Progress in nucleic acid research and molecular biology.

RNA Modified Uridines VII: Chemical Synthesis and Initial Analysis of tRNA D-Loop Oligomers with Tandem Modified Uridines

B. Nawrot, P. Agris, H. Sierzputowska-Gracz, 1995 .

The role of modifications in codon discrimination by tRNALysUUU

Paul F Agris, F. Murphy, V. Ramakrishnan, 2004, Nature Structural &Molecular Biology.

tRNA's modifications bring order to gene expression.

Paul F Agris, Franck A. P. Vendeix, P. Agris, 2008, Current opinion in microbiology.

Experimental Models of Protein–RNA Interaction: Isolation and Analyses of tRNAPhe and U1 snRNA-Binding Peptides from Bacteriophage Display Libraries

P. Agris, S. Deutscher, R. Guenther, 1999, Journal of protein chemistry.

Amino Acid Signature Enables Proteins to Recognize Modified tRNA

C. Hall, P. Agris, Xingqing Xiao, 2014, Biochemistry.

A counterintuitive Mg2+-dependent and modification-assisted functional folding of mitochondrial tRNAs.

Christopher I. Jones, S. Martinis, L. Spremulli, 2006, Journal of molecular biology.

Unconventional structure of tRNA(Lys)SUU anticodon explains tRNA's role in bacterial and mammalian ribosomal frameshifting and primer selection by HIV-1.

P. Agris, R. Guenther, E. Sochacka, 1997, RNA.

Assessing incomplete deprotection of microarray oligonucleotides in situ

H. Dressman, M. Garcia-Blanco, P. Agris, 2006, Nucleic acids research.

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: a modified-wobble hypothesis.

P. Agris, 1991, Biochimie.

In vitro synthesis of 16S ribosomal RNA containing single base changes and assembly into a functional 30S ribosome.

R Denman, J Ofengand, K Nurse, 1987, Biochemistry.

Quantitative enzymatic hydrolysis of tRNAs: reversed-phase high-performance liquid chromatography of tRNA nucleosides.

K. Kuo, R. McCune, C. Gehrke, 1982, Journal of chromatography.

Designing peptide sequences in flexible chain conformations to bind RNA: a search algorithm combining Monte Carlo, self-consistent mean field and concerted rotation techniques.

C. Hall, P. Agris, Xingqing Xiao, 2015, Journal of chemical theory and computation.

An antisuppressor mutation of Schizosaccharomyces pombe affects the post-transcriptional modification of the "wobble" base in the anticodon of tRNAs.

P. Thuriaux, K. Kuo, C. Gehrke, 1984, The Journal of biological chemistry.

In situ activation of a doxorubicin prodrug using imaging-capable nanoparticles.

M. Royzen, M. Yigit, P. Agris, 2016, Chemical communications.

Chapter 8 High Performance Liquid Chromatography of Cap Structures and Nucleoside Composition of MRNAs

K. Kuo, C. Gehrke, P. Agris, 1990 .

Quantitative measurement of mRNA cap 0 and cap 1 structures by high-performance liquid chromatography.

K. Kuo, C. Gehrke, P. Agris, 1986, Journal of chromatography.

The design of a peptide sequence to inhibit HIV replication: a search algorithm combining Monte Carlo and self-consistent mean field techniques

C. Hall, P. Agris, Xingqing Xiao, 2014, Journal of biomolecular structure & dynamics.

Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNA Met

William D. Graham, Franck A. P. Vendeix, R. Kaiser, 2008 .

Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNAMet

William D. Graham, Franck A. P. Vendeix, R. Kaiser, 2008, Nucleic acids research.

Gene usage by an anti-U1 snRNP 70K monoclonal autoantibody derived from a lupus-prone mouse.

P. Agris, S. Pelsue, 1994, Journal of autoimmunity.

In vivo decoding rules in Schizosaccharomyces pombe are at variance with in vitro data

P. Agris, P. Munz, J. Kohli, 1981, Nature.

Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.

P. Agris, R. Guenther, C. Yarian, 2000, Biochemistry.

Molecular relationships between two nuclear antigens, ribonucleoprotein and Sm: purification of active antigens and their biochemical characterization.

