J. Cooke

发表

Mountain pine beetle host-range expansion threatens the boreal forest

D. Coltman, B. Cooke, C. Cullingham, 2011, Molecular ecology.

Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters

James E. Johnson, M. Marra, A. Siddiqui, 2005, BMC Genomics.

Characterizing the physical and genetic structure of the lodgepole pine × jack pine hybrid zone: mosaic structure and differential introgression

D. Coltman, C. Cullingham, J. Cooke, 2012, Evolutionary applications.

Linking genotype to phenotype to identify genetic variation relating to host susceptibility in the mountain pine beetle system

D. Coltman, C. Cullingham, J. Cooke, 2019, Evolutionary applications.

How the Mountain Pine Beetle (Dendroctonus ponderosae) Breached the Canadian Rocky Mountains

D. Coltman, C. Keeling, J. Bohlmann, 2014, Molecular biology and evolution.

Fine-scale genetic diversity and relatedness in fungi associated with the mountain pine beetle

R. Hamelin, Amanda D. Roe, J. Cooke, 2019, Canadian Journal of Forest Research.

Draft Fine-scale genetic structure and relatedness in fungi associated with the mountain pine beetle

R. Hamelin, Amanda D. Roe, J. Cooke, 2019 .

A novel application of RNase H2-dependent quantitative PCR for detection and quantification of Grosmannia clavigera, a mountain pine beetle fungal symbiont, in environmental samples

J. Cooke, C. McAllister, C. Fortier, 2018, Tree physiology.

From the inside out: fungal endophyte-grass associations and grassland communities.

J. Cooke, 2007, The New phytologist.

A White Spruce Gene Catalog for Conifer Genome Analyses1[W][OA]

P. Rigault, P. Lepage, J. Cooke, 2011, Plant Physiology.

Comparative genomics of the chitinase gene family in lodgepole and jack pines: contrasting responses to biotic threats and landscape level investigation of genetic differentiation

C. Cullingham, J. Cooke, C. McAllister, 2021, Botany.

Title: A white spruce gene catalogue for conifer genome analyses.

P. Rigault, P. Lepage, J. Cooke, 2011 .

Trees of the people: the growing science of poplars in Canada and worldwide1

S. Rood, J. Cooke, 2008 .

Trees of the people: the growing science of poplars in Canada and worldwideThis commentary is one of a selection of papers published in the Special Issue on Poplar Research in Canada.

S. Rood, J. Cooke, 2007 .

Traceability of provenance-collected lodgepole pine in a reforestation chain of custody case study

D. Coltman, C. Cullingham, J. Cooke, 2022, Tree Genetics & Genomes.

EFFECT OF WATER STRESS AND PLANT DEFENSE STIMULATION ON 1 MONOTERPENE EMISSION FROM A HISTORICAL AND A NEW PINE HOST OF 2 THE MOUNTAIN PINE BEETLE 3

J. Cooke, F. Blanchet, 2015 .

Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle

Amanda D. Roe, J. Cooke, F. Sperling, 2010, Molecular ecology resources.

Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine (Pinus banksiana)

Steven J. M. Jones, Nancy Y. Liao, J. Bohlmann, 2013, BMC Plant Biology.

Branching out: a new era of investigating physiological processes in forest trees using genomic tools.

Chung-Jui Tsai, J. Cooke, S. Harding, 2018, Tree physiology.

The dynamic nature of bud dormancy in trees: environmental control and molecular mechanisms.

Maria E. Eriksson, J. Cooke, O. Junttila, 2012, Plant, cell & environment.

Development of high‐density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

P. Rigault, F. Gagnon, J. Cooke, 2013, Molecular ecology resources.

Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding

R. Whetten, C. Plomion, B. Fady, 2017, Molecular ecology.

Genetic and genomic evidence of niche partitioning and adaptive radiation in mountain pine beetle fungal symbionts

R. Hamelin, A. Carroll, Amanda D. Roe, 2017, Molecular ecology.

Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees

M. Ouellet, A. Séguin, J. Cooke, 2010, BMC Plant Biology.

Cross-species outlier detection reveals different evolutionary pressures between sister species

D. Coltman, C. Cullingham, J. Cooke, 2014, The New phytologist.

Comparative phylogeography, genetic differentiation and contrasting reproductive modes in three fungal symbionts of a multipartite bark beetle symbiosis

D. Coltman, Amanda D. Roe, J. Cooke, 2011, Molecular ecology.

Spatial genetic structure of the mountain pine beetle (Dendroctonus ponderosae) outbreak in western Canada: historical patterns and contemporary dispersal

D. Coltman, J. Cooke, C. Davis, 2012, Molecular ecology.

Population structure and migration pattern of a conifer pathogen, Grosmannia clavigera, as influenced by its symbiont, the mountain pine beetle

J. Bohlmann, R. Hamelin, Amanda D. Roe, 2012, Molecular ecology.

Effects of introgression on the genetic population structure of two ecologically and economically important conifer species: lodgepole pine (Pinus contorta var. latifolia) and jack pine (Pinus banksiana).

D. Coltman, C. Cullingham, J. Cooke, 2013, Genome.

Report on the Forest Trees Workshop at the Plant and Animal Genome Conference

G. Tuskan, C. Plomion, J. Cooke, 2003, Comparative and functional genomics.

Population Structure of Mountain Pine Beetle Symbiont Leptographium longiclavatum and the Implication on the Multipartite Beetle-Fungi Relationships

R. Hamelin, Amanda D. Roe, J. Cooke, 2014, PloS one.

A species-diagnostic SNP panel for discriminating lodgepole pine, jack pine, and their interspecific hybrids

D. Coltman, C. Cullingham, J. Cooke, 2013, Tree Genetics & Genomes.

Spatial Community Structure of Mountain Pine Beetle Fungal Symbionts Across a Latitudinal Gradient

Amanda D. Roe, J. Cooke, P. James, 2011, Microbial Ecology.

Plant dormancy research: from environmental control to molecular regulatory networks.

Anil Kumar Singh, H. Yamane, J. Cooke, 2021, Tree physiology.

Translating mountain pine beetle genomics outputs into genomics-enhanced environmental and economic risk models

J. Cooke, 2011 .

Lodgepole pine, jack pine, and their hybrids: molecular markers reveal mountain pine beetle host-range expansion into jack pine of the boreal forest

D. Coltman, C. Cullingham, J. Cooke, 2011, BMC Proceedings.

Isolation and characterization of 16 microsatellite loci in the mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Curculionidae: Scolytinae)

B. Bentz, Amanda D. Roe, J. Cooke, 2009, Molecular Ecology Resources.

Gene mapping in white spruce (P. glauca): QTL and association studies integrating population and expression data

P. Rigault, J. Cooke, J. MacKay, 2011, BMC Proceedings.

A roadmap of apical bud formation in white spruce identifies potential regulators of time to bud set

J. Cooke, N. Isabel, S. Abrams, 2011 .

Population structure and migration pattern of a conifer pathogen, Grosmannia clavigera, as influenced by its symbiont, the mountain pine beetle

J. Bohlmann, R. Hamelin, Amanda D. Roe, 2012, Molecular ecology.

Effect of Water Stress and Fungal Inoculation on Monoterpene Emission from an Historical and a New Pine Host of the Mountain Pine Beetle

N. Erbilgin, J. Cooke, F. Blanchet, 2011, Journal of Chemical Ecology.

Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle

Amanda D. Roe, J. Cooke, F. Sperling, 2010, Molecular ecology resources.