J. Moresco

发表

Secretome of the Biocontrol Agent Metarhizium anisopliae Induced by the Cuticle of the Cotton Pest Dysdercus peruvianus Reveals New Insights into Infection

J. Yates, D. Calzolari, D. Passos, 2014, Journal of proteome research.

Proteomic Analysis of Peripheral Blood Mononuclear Cells after a High-Fat, High-Carbohydrate Meal with Orange Juice.

J. Diedrich, J. Yates, M. Rogero, 2017, Journal of proteome research.

Proteins that control the geometry of microtubules at the ends of cilia

Charles N. Baroud, J. Yates, L. Rice, 2018, The Journal of cell biology.

Proteomic analysis identifies highly expressed plasma membrane proteins for detection and therapeutic targeting of specific breast cancer subtypes

J. Yates, A. Nardulli, J. Moresco, 2018, Clinical Proteomics.

Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution

J. Yates, H. Madhani, J. Li, 2018, Cell.

Identifying components of protein complexes in C. elegans using co-immunoprecipitation and mass spectrometry.

John R Yates, Paulo C Carvalho, James J Moresco, 2010, Journal of proteomics.

Analysis of a cAMP regulated coactivator family reveals an alternative phosphorylation motif for AMPK family members

J. Vaughan, J. Yates, Tim Sonntag, 2017, PloS one.

A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells

C. Dieterich, J. Yates, F. Gebauer, 2017, Nature Communications.

Unbiased identification of trans regulators of ADAR and A-to-I RNA editing

J. Yates, Jin Billy Li, Qin Li, 2019, bioRxiv.

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

Yu-Cheng T. Yang, Andy T. Kong, J. Yates, 2013, Genome Biology.

A systems mechanism for KRAS mutant allele–specific responses to targeted therapy

J. Diedrich, A. Shaw, T. McFall, 2019, Science Signaling.

Off-Line Multidimensional Liquid Chromatography and Auto Sampling Result in Sample Loss in LC/LC–MS/MS

J. Yates, Tadashi Yamamoto, J. Moresco, 2014, Journal of proteome research.

Proteomics Profiling of KAIMRC1 in Comparison to MDA-MB231 and MCF-7

J. Diedrich, J. Yates, J. Moresco, 2020, International journal of molecular sciences.

Quantitative mass spectrometry as a tool for nutritional proteomics.

J. Yates, M. Dong, J. Moresco, 2008, The American journal of clinical nutrition.

Integration of Breast Cancer Secretomes with Clinical Data Elucidates Potential Serum Markers for Disease Detection, Diagnosis, and Prognosis

J. Yates, A. Nardulli, J. Moresco, 2016, PloS one.

Ciliary extracellular vesicles are distinct from the cytosolic extracellular vesicles

J. Yates, S. Nauli, Ashraf M. Mohieldin, 2021, Journal of extracellular vesicles.

In vivo activation of a conserved microRNA program induces mammalian heart regeneration.

M. Giacca, J. Yates, I. Sancho-Martinez, 2014, Cell stem cell.

A systems mechanism for KRAS mutant allele–specific responses to targeted therapy

J. Diedrich, A. Shaw, T. McFall, 2018, Science Signaling.

Proteomic Profile of Cryptococcus neoformans Biofilm Reveals Changes in Metabolic Processes

J. Yates, L. Santi, W. Beys-da-Silva, 2014, Journal of proteome research.

The circadian E3 ligase complex SCFFBXL3+CRY targets TLK2

J. Yates, K. Lamia, J. Moresco, 2019, Scientific Reports.

transcriptional repression of Wnt target genes-catenin proteolysis and β-Catenin interacts with APC to regulate α Material Supplemental

J. Yates, J. Moresco, S. Choi, 2013 .

Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing

J. Yates, C. Shao, J. I. Izpisúa Belmonte, 2022, Nature Communications.

Venomous extract protein profile of Brazilian tarantula Grammostola iheringi: searching for potential biotechnological applications.

J. Yates, J. Moresco, M. H. Borges, 2016, Journal of proteomics.

RNA promotes phase separation of glycolysis enzymes into yeast G bodies in hypoxia

J. Yates, John K. Kim, T. Han, 2019, bioRxiv.

Intracellular Action of a Secreted Peptide Required for Fungal Virulence.

Christina A. Cuomo, J. Diedrich, J. Yates, 2016, Cell host & microbe.

Hexokinase 3 enhances myeloid cell survival via non-glycolytic functions

J. Yates, B. Torbett, M. Tschan, 2022, Cell Death & Disease.

RNPS1 inhibits excessive tumor necrosis factor/tumor necrosis factor receptor signaling to support hematopoiesis in mice

Junmei Wang, B. Beutler, E. Moresco, 2022, Proceedings of the National Academy of Sciences of the United States of America.