S. Golden, P. Agris, G. Sharp, 1981, Biochemistry.

Spatial localization of distinct rheumatic disease-associated epitopes and the RNA "cap" of the U1 snRNP particle.

P. Agris, A. Boak, S. A. Kovacs, 1992, Immunological investigations.

Small nuclear ribonucleoprotein antigens are absent from 10S translation inhibitory ribonucleoprotein but present in cytoplasmic messenger ribonucleoprotein and polysomes.

P. Agris, A. Boak, S. Sarkar, 1986, Archives of biochemistry and biophysics.

Characterization of the autoimmune antigenic determinant for ribonucleoprotein (RNP) antibody.

H. Gross, P. Agris, G. Sharp, 1984, Immunological communications.

Mechanism of expanding the decoding capacity of tRNAs by modification of uridines

Franck A. P. Vendeix, F. Murphy, A. Weixlbaumer, 2007, Nature Structural &Molecular Biology.

Structural characterization of an intermolecular RNA-RNA interaction involved in the transcription regulation element of a bipartite plant virus.

S. Lommel, P. Agris, R. Guenther, 2004, Nucleic acids research.

The uridine in "U-turn": contributions to tRNA-ribosomal binding.

P. Agris, R. Guenther, E. Sochacka, 1999, RNA.

TET1‐Mediated Oxidation of 5‐Formylcytosine (5fC) to 5‐Carboxycytosine (5caC) in RNA

Minyong Li, P. Agris, Yubin Zhou, 2017, Chembiochem : a European journal of chemical biology.

Chapter 6 Three Dimensional Dynamic Structure of Transfer Rna by Nuclear Magnetic Resonance Spectroscopy

P. Agris, H. Sierzputowska-Gracz, 1990 .

Transfer RNA contains sites of localized positive charge: carbon NMR studies of [13C]methyl-enriched Escherichia coli and yeast tRNAPhe.

P. Agris, H. Sierzputowska-Gracz, C. Smith, 1986, Biochemistry.

Nuclear magnetic resonance signal assignments of purified [13C]methyl-enriched yeast phenylalanine transfer ribonucleic acid.

P. Agris, P. Schmidt, J. Petsch, 1985, Biochemistry.

Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains.

P. Agris, R. Guenther, S. Ashraf, 1999, RNA.

Free energy calculation of modified base-pair formation in explicit solvent: A predictive model.

Franck A. P. Vendeix, P. Agris, Antonio M. Muñoz, 2009, RNA.

Escherichia coli formylmethionine tRNA: methylation of specific guanine and adenine residues catalyzed by HeLa cells tRNA methylases and the effect of these methylations on its biological properties.

G. Brown, L. Spremulli, P. Agris, 1974, Archives of biochemistry and biophysics.

Comparison of various preparations of nuclear antigens by hemagglutination inhibition (HAI).

P. Agris, G. Sharp, A. Boak, 1984, Immunological Communications.

Quality assessment of commercial small interfering RNA and DNA: monoclonal antibodies and a high-throughput chemiluminescence assay.

P. Agris, L. Barley-Maloney, 2007, Analytical biochemistry.

Involvement of the anticodon region of Escherichia coli tRNAGln and tRNAGlu in the specific interaction with cognate aminoacyl-tRNA synthetase. Alteration of the 2-thiouridine derivatives located in the anticodon of the tRNAs by BrCN or sulfur deprivation.

D. Söll, T. Seno, P. Agris, 1974, Biochimica et biophysica acta.

The effect of growth temperatures on the in vivo ribose methylation of Bacillus stearothermophilus transfer RNA.

D. Söll, P. Agris, H. Koh, 1973, Archives of biochemistry and biophysics.

Conformation of the hypermodified purine queuine: Substrate for the enzyme transfer RNA—guanine transglycosylase

P. Agris, H. Sierzputowska-Gracz, J. Katze, 1988 .

A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.

P. Agris, R. Guenther, E. Sochacka, 1999, Biochemistry.

Maturation of a hypermodified nucleoside in transfer RNA.

D. Söll, P. Agris, K. Schäfer, 1975, Nucleic acids research.

Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.

