E. Timofeev

发表

Synthesis of 5′-deoxy-5′-ethoxycarbonylmethyl nucleosides, the precursors of oligonucleotides with the amide internucleoside bond C3′-NH-C(O)-CH2-C5′

V. L. Florent’ev, A. Varizhuk, S. Kochetkova, 2009, Russian Journal of Bioorganic Chemistry.

Regioselective immobilization of short oligonucleotides to acrylic copolymer gels.

V. Florentiev, A. Mirzabekov, S. Kochetkova, 1996, Nucleic acids research.

Partial thermodynamic parameters for prediction stability and washing behavior of DNA duplexes immobilized on gel matrix.

V. Florentiev, S. Kochetkova, E. Timofeev, 1996, Journal of biomolecular structure & dynamics.

Three-stranded clip of the oligonucleotide 5'-(dT)10pO(CH2CH2O)3p(dT)10pO(CH2CH2O)3p(dA)10-3'.

V. Florentiev, Y. Lysov, E. Timofeev, 1994, Antisense research and development.

Stabilization of parallel (recombinant) triplex with propidium iodide.

V. Florentiev, A. Mirzabekov, E. Timofeev, 1995, Journal of biomolecular structure & dynamics.

Oligodeoxynucleotides Containing N1‐Methyl‐2′‐Deoxyadenosine and N6‐Methyl‐2′‐Deoxyadenosine

Eric B. Roesch, P. Herdewijn, E. Timofeev, 2009, Current protocols in nucleic acid chemistry.

Protein-free parallel triple-stranded DNA complex formation.

V. Florentiev, T. Jovin, Y. Lysov, 2001, Nucleic acids research.

Methidium intercalator inserted into synthetic oligonucleotides

V. Florentiev, A. Mirzabekov, E. Timofeev, 1996 .

Intercalating Insert into Internucleotide Linkages as Way for Stabilization and Detection of of Short DNA Duplexes

V. Florentiev, S. Kochetkova, E. Timofeev, 1999 .

The R‐form of DNA does exist

V. Florentiev, E. Timofeev, I. A. Il’icheva, 1994, FEBS letters.

Evidence for the tetraplex structure of the d(GT) n repetitive sequences in solution

V. Florentiev, E. Timofeev, A. Shchyolkina, 1992, FEBS letters.

Preparation of Modified Combinatorial DNA Libraries via Emulsion PCR with Subsequent Strand Separation

E. Timofeev, S. Lapa, V. E. Kuznetsova, 2018, Molecular Biology.

Expanding the recognition interface of the thrombin-binding aptamer HD1 through modification of residues T3 and T12

F. Sica, N. Kolganova, E. Timofeev, 2021, Molecular therapy. Nucleic acids.

Amino-Functionalized Oligonucleotides with Peptide Internucleotide Linkages

V. Florentiev, A. Varizhuk, S. Kochetkova, 2012 .

Oligonucleotide Analogs with Peptide Internucleotide Linkages

V. Florentiev, A. Varizhuk, S. Kochetkova, 2011, Nucleosides, nucleotides & nucleic acids.

Oligonucleotides containing a peptide internucleotide linkage. A novel class of modified oligonucleotides

V. Florentiev, A. Varizhuk, S. Kochetkova, 2010, Russian Journal of Bioorganic Chemistry.

Oligonucleotide analogues containing internucleotide C3′-CH2-C(O)-NH-C5′ bonds

V. L. Florent’ev, A. Varizhuk, S. Kochetkova, 2009, Russian Journal of Bioorganic Chemistry.

Synthesis of 3′-deoxy-3′-carboxymethylnucleosides, precursors of oligonucleotides with an amide internucleoside bond

V. L. Florent’ev, A. Varizhuk, S. Kochetkova, 2009, Russian Journal of Bioorganic Chemistry.

Oligonucleotide analogues bearing an acyclonucleoside linked by an internucleotide amide bond

V. Florentiev, S. Kochetkova, N. Kolganova, 2008, Russian Journal of Bioorganic Chemistry.

Oligonucleotide analogues containing the internucleotide linker C3′-NH-CO-CH2-N(CH3)-C5′

V. L. Florent’ev, S. Kochetkova, N. Kolganova, 2008, Russian Journal of Bioorganic Chemistry.

Hydrogel microarray for detection of polymorphisms in the UGT1A1, DPYD, GSTP1 and ABCB1 genes.

