C. H. da Silveira

发表

Protein cutoff scanning: A comparative analysis of cutoff dependent and cutoff free methods for prospecting contacts in proteins

Wagner Meira, Goran Neshich, Marcelo M Santoro, 2009, Proteins.

Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patterns

Wagner Meira, Raquel C de Melo-Minardi, Marcelo M Santoro, 2011, BMC Genomics.

ENZYMAP: Exploiting Protein Annotation for Modeling and Predicting EC Number Changes in UniProt/Swiss-Prot

C. H. da Silveira, M. Santoro, R. de Melo-Minardi, 2014, PloS one.

Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors

Goran Neshich, Ivan Mazoni, Marcelo M Santoro, 2010, BMC Structural Biology.

visGReMLIN: graph mining-based detection and visualization of conserved motifs at 3D protein-ligand interface at the atomic level

Sandro C. Izidoro, Raquel C. de Melo-Minardi, Alexandre V. Fassio, 2020, BMC Bioinformatics.

Profile of Myracrodruon urundeuva Volatile Compounds Ease of Extraction and Biodegradability and In Silico Evaluation of Their Interactions with COX-1 and iNOS

C. H. da Silveira, R. Augusti, J. Melo, 2022, Molecules.

Finding protein-protein interaction patterns by contact map matching.

G Neshich, R C Melo, C Ribeiro, 2007, Genetics and molecular research : GMR.

A contact map matching approach to protein structure similarity analysis.

Wagner Meira, Raquel C de Melo, Carlos Eduardo R Lopes, 2006, Genetics and molecular research : GMR.

A higher flexibility at the SARS-CoV-2 main protease active site compared to SARS-CoV and its potentialities for new inhibitor virtual screening targeting multi-conformers

R. S. Ferreira, A. Werhli, K. Machado, 2021, Journal of biomolecular structure & dynamics.

GAPIN: Grouped and Aligned Protein Interface Networks

Raquel C. de Melo-Minardi, Carlos H. da Silveira, João P. R. Romanelli, 2019, bioRxiv.

Thermostabilizing mechanisms of canonical single amino acid substitutions at a GH1 β‐glucosidase probed by multiple MD and computational approaches

K. Liedl, C. H. da Silveira, D. Mariano, 2022, Proteins.

Protein cutoff scanning: A comparative analysis of cutoff dependent and cutoff free methods for prospecting contacts in proteins

Douglas E. V. Pires, Wagner Meira, Jr, G. Neshich, 2009, Proteins.