The KLDpT activation loop motif is critical for MARK kinase activity

J. Yates, Tim Sonntag, M. Montminy, 2019, PloS one.

Glycolytic Enzymes Coale sce in G Bodies under Hypoxic Stress Graphical Abstract Highlights

J. Yates, John K. Kim, D. Klionsky, 2022 .

A non-Dicer RNase III and four other novel factors required for RNAi-mediated transposon suppression in the human pathogenic yeast C. neoformans

J. Diedrich, J. Yates, H. Madhani, 2019, bioRxiv.

A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast Cryptococcus neoformans.

J. Diedrich, J. Yates, H. Madhani, 2019, G3.

Comparative proteomic analysis of the aging soleus and extensor digitorum longus rat muscles using TMT labeling and mass spectrometry.

J. Yates, S. Hirabara, J. Moresco, 2013, Journal of proteome research.

Spliceosome profiling visualizes the operations of a dynamic RNP in vivo at nucleotide resolution

J. Yates, H. Madhani, J. Li, 2017, bioRxiv.

A gene-specific role for the Ssu72 RNAPII CTD phosphatase in HIV-1 Tat transactivation

J. Karn, J. Yates, J. Moresco, 2014, Genes & development.

Tat transactivation A gene-specific role for the Ssu 72 RNAPII CTD phosphatase in HIV-1 Material Supplemental

Katherine A. Jones, J. Karn, J. Yates, 2014 .

Insulin secretion deficits in a Prader-Willi syndrome β-cell model are associated with a concerted downregulation of multiple endoplasmic reticulum chaperones

Simon C Watkins, J. Diedrich, J. Yates, 2022, bioRxiv.

CBD-1 organizes two independent complexes required for eggshell vitelline layer formation and egg activation in C. elegans.

J. Diedrich, J. Yates, M. Harrison, 2018, Developmental biology.

CBD-1 scaffolds two independent complexes required for eggshell vitelline layer formation and egg activation in C. elegans

J. Diedrich, J. Yates, M. Harrison, 2018, bioRxiv.

Loss of MAGEL2 in Prader-Willi syndrome leads to decreased secretory granule and neuropeptide production

J. Diedrich, J. Yates, M. Talkowski, 2020, JCI insight.

Resource Spliceosome Profiling Visualizes Operations of a Dynamic RNP at Nucleotide Resolution Graphical

J. Yates, H. Madhani, J. Li, 2018 .

PTPN22 phosphorylation acts as a molecular rheostat for the inhibition of TCR signaling

J. Yates, N. Bottini, W. Kiosses, 2020, Science Signaling.

A short ORF-encoded transcriptional regulator

P. Schultz, J. Diedrich, A. Saghatelian, 2021, Proceedings of the National Academy of Sciences.

Paip2 cooperates with Cbp80 at an active promoter and participates in RNA Polymerase II phosphorylation in Drosophila

J. Yates, J. Moresco, P. Schedl, 2019, FEBS letters.

Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0

John R Yates, Diogo B Lima, Paulo C Carvalho, 2015, Nature Protocols.

Glycolytic Enzymes Coalesce in G Bodies under Hypoxic Stress.

J. Yates, John K. Kim, D. Klionsky, 2017, Cell reports.

Argonautes Promote Male Fertility and Provide a Paternal Memory of Germline Gene Expression in C. elegans

C. Mello, J. Yates, D. Conte, 2013, Cell.

The RNA phosphatase PIR-1 regulates endogenous small RNA pathways in C. elegans

C. Mello, J. Yates, D. Conte, 2020, bioRxiv.

A Ribonuclease Coordinates siRNA Amplification and mRNA Cleavage during RNAi

C. Mello, J. Yates, S. Mitani, 2015, Cell.

Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline.

Pedro J. Batista, C. Mello, J. Yates, 2009, Molecular cell.

