V. Joardar

发表

Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle

Evgeny M. Zdobnov, Dan Graur, Christine G. Elsik, 2010, Proceedings of the National Academy of Sciences.

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

Jaideep P. Sundaram, Samuel V. Angiuoli, Joana C. Silva, 2008, PLoS genetics.

Whole genome comparison of Aspergillus flavus L-morphotype strain NRRL 3357 (type) and S-morphotype strain AF70

W. Nierman, Jiujiang Yu, D. Bhatnagar, 2018, PloS one.

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000

Jia Liu, Alan Collmer, C Robin Buell, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Identification of Pseudomonas syringae pv. tomato genes induced during infection of Arabidopsis thaliana

J. Boch, V. Joardar, B. Kunkel, 2002, Molecular microbiology.

Whole genome comparison of the A. fumigatus family.

Samuel V. Angiuoli, B. Haas, O. White, 2006, Medical mycology.

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv . tomato DC 3000

Ian T. Paulsen, C. Robin Buell, Alan Collmer, 2003 .

Identification of novel hrp‐regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome

Sheng Yang He, S. He, K. Nomura, 2002, Molecular microbiology.

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

Robert M. Waterhouse, Gloria I. Giraldo-Calderón, Daniel R. Caffrey, 2016, Nature Communications.

Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability

W. Nierman, G. Payne, O. Abolude, 2012, BMC Genomics.

Title Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis , its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control Permalink

D. Radune, J. Badger, Y. Peer, 2012 .

The Arabidopsis thaliana JASMONATE INSENSITIVE 1 gene is required for suppression of salicylic acid-dependent defenses during infection by Pseudomonas syringae.

V. Joardar, B. Kunkel, Ian H Street, 2006, Molecular plant-microbe interactions : MPMI.

Lineage-specific regions in Pseudomonas syringae pv tomato DC3000.

C. Buell, David J. Schneider, A. Collmer, 2005, Molecular plant pathology.

Genetic Analysis Using an Isogenic Mating Pair of Aspergillus fumigatus Identifies Azole Resistance Genes and Lack of MAT Locus’s Role in Virulence

W. Nierman, S. Pakala, V. Joardar, 2015, PLoS pathogens.

Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogen Rhizoctonia solani AG-3.

R. Dean, W. Nierman, S. Shabalina, 2014, FEMS microbiology letters.

Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

Andriy Kovalchuk, Kaj Albermann, Christian Wagner, 2008, Nature Biotechnology.

A comparative view of the genome of Aspergillus fumigatus.

W. Nierman, J. Wortman, G. Turner, 2007 .

Improved reference genome of Aedes aegypti informs arbovirus vector control

Sergey Koren, Adam M. Phillippy, Li Zhao, 2018, Nature.

Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability

W. Nierman, G. Payne, S. Pakala, 2012, BMC Genomics.

Draft Genome Sequence of the Plant-Pathogenic Soil Fungus Rhizoctonia solani Anastomosis Group 3 Strain Rhs1AP

R. Dean, W. Nierman, S. Pakala, 2014, Genome Announcements.

Mouse genome annotation by the RefSeq project

Mathew W. Wright, Kelly M. McGarvey, Lillian D. Riddick, 2015, Mammalian Genome.

Transposition Pathovars in Genes Involved in Virulence 1448 A Reveals Divergence among pv . phaseolicola Pseudomonas syringae Whole-Genome Sequence Analysis of

O. White, T. Creasy, C. Fraser, 2005 .

What can comparative genomics tell us about species concepts in the genus Aspergillus?

R. Dean, W. Nierman, J. Wortman, 2007, Studies in mycology.

Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

Ujjwal Kumar, Justin Johnson, Daniel Brami, 2011, Genome Biology.

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

Wen J. Li, Brian Smith-White, Tatiana A. Tatusova, 2015, Nucleic Acids Res..

The 2008 update of the Aspergillus nidulans genome annotation: a community effort.

Bernard Henrissat, Jibin Sun, Masashi Kato, 2009, Fungal genetics and biology : FG & B.

The Mouseion at the JAXlibrary

Carol J. Bult, John Jackson, Mark Diekhans, 2022 .

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

Sergey Koren, Li Zhao, Sanjit S. Batra, 2017, bioRxiv.

A joint NCBI and EMBL-EBI transcript set for clinical genomics and research

Jonathan M. Mudge, Daniel N. Murphy, Kelly M. McGarvey, 2022, Nature.

A Rickettsia Genome Overrun by Mobile Genetic Elements Provides Insight into the Acquisition of Genes Characteristic of an Obligate Intracellular Lifestyle

B. Walenz, B. Sobral, V. Nene, 2011, Journal of bacteriology.

Large-Scale Transcriptional Response to Hypoxia in Aspergillus fumigatus Observed Using RNAseq Identifies a Novel Hypoxia Regulated ncRNA

W. Nierman, S. Pakala, B. Barker, 2014, Mycopathologia.

UV Irradiation and Desiccation Modulate the Three-dimensional Extracellular Matrix of Nostoc commune (Cyanobacteria)*

R. Helm, M. Potts, A. Warren, 2005, Journal of Biological Chemistry.

Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.

Monica Vencato, Alan Collmer, C Robin Buell, 2006, Molecular plant-microbe interactions : MPMI.

Large-Scale Transcriptional Response to Hypoxia in Aspergillus fumigatus Observed Using RNAseq Identifies a Novel Hypoxia Regulated ncRNA

W. Nierman, S. Pakala, B. Barker, 2014, Mycopathologia.

Mouse genome annotation by the RefSeq project

Kim D. Pruitt, Mathew W. Wright, Eric Cox, 2015, Mammalian Genome.

Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle

Robert M. Waterhouse, Shelby L. Bidwell, Allison A. Regier, 2010, Proceedings of the National Academy of Sciences.

What can comparative genomics tell us about species concepts in the genus Aspergillus?

W. Nierman, J. Wortman, G. Payne, 2007, Studies in Mycology.