P. Agris, R. Guenther, E. Sochacka, 2000, Biochemistry.

RNA Modified Uridines VI: Conformations of 3-[3-(S)-Amino-3-Carboxypropyl]Uridine (acp3U) from tRNA and 1-Methyl-3-[3-(S)-Amino-3-Carboxypropyl]Pseudouridine (m1acp3Ψ) from rRNA

B. Nawrot, P. Agris, A. Małkiewicz, 1992 .

Chapter 5 Structural Elucidation of Nucleosides in Nucleic Acids

K. Kuo, C. Gehrke, P. Agris, 1990 .

Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).

P. Agris, R. Guenther, J. Stuart, 2003, Journal of molecular biology.

Biomolecular structure and function

B. Sykes, P. Agris, R. Loeppky, 1978 .

Internal motions in yeast phenylalanine transfer RNA from 13C NMR relaxation rates of modified base methyl groups: a model-free approach.

P. Agris, H. Sierzputowska-Gracz, P. Schmidt, 1987, Biochemistry.

The Importance of Being Modified: The Role of RNA Modifications in Translational Fidelity.

P. Agris, K. Sarachan, Ville Y. P. Väre, 2017, The Enzymes.

Long-term in vitro cell culture of sinclair swine melanoma

P. Agris, S. Kovacs, 1979, In Vitro.

A New Promising Anti-Infective Agent Inhibits Biofilm Growth by Targeting Simultaneously a Conserved RNA Function That Controls Multiple Genes

Haein Kim, P. Agris, Sheetal Ramachandran, 2021, Antibiotics.

Small-Molecule Antibiotics Inhibiting tRNA-Regulated Gene Expression Is a Viable Strategy for Targeting Gram-Positive Bacteria

Haein Kim, P. Agris, K. McDonough, 2020, Antimicrobial Agents and Chemotherapy.

Major and modified nucleosides in tRNA hydrolysates by high-performance liquid chromatography.

K. Kuo, C. Gehrke, P. Agris, 1979, Journal of chromatography.

Site-selected introduction of modified purine and pyrimidine ribonucleosides into RNA by automated phosphoramidite chemistry.

A. Kraszewski, B. Nawrot, P. Agris, 1995, Biochimie.

Systems for the NMR study of modified nucleoside-dependent, metal-ion induced conformational changes in nucleic acids.

S. Brown, P. Agris, 1995, Methods in enzymology.

Alterations of transfer RNA during erythroid differentiation of murine virus-induced leukemia cells.

P. Agris, 1975, Archives of biochemistry and biophysics.

Processing of tRNA is accomplished by a high-molecular-weight enzyme complex.

P. Agris, D. Setzer, C. Rodi, 1983, Recent results in cancer research. Fortschritte der Krebsforschung. Progres dans les recherches sur le cancer.

The Modified Nucleosides in Transfer RNA

P. Agris, 1977 .

Chromatography and electrophoresis techniques for demonstrating the presence of cellular N6-(delta2-isopentenyl)-adenosine-3'-monophosphate.

P. Agris, E. Sargent, 1976, Journal of chromatography.

Proton nuclear magnetic resonance of intact Friend leukemia cells: phosphorylcholine increase during differentiation.

I. Campbell, P. Agris, 1982, Science.

Structure of transfer RNA by carbon NMR: resolution of single carbon resonances from 13C-enriched, purified species.

P. Agris, P. Schmidt, 1980, Nucleic acids research.

Modifications Modulate Anticodon Loop Dynamics and Codon Recognition in E. coli tRNAArg1,2

F. Murphy, S. Ranganathan, P. Agris, 2012, Journal of molecular biology.

Functional recognition of the modified human tRNALys3(UUU) anticodon domain by HIV's nucleocapsid protein and a peptide mimic.

William D. Graham, B. Sproat, P. Agris, 2011, Journal of molecular biology.

Peptide Mimics that Target the Anticodon Stem Loop Region of Human Transfer RNA Lysine 3 in a Modification Dependent Manner . ( Under the direction of Dr

William D. Graham, P. Agris, 2010 .

The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs

Franck A. P. Vendeix, P. Agris, R. Guenther, 2009, Nucleic acids research.

Specificity of Phage Display Selected Peptides for Modified Anticodon Stem and Loop Domains of tRNA

B. Sproat, P. Agris, S. Deutscher, 2007, The protein journal.

Role of modified nucleosides of yeast tRNAPhe in ribosomal binding

P. Agris, R. Guenther, E. Sochacka, 2007, Cell Biochemistry and Biophysics.

Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding.

