J. Gurtowski

发表

Dual functions of Macpiwi1 in transposon silencing and stem cell maintenance in the flatworm Macrostomum lignano

M. Schatz, G. Hannon, Xin Zhou, 2015, RNA.

KBase: The United States Department of Energy Systems Biology Knowledgebase

Rick L. Stevens, James J. Davis, Kevin P. Keegan, 2018, Nature Biotechnology.

The pineapple genome and the evolution of CAM photosynthesis

David Sankoff, Yun Zheng, Chunfang Zheng, 2015, Nature Genetics.

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

John D McPherson, Elizabeth Tseng, Sara Goodwin, 2017, bioRxiv.

GenomeScope: Fast reference-free genome profiling from short reads

M. Schatz, F. Sedlazeck, J. Gurtowski, 2016, bioRxiv.

Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano

Osama El Demerdash, M. Schatz, G. Hannon, 2015, Proceedings of the National Academy of Sciences.

New whole genome de novo assemblies of three divergent strains of rice (O. sativa) documents novel gene space of aus and indica

Mark H. Wright, M. Schatz, W. McCombie, 2014, bioRxiv.

Molecular genetic diversity and characterization of conjugation genes in the fish parasite Ichthyophthirius multifiliis.

M. Schatz, D. Cassidy-Hanley, T. Clark, 2015, Molecular phylogenetics and evolution.

Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica

Doreen Ware, Michael C Schatz, Eric Antoniou, 2014, Genome Biology.

Hybrid assembly with long and short reads improves discovery of gene family expansions

Michael C. Schatz, Namrata Singh, Peter Tiffin, 2017, BMC Genomics.

GenomeScope: Fast reference-free genome profiling from short reads

Han Fang, Michael C. Schatz, Fritz J. Sedlazeck, 2016, bioRxiv.

Conservation Genomics of the Declining North American Bumblebee Bombus terricola Reveals Inbreeding and Selection on Immune Genes

M. Schatz, C. Kent, J. Gurtowski, 2018, Front. Genet..

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

Sara Goodwin, Michael C Schatz, James Gurtowski, 2015, bioRxiv.

Answering the demands of digital genomics

Michael C. Schatz, James Gurtowski, Matthew A. Titmus, 2014, Concurr. Comput. Pract. Exp..

The DOE Systems Biology Knowledgebase (KBase)

Fangfang Xia, Rick Stevens, Mark Gerstein, 2016, bioRxiv.

Third-generation sequencing and the future of genomics

Michael C. Schatz, Shoshana Marcus, Shinjae Yoo, 2016, bioRxiv.

Antibiotic pressure on the acquisition and loss of antibiotic resistance genes in Klebsiella pneumoniae

M. Schatz, K. Carroll, W. Timp, 2018, The Journal of antimicrobial chemotherapy.

Error correction and assembly complexity of single molecule sequencing reads

Shoshana Marcus, Shinjae Yoo, W. Richard McCombie, 2014, bioRxiv.