M. Abramov, E. Timofeev, V. Mikhailovich, 2017, Cancer biomarkers : section A of Disease markers.

Oligonucleotides containing substituted 4-nitroindoles: Synthesis and study of their DNA duplexes

V. Florentiev, S. Kochetkova, N. Kolganova, 2008, Russian Journal of Bioorganic Chemistry.

Recognition of Base Pair Inversions in Duplex by Chimeric (α,β) Triplex-Forming Oligonucleotides

V. Florentiev, E. Timofeev, Baira Goryaeva, 2006 .

Determination of variations of the primary structure of the UGT1A1, DPYD, GSTP1, and ABCB1 genes involved in the metabolism of antitumor agents

E. Timofeev, V. Mikhailovich, R. Heydarov, 2017 .

Fluorescent Labeling of Oligonucleotide Probes for Double Indicator Microarray Hybridization Analysis

E. Timofeev, S. Lapa, A. Zasedatelev, 2019, Russian Journal of Bioorganic Chemistry.

Near-infrared heptamethine cyanine dyes. Synthesis, spectroscopic characterization, thermal properties and photostability

E. Timofeev, A. Zasedatelev, V. E. Kuznetsova, 2013 .

Emulsion PCR Amplification of DNA Libraries with Degenerate Central Regions for Aptamer Selection

E. Timofeev, S. Lapa, A. Zasedatelev, 2020, Russian Journal of Bioorganic Chemistry.

Parallel purine‐pyrimidine‐purine triplex: experimental evidence for existence

V. Florentiev, E. Timofeev, I. A. Il’icheva, 1995, FEBS letters.

Recognition Interface of the Thrombin Binding Aptamer Requires Antiparallel Topology of the Quadruplex Core

N. Kolganova, E. Timofeev, M. Sardushkin, 2021, Biomolecules.

Oligonucleotide analogues containing a C3′-NH-C(O)-CH2-C5′ amide internucleotide bond

V. L. Florent’ev, A. Varizhuk, S. Kochetkova, 2010, Russian Journal of Bioorganic Chemistry.

Immobilization of DNA in polyacrylamide gel for the manufacture of DNA and DNA-oligonucleotide microchips.

A. Mirzabekov, E. Timofeev, D. Proudnikov, 1998, Analytical biochemistry.

Synthesis, characterization and in vitro activity of thrombin-binding DNA aptamers with triazole internucleotide linkages.

V. Florentiev, A. Varizhuk, E. Timofeev, 2013, European journal of medicinal chemistry.

Anticoagulant Oligonucleotide–Peptide Conjugates: Identification of Thrombin Aptamer Conjugates with Improved Characteristics

N. Kolganova, E. Timofeev, V. Tsvetkov, 2022, International journal of molecular sciences.

Simple and Stereoselective Preparation of an 4‐(Aminomethyl)‐1,2,3‐triazolyl Nucleoside Phosphoramidite

V. Florentiev, N. Kolganova, E. Timofeev, 2011, Chemistry & biodiversity.

Mass-spectrometry analysis of modifications at DNA termini induced by DNA polymerases

N. Kolganova, E. Timofeev, A. Chudinov, 2017, Scientific Reports.

Targeting duplex DNA with chimeric α,β-triplex-forming oligonucleotides

A. V. Chudinov, V. Florentiev, N. Kolganova, 2012, Nucleic acids research.

New Indocyanine Derivatives for the Synthesis of Fluorescently Labeled Oligonucleotides

E. Timofeev, A. Zasedatelev, A. Chudinov, 2009 .

Oligodeoxynucleotides containing 2'-deoxy-1-methyladenosine and Dimroth rearrangement

P. Herdewijn, E. Timofeev, S. Mikhailov, 2007 .

Oligodeoxynucleotides Containing 2′-Deoxy-1-methyladenosine and Dimroth Rearrangement.

P. Herdewijn, E. Timofeev, S. Mikhailov, 2007 .

Oligodeoxynucleotides with extended zwitter-ionic internucleotide linkage

S. Kochetkova, N. Kolganova, E. Timofeev, 2001 .

New Indocyanine Derivatives for the Synthesis of Fluorescently Labeled Oligonucleotides.

E. Timofeev, A. Zasedatelev, A. Chudinov, 2009 .

Binding of Nonnatural α,β-Oligocytidylates with DNA Duplexes

V. Florentiev, S. Kochetkova, E. Timofeev, 2004, Molecular Biology.

Structural Polymorphism of Oligo(dC) with Mixed α,β-Anomeric Backbone

E. Timofeev, O. Borisova, A. K. Shchyolkina, 2000 .

Advanced method for oligonucleotide deprotection.