P. Agris, R. Guenther, C. Yarian, 2002, Nucleic acids research.

Modified constructs of the tRNA TΨC domain to probe substrate conformational requirements of m1A58 and m5U54 tRNA methyltransferases

P. Agris, R. Guenther, C. Yarian, 2000 .

Synthesis and Properties of Uniquely Modified Oligoribonucleotides: Yeast TrnaPhe Fragments with 6-Methyluridine and 5,6-Dimethyluridine at Site-Specific Positions

P. Agris, R. Guenther, E. Sochacka, 2000, Nucleosides, nucleotides & nucleic acids.

Single atom modification (O-->S) of tRNA confers ribosome binding.

P. Agris, R. Guenther, E. Sochacka, 1999, RNA.

Thermodynamic contribution of nucleoside modifications to yeast tRNA(Phe) anticodon stem loop analogs.

W. Ye, P. Agris, R. Guenther, 1999, Acta biochimica Polonica.

Modified RNAs as potential drug targets.

P. Agris, R. Guenther, A. Małkiewicz, 1998, Acta biochimica Polonica.

NMR and Paramagnetic Ion Substitution Locates a Modified‐Nucleoside Dependent Metal Binding Site in DNA: Molecular Dynamics, Surface Charge and H2O Ordering

P. Agris, R. Guenther, M. Basti, 1996 .

Design, biological activity and NMR-solution structure of a DNA analogue of yeast tRNAPhe anticodon domain

P. Agris, R. Guenther, M. Basti, 1996, Nature Structural Biology.

Chemistry and Structure of Modified Uridine Dinucleosides Are Determined by Thiolation

P. Agris, H. Sierzputowska-Gracz, E. Sochacka, 1992 .

Deteriorating collagen synthesis and cell ultrastructure accompanying senescence of human normal and Werner's syndrome fibroblast cell strains.

P. Agris, J. Basler, J. David, 1979, Experimental cell research.

Comparative structural analysis of 1-methyladenosine, 7-methylguanosine, ethenoadenosine and their protonated salts IV: 1H, 13C, and 15N NMR studies at natural isotope abundance.

P. Agris, H. Sierzputowska-Gracz, H. Gopal, 1986, Nucleic acids research.

Complete nuclear magnetic resonance signal assignments and initial structural studies of [13C]methyl-enriched yeast transfer ribonucleic acid.

P. Agris, P. Schmidt, R. Kopper, 1979, Biochemistry.

Chemical and Conformational Diversity of Modified Nucleosides Affects tRNA Structure and Function

P. Agris, K. Sarachan, Ville Y. P. Väre, 2017, Biomolecules.

Structural and mechanistic basis for enhanced translational efficiency by 2-thiouridine at the tRNA anticodon wobble position.

J. Perona, R. Kaiser, P. Limbach, 2013, Journal of molecular biology.

Human tRNA(Lys3)(UUU) is pre-structured by natural modifications for cognate and wobble codon binding through keto-enol tautomerism.

Franck A. P. Vendeix, F. Murphy, B. Sproat, 2012, Journal of molecular biology.

Bringing order to translation: the contributions of transfer RNA anticodon‐domain modifications

Paul F Agris, P. Agris, 2008, EMBO reports.

Thiolation of uridine carbon-2 restricts the motional dynamics of the transfer RNA wobble position nucleoside

B. Nawrot, P. Agris, H. Sierzputowska-Gracz, 1992 .

Chemistry and structure of modified uridines in the anticodon, wobble position of transfer RNA are determined by thiolation

K. Kuo, C. Gehrke, P. Agris, 1987 .

The RNA modification database, RNAMDB: 2011 update

Jef Rozenski, William A. Cantara, James A. McCloskey, 2010, Nucleic Acids Res..

Human tRNA Lys3UUU is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto-EnolTautomerism

Franck A. P. Vendeix, F. Murphy, B. Sproat, 2013 .

NMR-based Structural Analysis of Threonylcarbamoyl-AMP Synthase and Its Substrate Interactions*

B. Bobay, P. Agris, K. Sarachan, 2015, The Journal of Biological Chemistry.

YrdC exhibits properties expected of a subunit for a tRNA threonylcarbamoyl transferase.