SNPC-1.3 is a sex-specific transcription factor that drives male piRNA expression in C. elegans

M. Schatz, J. Yates, John K. Kim, 2020, bioRxiv.

An APEX2 proximity ligation method for mapping interactions with the nuclear lamina

J. Yates, S. Adam, R. Goldman, 2020, The Journal of cell biology.

The versatility of Ascorbate Peroxidase-aided mapping uncovers insights of the nuclear lamina interactions and function

J. Yates, S. Adam, R. Goldman, 2020, bioRxiv.

Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2

B. Blencowe, J. Diedrich, J. Yates, 2021, bioRxiv.

An Mtr4/ZFC3H1 complex facilitates turnover of unstable nuclear RNAs to prevent their cytoplasmic transport and global translational repression

J. Yates, Wencheng Li, B. Tian, 2017, Genes & development.

Primate-Specific ORF0 Contributes to Retrotransposon-Mediated Diversity

F. Gage, Jiao Ma, J. Diedrich, 2015, Cell.

Mps1Mph1 Kinase Phosphorylates Mad3 to Inhibit Cdc20Slp1-APC/C and Maintain Spindle Checkpoint Arrests

J. Yates, J. Rappsilber, K. Paraskevopoulos, 2016, PLoS genetics.

Mps1Mph1 Kinase Phosphorylates Mad3 to Inhibit Cdc20Slp1-APC/C and Maintain Spindle Checkpoint Arrests

John, J. Yates, J. Rappsilber, 2016, PLoS genetics.

The proper connection between shelterin components is required for telomeric heterochromatin assembly

J. Yates, S. Jia, J. Moresco, 2016, Genes & development.

Title Impact of Childcare and Eldercare on Off-farm Activities in Rural China Permalink

J. Yates, S. Jia, J. Moresco, 2016 .

A histone H3K9M mutation traps histone methyltransferase Clr4 to prevent heterochromatin spreading

Stuart J. Andrews, J. Yates, S. Jia, 2016, eLife.

Stalled Spliceosomes Are a Signal for RNAi-Mediated Genome Defense

D. Bartel, J. Yates, H. Madhani, 2013, Cell.

Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1

J. Yates, John K. Kim, Vishal Khivansara, 2015, Proceedings of the National Academy of Sciences.

Product Binding Enforces the Genomic Specificity of a Yeast Polycomb Repressive Complex

J. Yates, H. Madhani, B. Strahl, 2015, Cell.

The GAGA factor regulatory network: Identification of GAGA factor associated proteins

J. Yates, J. Moresco, P. Georgiev, 2017, PloS one.

α-Catenin interacts with APC to regulate β-catenin proteolysis and transcriptional repression of Wnt target genes

J. Yates, K. Jones, J. Moresco, 2013, Genes & development.

NRDE-2, the human homolog of fission yeast Nrl1, prevents DNA damage accumulation in human cells

J. Yates, J. Manley, J. Moresco, 2018, RNA biology.

Function of the MYND Domain and C-Terminal Region in Regulating the Subcellular Localization and Catalytic Activity of the SMYD Family Lysine Methyltransferase Set5

J. Yates, J. Moresco, D. Jaiswal, 2019, Molecular and Cellular Biology.

Time-resolved proteomic profile of Amblyomma americanum tick saliva during feeding

J. Diedrich, J. Yates, I. da Silva Vaz, 2019, bioRxiv.

The Proper Splicing of RNAi Factors Is Critical for Pericentric Heterochromatin Assembly in Fission Yeast

Stuart J. Andrews, J. Yates, S. Jia, 2014, PLoS genetics.

Plasma Membrane Proteomics of Human Breast Cancer Cell Lines Identifies Potential Targets for Breast Cancer Diagnosis and Treatment

J. Yates, A. Nardulli, J. Moresco, 2014, PloS one.

CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3′ processing

John R Yates, Jernej Ule, Lingjie Weng, 2014, Genes & development.

Control of seed dormancy and germination by DOG1-AHG1 PP2C phosphatase complex via binding to heme

J. Yates, T. Yamazaki, J. Schroeder, 2018, Nature Communications.

Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments.

Lisa M. Ryno, A. Su, J. Yates, 2013, Cell reports.

TFG facilitates outer coat disassembly on COPII transport carriers to promote tethering and fusion with ER–Golgi intermediate compartments

R. Schekman, J. Yates, A. Audhya, 2017, Proceedings of the National Academy of Sciences.

The Heterotaxy Gene CCDC11 is Essential for Cytokinesis and Cell-Cell Adhesion via RhoA Regulation

J. Yates, M. Khokha, M. Mahjoub, 2018, bioRxiv.

Ixodes scapularis Tick Saliva Proteins Sequentially Secreted Every 24 h during Blood Feeding

J. Yates, I. da Silva Vaz, J. Moresco, 2016, PLoS neglected tropical diseases.

A single vertebrate DNA virus protein disarms invertebrate immunity to RNA virus infection

Michael E. Sparks, C. Mello, J. Yates, 2014, eLife.