A. Mirzabekov, B. Chernov, E. Timofeev, 2000, Nucleic acids research.

Bridge DNA amplification of cancer-associated genes on cross-linked agarose microbeads

N. Kolganova, E. Timofeev, A. Zasedatelev, 2015, Microchimica Acta.

The Toolbox for Modified Aptamers

E. Timofeev, S. Lapa, A. Chudinov, 2016, Molecular Biotechnology.

Conformational Changes Induced in the Human Protein Translin and in the Single-stranded Oligodeoxynucleotides d(GT)12 and d(TTAGGG)5 Upon Binding of These Oligodeoxynucleotides by Translin

H. Manor, E. Timofeev, A. Shchyolkina, 2005, Journal of biomolecular structure & dynamics.

DNA sequence analysis by hybridization with oligonucleotide microchips: MALDI mass spectrometry identification of 5mers contiguously stacked to microchip oligonucleotides.

A. Mirzabekov, R. Cotter, E. Timofeev, 2000, Nucleic acids research.

Fabrication of microarray of gel-immobilized compounds on a chip by copolymerization.

A. Mirzabekov, V. Shick, E. Timofeev, 1999, BioTechniques.

Mononucleotide repeat expansions with non-natural polymerase substrates

N. Kolganova, E. Timofeev, S. Lapa, 2021, Scientific Reports.

[Dimers of DNA triplexes].

V. L. Florent’ev, E. Timofeev, O. Borisova, 1995, Молекулярная биология.

Anomeric DNA quadruplexes

V. Florentiev, A. Varizhuk, N. Kolganova, 2014, Artificial DNA, PNA & XNA.

Synthesis , characterization and in vitro activity of thrombin-binding DNA aptamers with triazole internucleotide linkages Anna

V. Florentiev, E. Timofeev, V. Tsvetkov, 2013 .

Preparation of Modified Combinatorial DNA Libraries via Emulsion PCR with Subsequent Strand Separation

E. Timofeev, S. Lapa, V. E. Kuznetsova, 2018, Molecular Biology.

Derivatization of a rigid meso-substituted heptamethine cyanine dye

E. Timofeev, S. Lapa, A. Zasedatelev, 2021 .

A Universal Base in a Specific Role: Tuning up a Thrombin Aptamer with 5-Nitroindole

A. Varizhuk, N. Kolganova, E. Timofeev, 2015, Scientific Reports.

Comparison of the ‘Chemical’ and ‘Structural’ Approaches to the Optimization of the Thrombin-Binding Aptamer

D. Klinov, A. Varizhuk, E. Timofeev, 2014, PloS one.

Binding specificity and stability of duplexes formed by modified oligonucleotides with a 4096-hexanucleotide microarray.

A. Mirzabekov, E. Timofeev, 2001, Nucleic acids research.

Slippage of the Primer Strand in the Primer Extension Reaction with Modified 2'-Deoxyuridine Triphosphates

E. Timofeev, S. Lapa, V. E. Kuznetsova, 2020, Russian journal of bioorganic chemistry.

Novel 5-Alkylcarboxamide-2'-Deoxyuridine-5'-Triphosphates for Enzymatic Synthesis of Highly Modified DNA

E. Timofeev, S. Lapa, A. Zasedatelev, 2019, Russian Journal of Bioorganic Chemistry.

DNA sequencing by hybridization to microchip octa-and decanucleotides extended by stacked pentanucleotides.

A. Mirzabekov, V. Barsky, E. Timofeev, 1996, Nucleic acids research.

Factors Affecting the Tailing of Blunt End DNA with Fluorescent Pyrimidine dNTPs

N. Kolganova, E. Timofeev, S. Lapa, 2018, Molecular Biotechnology.

Structural and functional analysis of biopolymers and their complexes: Enzymatic synthesis of high-modified DNA

A. Archakov, E. Timofeev, S. Lapa, 2017, Molecular Biology.

Emulsion PCR Amplification of DNA Libraries with Degenerate Central Regions for Aptamer Selection

E. Timofeev, S. Lapa, A. Zasedatelev, 2020, Russian Journal of Bioorganic Chemistry.

Folding topology, structural polymorphism, and dimerization of intramolecular DNA G-quadruplexes with inverted polarity strands and non-natural loops.

N. Kolganova, E. Timofeev, I. Smirnov, 2020, International journal of biological macromolecules.