P. Agris, M. Swairjo, Victoria C Jones, 2011, RNA.

UTILIZATION OF MICROBIAL CELL MUTANTS FOR THE IN VIVO PRODUCTIONS OF TRANSFER RNA FOR NMR STUDIES

P. Agris, F. Fujiwara, R. Loeppky, 1978 .

Biological function of 2-thiouridine in Escherichia coli glutamic acid transfer ribonucleic acid.

D. Söll, T. Seno, P. Agris, 1973, Biochemistry.

High Performance Liquid Chromatography of Nucleosides in RNA and DNA

M. Ehrlich, K. Kuo, C. Gehrke, 1982 .

Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA

William D. Graham, Franck A. P. Vendeix, Anne Scheunemann, 2009, Nucleic acids research.

Discovery of Small‐Molecule Antibiotics against a Unique tRNA‐Mediated Regulation of Transcription in Gram‐Positive Bacteria

D. Kitchen, P. Agris, Gabrielle C. Todd, 2019, ChemMedChem.

Modified Nucleotides in tRNALys and tRNAVal are Important for Translocation

Paul F. Agris, S. Joseph, P. Agris, 2004 .

A structural basis for restricted codon recognition mediated by 2-thiocytidine in tRNA containing a wobble position inosine.

F. Murphy, S. Ranganathan, P. Agris, 2020, Journal of molecular biology.

High-performance liquid chromatography and mass spectrometry of transfer RNA bases for isotopic abundance

K. Kuo, C. Gehrke, P. Agris, 1980 .

Natural occurrence of an inhibitor of mammalian cell growth in human and mouse cells of normal and tumor origin.

P. Agris, D. M. Burns, C. Rodi, 1976, Cancer biochemistry biophysics.

QC in antisense oligo synthesis

S. Simkins, P. Agris, Susanna Smith, 2002, Nature Biotechnology.

Simulation study of the ability of a computationally‐designed peptide to recognize target tRNALys3 and other decoy tRNAs

C. Hall, P. Agris, Xingqing Xiao, 2016, Protein science : a publication of the Protein Society.

Introducing folding stability into the score function for computational design of RNA‐binding peptides boosts the probability of success

Xingqing Xiao, Paul F Agris, Carol K Hall, 2016, Proteins.

Molecular recognition mechanism of peptide chain bound to the tRNALys3 anticodon loop in silico

C. Hall, P. Agris, Xingqing Xiao, 2015, Journal of biomolecular structure & dynamics.

Anticodon domain modifications contribute order to tRNA for ribosome-mediated codon binding.

Paul F Agris, William D. Graham, Franck A. P. Vendeix, 2008, Biochemistry.

Structural and functional roles of the N1- and N3-protons of psi at tRNA's position 39.

P. Agris, R. Guenther, C. Yarian, 1999, Nucleic acids research.

Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".

A. Kraszewski, B. Nawrot, P. Agris, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Utilization of an Escherichia coli mutant for carbon-13 enrichment of tRNA for NMR studies.

P. Agris, C. F. Schmidt, F. Fujiwara, 1975, Nucleic acids research.

STRUCTURE OF THE TRINUCLEOTIDE D-ACP3U-A WITH COORDINATED MG2+ DEMONSTRATES THAT MODIFIED NUCLEOSIDES CONTRIBUTE TO REGIONAL CONFORMATIONS OF RNA

B. Nawrot, P. Agris, H. Sierzputowska-Gracz, 1996 .

tRNA methylases from HeLa cells: purification and properties of an adenine-1-methylase and a guanine-N2-methylase.

G. Brown, L. Spremulli, P. Agris, 1974, Archives of biochemistry and biophysics.

Alterations in tRNA isoaccepting species during erythroid differentiation of the Friend leukemia cell.

P. Agris, V. K. Lin, 1980, Nucleic acids research.

Modification of messenger RNA by 2′-O-methylation regulates gene expression in vivo

O. Ilkayeva, S. Ranganathan, P. Agris, 2019, Nature Communications.

Celebrating wobble decoding: Half a century and still much is new

S. Ranganathan, P. Agris, Ville Y. P. Väre, 2017, RNA biology.

U1 SnRNP association with HnRNP involves an initial non-specific splice-site independent interaction of U1 SnRNP protein with HnRNA

P. Agris, A. Boak, S. A. Kovacs, 1991, Molecular and Cellular Biochemistry.

Plant DNA topoisomerase I is recognized and inhibited by human Scl-70 sera autoantibodies.