DNA damage shifts circadian clock time via Hausp-dependent Cry1 stabilization

J. Yates, K. Lamia, J. Moresco, 2015, eLife.

Tls1 regulates splicing of shelterin components to control telomeric heterochromatin assembly and telomere length

Stuart J. Andrews, J. Yates, S. Jia, 2014, Nucleic acids research.

CPSF 30 and Wdr 33 directly bind to AAUAAA in mammalian mRNA 3 9 processing

J. Ule, J. Yates, Lingjie Weng, 2014 .

SHMT2 and the BRCC36/BRISC deubiquitinase regulate HIV-1 Tat K63-ubiquitylation and destruction by autophagy

J. Diedrich, J. Yates, K. Jones, 2018, PLoS pathogens.

Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation

J. Yates, J. Moresco, B. Zid, 2021, bioRxiv.

Overlapping and distinct functions of CstF64 and CstF64τ in mammalian mRNA 3′ processing

J. Yates, Xiaohui Xie, Lingjie Weng, 2013, RNA.

Multiple inputs control sulfur-containing amino acid synthesis in Saccharomyces cerevisiae

Anjali D. Zimmer, J. Yates, J. Rine, 2014, Molecular biology of the cell.

TargetSeeker-MS: A Computational Method for Drug Target Discovery using Protein Separation Coupled to Mass Spectrometry

J. Diedrich, J. Yates, S. Martínez-Bartolomé, 2019, bioRxiv.

Quantitative proteomics of parotid saliva in primary Sjögren's syndrome

M. Gucek, J. E. Melvin, J. Moresco, 2012, Proteomics.

A genome-edited β-cell model of Prader-Willi syndrome reveals chronic deficits in endoplasmic reticulum chaperones and insulin secretion

Simon C Watkins, J. Diedrich, J. Yates, 2021 .

processing ′ mammalian mRNA 3 in τ Overlapping and distinct functions of CstF 64 and CstF 64 Material Supplemental

J. Yates, Xiaohui Xie, Lingjie Weng, 2013 .

Mass spectrometry-based shotgun proteomic analysis of C. elegans protein complexes.

A. Pasquinelli, J. Yates, A. Dillin, 2014, WormBook : the online review of C. elegans biology.

Ccdc11 is a novel centriolar satellite protein essential for ciliogenesis and establishment of left–right asymmetry

J. Yates, M. Mahjoub, J. Moresco, 2016, Molecular biology of the cell.

Noncanoncial signal recognition particle RNAs in a major eukaryotic phylum revealed by purification of SRP from the human pathogen Cryptococcus neoformans

J. Yates, H. Madhani, M. A. Rosenblad, 2015, Nucleic acids research.

Anti-silencing factor Epe1 associates with SAGA to regulate transcription within heterochromatin

J. Yates, S. Jia, J. Moresco, 2018, Genes & development.

BRCA1/BARD1-dependent ubiquitination of NF2 regulates Hippo-YAP1 signaling

J. Diedrich, I. Verma, G. Pao, 2019, Proceedings of the National Academy of Sciences.

Correction for Hanna et al., TFG facilitates outer coat disassembly on COPII transport carriers to promote tethering and fusion with ER–Golgi intermediate compartments

J. Moresco, Adam J. Johnson, Michael G. Hanna, 2017, Proceedings of the National Academy of Sciences.

Regulated nuclear accumulation of a histone methyltransferase times the onset of heterochromatin formation in C. elegans embryos

S. Mango, D. Hall, J. Yates, 2018, Science Advances.

Identification and characterization of proteins that form the inner core Ixodes scapularis tick attachment cement layer

J. Moresco, A. Gaithuma, A. Mulenga, 2022, Scientific reports.

Mitogenic Signals Stimulate the CREB Coactivator CRTC3 through PP2A Recruitment

Young-sil Yoon, J. Vaughan, J. Yates, 2018, iScience.

A novel Rac1 GAP splice variant relays poly-Ub accumulation signals to mediate Rac1 inactivation

J. Yates, E. Masliah, Timothy Y. Huang, 2013, Molecular biology of the cell.

Identification of myosin II as a cripto binding protein and regulator of cripto function in stem cells and tissue regeneration.

J. Diedrich, W. Fischer, J. Moresco, 2019, Biochemical and biophysical research communications.

Proteomic Identification Reveals the Role of Ciliary Extracellular‐Like Vesicle in Cardiovascular Function

J. Yates, S. Nauli, Ashraf M. Mohieldin, 2020, Advanced science.

HSF-1–mediated cytoskeletal integrity determines thermotolerance and life span

Peter M. Douglas, J. Yates, G. Manning, 2014, Science.