P. Agris, R. Guenther, S. Pelsue, 1990, Experimental cell research.

Analysis of cellular senescence through detection and assessment of RNAs and proteins important to gene expression: transfer RNAs and autoimmune antigens.

P. Agris, M. Reichlin, J. Basler, 1985, Advances in experimental medicine and biology.

The autoimmune antigen Me is distinct and related to undifferentiated connective tissue disease.

P. Agris, G. Sharp, R. Wang, 1987, Arthritis and rheumatism.

Immunochemical analysis of an arginine-rich systemic lupus erythematosus autoepitope.

P. Agris, S. Pelsue, K. Jung, 1993, Autoimmunity.

Immunoreactivity between a monoclonal lupus autoantibody and the arginine/aspartic acid repeats within the U1-snRNP 70K autoantigen is conformationally restricted

P. Agris, S. Pelsue, Stephen Pelsue, 1994, Journal of protein chemistry.

Small Nuclear Ribonucleoprotein Particles Contain Glycoproteins Recognized by Rheumatic Disease-Associated Autoantibodies

P. Agris, Jintao Chen, Jintao Chen, 1992, Lupus.

Anti-Sm autoantibodies of systemic lupus erythematosus cross react with dietary plant proteins.

P. Agris, V. Dao, S. Pelsue, 1992, Immunological investigations.

Purification and biochemical characterization of nuclear ribonucleoprotein antigen using purified antibody from serum of a patient with mixed connective tissue disease.

P. Agris, G. Sharp, M. Takano, 1980, The Journal of clinical investigation.

The human mitochondrial tRNAMet: structure/function relationship of a unique modification in the decoding of unconventional codons.

R. Kaiser, H. Lusic, A. Deiters, 2011, Journal of molecular biology.

Comparative Effects of a Lampricide and of Anoxia on the Sea Lamprey

P. Agris, 1967 .

Subcellular localization of S-adenosyl-L-methionine:tRNA methyltransferases with aminoacyl-tRNA synthetases in human and mouse: normal and leukemic leukocytes.

P. Agris, D. Setzer, D. Woolverton, 1976, Proceedings of the National Academy of Sciences of the United States of America.

Characterization of a unique enzyme complex composed of S-adenosyl-L-methionine-tRNA-methyltransferase and aminoacyl-tRNA synthetase activities.

C. Gehrke, P. Agris, D. Setzer, 1977, Nucleic acids research.

Accumulation of 2'-O-methylguanosine deficient tRNATrp in tryptophan limited Saccharomyces cerevisiae.

C. Gehrke, P. Niederberger, R. Hütter, 1982, Journal of general microbiology.

A Disease-causing Point Mutation in Human Mitochondrial tRNAMet Results in tRNA Misfolding Leading to Defects in Translational Initiation and Elongation*

William D. Graham, L. Spremulli, P. Agris, 2008, Journal of Biological Chemistry.

The nucleotide sequence of a UGA suppressor serine tRNA from Schizosaccharomyces pombe.

D. Söll, P. Agris, J. Kohli, 1979, Nucleic acids research.

Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human

William D. Graham, Franck A. P. Vendeix, R. Kaiser, 2008 .

Purification of transfer RNA species by single-step ion-exchange high-performance liquid chromatography.

P. Agris, R. Guenther, D. Gopal, 1988, Journal of chromatography.

Assembly of the archaeal box C/D sRNP can occur via alternative pathways and requires temperature-facilitated sRNA remodeling.

P. Agris, E. Maxwell, Keith T. Gagnon, 2006, Journal of molecular biology.

Nucleic Acids Research

P. Agris, D. Armstrong, Klaus P. Schafer, 2010, Nucleic Acids Research.

A Novel Role of Cytosolic Protein Synthesis Inhibition in Aminoglycoside Ototoxicity

P. Agris, B. Nicholas, James M. Pagana, 2013, The Journal of Neuroscience.

Specificity in the biosynthesis of the universal tRNA nucleoside N6-threonylcarbamoyl adenosine (t6A)—TsaD is the gatekeeper

V. de Crécy-Lagard, A. Luthra, P. Agris, 2020, RNA.

Modified constructs of the tRNA TPsiC domain to probe substrate conformational requirements of m(1)A(58) and m(5)U(54) tRNA methyltransferases.

P. Agris, R. Guenther, C. Yarian, 2000, Nucleic acids research.

Interaction of RNA with phage display selected peptides analyzed by capillary electrophoresis mobility shift assay.

P. Agris, R. Guenther, A. Szyk, 2002, RNA.

tRNA regulation of gene expression: interactions of an mRNA 5'-UTR with a regulatory tRNA.

T. Henkin, P. Agris, A. R. Nelson, 2006, RNA.

Structural dynamics of transfer ribonucleic acid: carbon-13 nuclear magnetic resonance of [13C]methyl-enriched pure species.

P. Agris, P. Schmidt, R. Kopper, 1983, Biochemistry.

Expanded use of sense codons is regulated by modified cytidines in tRNA

F. Murphy, P. Agris, H. Demirci, 2013, Proceedings of the National Academy of Sciences.

A magnesium-induced conformational transition in the loop of a DNA analog of the yeast tRNA(Phe) anticodon is dependent on RNA-like modifications of the bases of the stem.

C. C. Hardin, P. Agris, H. Sierzputowska-Gracz, 1992, Biochemistry.

Solution structure of a synthetic peptide corresponding to a receptor binding region of FSH (hFSH-β 33–53)

C. C. Hardin, P. Agris, H. Sierzputowska-Gracz, 1992, Journal of protein chemistry.

Evidence That Antibiotics Bind to Human Mitochondrial Ribosomal RNA Has Implications for Aminoglycoside Toxicity*

P. Agris, K. Sarachan, Kyla M. Frohlich, 2015, The Journal of Biological Chemistry.

Ribosome‐independent anticodon to codon binding assessed by circular dichroism: Roles of base modifications, Mg2+ and 2′OH

P. Agris, R. Guenther, M. Basti, 1996 .

The importance of being modified: an unrealized code to RNA structure and function

P. Agris, 2015, RNA.

The role of 5-methylcytidine in the anticodon arm of yeast tRNA(Phe): site-specific Mg2+ binding and coupled conformational transition in DNA analogs.

P. Agris, R. Guenther, V. Dao, 1992, Biochemistry.

Physical Chemistry of a Single tRNA-Modified Nucleoside Regulates Decoding of the Synonymous Lysine Wobble Codon and Affects Type 2 Diabetes.

S. Ranganathan, P. Agris, Srivathsan V Ranganathan, 2022, The journal of physical chemistry. B.

Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.

P. Agris, A. Szyk, P. Rekowski, 2001, Biochemistry.

Production of specific site probes of tRNA structure by enrichment with carbon 13 at particular locations.

P. Agris, J. Tompson, 1979, Nucleic acids research.

Metabolism of macromolecular methyl groups in Escherichia coli

P. Agris, J. Tompson, F. Hayashi, 1981, FEBS letters.

Cross-platform comparison of nucleic acid hybridization: toward quantitative reference standards.

P. Agris, Ken Halvorsen, 2014, Analytical biochemistry.

Sequence-Altered Peptide Adopts Optimum Conformation for Modification-Dependent Binding of the Yeast tRNAPhe Anticodon Domain

P. Agris, A. Szyk, P. Rekowski, 2004, The Protein Journal.

Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.

P. Agris, R. Guenther, E. Sochacka, 2000, Biochemistry.

Introducing folding stability into the score function for computational design of RNA‐binding peptides boosts the probability of success

C. Hall, P. Agris, Xingqing Xiao, 2016, Proteins.

Bringing order to translation: the contributions of transfer RNA anticodon‐domain modifications

P. Agris, 2008, EMBO reports.

Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNAMet

William D. Graham, Franck A. P. Vendeix, R. Kaiser, 2008, Nucleic Acids Research.

Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).

P. Agris, A. Małkiewicz, G. Leszczynska, 2012, Journal of molecular biology.

The nucleotide sequence of two bovine lens phenylalanine tRNAs. Possible activation of a new phenylalanine tRNA gene during differentiation of lens cells.

J. Horwitz, P. Agris, F. Lin, 1980, The Journal of biological chemistry.