Perm1 regulates CaMKII activation and shapes skeletal muscle responses to endurance exercise training

J. Yates, A. Russell, E. Saez, 2019, Molecular metabolism.

The Potassium Chloride Cotransporter KCC-2 Coordinates Development of Inhibitory Neurotransmission and Synapse Structure in Caenorhabditis elegans

B. Forbush, J. Moresco, M. Koelle, 2009, The Journal of Neuroscience.

Census 2: isobaric labeling data analysis

Harshil Shah, John R. Yates, Xuemei Han, 2014, Bioinform..

Ist1 regulates ESCRT-III assembly and function during multivesicular endosome biogenesis in Caenorhabditis elegans embryos

J. Yates, N. Volkmann, A. Audhya, 2017, Nature Communications.

Exploring protein myristoylation in Toxoplasma gondii.

J. Yates, J. Moresco, M. Corvi, 2019, Experimental parasitology.

Control of seed dormancy and germination by DOG1-AHG1 PP2C phosphatase complex via binding to heme

J. Yates, T. Yamazaki, J. Schroeder, 2018, Nature Communications.

The circadian E3 ligase complex SCFFBXL3+CRY targets TLK2

J. Yates, K. Lamia, J. Moresco, 2019, Scientific Reports.

Regulation of Serotonin Biosynthesis by the G Proteins Gαo and Gαq Controls Serotonin Signaling in Caenorhabditis elegans

James J. Moresco, Robert A Lindquist, J. Moresco, 2008, Genetics.

Activation of EGL-47, a Gαo-Coupled Receptor, Inhibits Function of Hermaphrodite-Specific Motor Neurons to Regulate Caenorhabditis elegans Egg-Laying Behavior

J. Moresco, M. Koelle, 2004, The Journal of Neuroscience.

ANKRD16 prevents neuron loss caused by an editing-defective tRNA synthetase

J. Yates, S. Ackerman, K. Fredrick, 2018, Nature.

A non-acidic method using hydroxyapatite and phosphohistidine monoclonal antibodies allows enrichment of phosphopeptides containing non-conventional phosphorylations for mass spectrometry analysis

J. Diedrich, J. Yates, T. Hunter, 2019, bioRxiv.

Intrinsic mesoscale properties of a Polycomb protein underpin heterochromatin fidelity

J. Diedrich, H. Madhani, K. Armache, 2023, Nature Structural & Molecular Biology.

A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells

C. Dieterich, J. Yates, F. Gebauer, 2017, Nature Communications.

Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation

B. Beutler, P. Azadi, R. Song, 2023, Nature communications.

Ck2-Dependent Phosphorylation Is Required to Maintain Pax7 Protein Levels in Proliferating Muscle Progenitors

J. Yates, J. Moresco, Francisco Bustos, 2016, PloS one.

Differential Precipitation of Proteins: A Simple Protein Fractionation Strategy to Gain Biological Insights with Proteomics.

J. Diedrich, J. Moresco, Antonio F. M. Pinto, 2023, Journal of the American Society for Mass Spectrometry.

Wiskott-Aldrich Syndrome Protein Regulates Nucleolar Organization and Function in Innate Immune Response

Juan Carlos Izpisúa Belmonte, F. Alkuraya, J. Moresco, 2023, bioRxiv.

A single vertebrate DNA virus protein disarms invertebrate immunity to RNA virus infection

Michael E. Sparks, C. Mello, J. Yates, 2014, eLife.

A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast Cryptococcus neoformans

J. Diedrich, J. Yates, H. Madhani, 2019, G3: Genes, Genomes, Genetics.

Mps1 Kinase Phosphorylates Mad3 to Inhibit Cdc20-APC/C and Maintain Spindle Checkpoint Arrests

J. Rappsilber, J. Moresco, K. Hardwick, 2018 .

Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2

B. Blencowe, J. Diedrich, J. Yates, 2023, Nature Cell Biology.

Arg-tRNA synthetase links inflammatory metabolism to 1 RNA splicing via nuclear condensates 2

B. Blencowe, J. Diedrich, A. Lambowitz, 2021 .

Argonautes Promote Male Fertility and Provide a Paternal Memory of Germline Gene Expression in C. elegans

C. Mello, J. Yates, D. Conte, 2013, Cell.

Stress-independent activation of XBP1s and/or ATF6 reveals three functionally diverse ER proteostasis environments.

Lisa M. Ryno, A. Su, Chunlei Wu, 2013, Cell reports.

Cross-editing by a tRNA synthetase allows vertebrates to abundantly express mischargeable tRNA without causing mistranslation

J. Diedrich, T. Pan, J. Moresco, 2020, Nucleic acids research.