J. Penadés

发表

The Peptidoglycan Hydrolase of Staphylococcus aureus Bacteriophage ϕ11 Plays a Structural Role in the Viral Particle

Lorena Rodríguez-Rubio, Nuria Quiles-Puchalt, B. Martínez, 2013, Applied and Environmental Microbiology.

Staphylococcus aureus Pathogenicity Island DNA Is Packaged in Particles Composed of Phage Proteins

J. Calvete, C. Ubeda, I. Lasa, 2008, Journal of bacteriology.

Moonlighting bacteriophage proteins derepress staphylococcal pathogenicity islands

I. Lasa, A. Shrestha, S. Campoy, 2010, Nature.

Sip, an integrase protein with excision, circularization and integration activities, defines a new family of mobile Staphylococcus aureus pathogenicity islands

Iñigo Lasa, C. Ubeda, I. Lasa, 2003, Molecular microbiology.

Bacteriophage-mediated spread of bacterial virulence genes.

Nuria Quiles-Puchalt, J. Penadés, R. Novick, 2015, Current opinion in microbiology.

Transfer of Antibiotic Resistance in Staphylococcus aureus.

H. Ingmer, J. Penadés, J. Haaber, 2017, Trends in microbiology.

The Phage-Inducible Chromosomal Islands: A Family of Highly Evolved Molecular Parasites.

J. Penadés, G. Christie, 2015, Annual review of virology.

Evolutionary Genomics of Staphylococcus aureus Reveals Insights into the Origin and Molecular Basis of Ruminant Host Adaptation

Jason Hinds, Andrew Rambaut, Katherine A. Gould, 2010, Genome biology and evolution.

J. Penadés, R. Novick, G. Christie, 2010, Nature Reviews Microbiology.

Sequence analysis reveals genetic exchanges and intraspecific spread of SaPI2, a pathogenicity island involved in menstrual toxic shock.

C. Ubeda, J. Penadés, R. Novick, 2007, Microbiology.

A pathogenicity island replicon in Staphylococcus aureus replicates as an unstable plasmid

C. Ubeda, J. Penadés, R. Novick, 2007, Proceedings of the National Academy of Sciences.

An essential role for the baseplate protein Gp45 in phage adsorption to Staphylococcus aureus

C. Wolz, C. Cambillau, T. Stehle, 2016, Scientific Reports.

Staphylococcal phages and pathogenicity islands drive plasmid evolution

C. Ubeda, R. MacLean, J. Penadés, 2021, Nature Communications.

Protein A-Mediated Multicellular Behavior in Staphylococcus aureus

E. Calvo, C. Solano, I. Lasa, 2008, Journal of bacteriology.

Sak and Sak4 recombinases are required for bacteriophage replication in Staphylococcus aureus

A. Marina, J. Penadés, A. Haag, 2017, Nucleic acids research.

Multiple mechanisms for the activation of human platelet aggregation by Staphylococcus aureus: roles for the clumping factors ClfA and ClfB, the serine–aspartate repeat protein SdrE and protein A

D. Fitzgerald, T. Foster, D. Litt, 2002, Molecular microbiology.

I. Lasa, J. Penadés, J. Leiva, 2006, The International journal of artificial organs.

A multihost bacterial pathogen overcomes continuous population bottlenecks to adapt to new host species

J. Penadés, M. Tormo-Más, Rodrigo Bacigalupe, 2019, Science Advances.

Bap, a Biofilm Matrix Protein of Staphylococcus aureus Prevents Cellular Internalization through Binding to GP96 Host Receptor

C. Gil, C. Solano, I. Lasa, 2012, PLoS pathogens.

Non-canonical Staphylococcus aureus pathogenicity island repression

O. Byron, R. Cogdell, A. Marina, 2021, bioRxiv.

The structure of a polygamous repressor reveals how phage-inducible chromosomal islands spread in nature

X. Salvatella, A. Marina, J. Penadés, 2019, Nature Communications.

Convergent evolution involving dimeric and trimeric dUTPases in pathogenicity island mobilization

A. Marina, J. Penadés, M. Tormo-Más, 2017, PLoS pathogens.

A superfamily of transcriptional activators regulates bacteriophage packaging and lysis in Gram-positive bacteria

V. Monedero, I. Lasa, S. Campoy, 2013 .

Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit

R. Cogdell, A. Roszak, A. Marina, 2019, Molecular cell.

Phage-inducible chromosomal islands are ubiquitous within the bacterial universe

J. Penadés, R. Davies, John Chen, 2018, The ISME Journal.

Bacteriophages benefit from generalized transduction

K. Foster, E. Rocha, H. Ingmer, 2019, PLoS pathogens.

Staphylococcal pathogenicity island interference with helper phage reproduction is a paradigm of molecular parasitism

C. Ubeda, J. Penadés, R. Novick, 2012, Proceedings of the National Academy of Sciences.

Calcium Inhibits Bap-Dependent Multicellular Behavior in Staphylococcus aureus

I. Lasa, A. Toledo-Arana, J. Penadés, 2004, Journal of bacteriology.

Killing niche competitors by remote-control bacteriophage induction

I. Lasa, J. Penadés, R. Novick, 2009, Proceedings of the National Academy of Sciences.

Phage-inducible islands in the Gram-positive cocci

M. Martí, Nuria Quiles-Puchalt, J. Penadés, 2017, The ISME Journal.

Rebooting Synthetic Phage-Inducible Chromosomal Islands: One Method to Forge Them All

I. Lasa, J. Penadés, A. Haag, 2020, BioDesign Research.

Relevant Role of Fibronectin-Binding Proteins in Staphylococcus aureus Biofilm-Associated Foreign-Body Infections

C. Solano, I. Lasa, J. Valle, 2009, Infection and Immunity.

Role of Staphylococcal Phage and SaPI Integrase in Intra- and Interspecies SaPI Transfer

C. Ubeda, I. Lasa, J. Penadés, 2007, Journal of bacteriology.

Convergent evolution of pathogenicity islands in helper cos phage interference

A. Marina, T. Dokland, J. Penadés, 2016, Philosophical Transactions of the Royal Society B: Biological Sciences.

Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems

A. Marina, J. Penadés, F. Gallego del Sol, 2019, Molecular cell.

Extracellular proteases inhibit protein-dependent biofilm formation in Staphylococcus aureus.

M. Martí, I. Lasa, J. Penadés, 2010, Microbes and infection.

SaPI mutations affecting replication and transfer and enabling autonomous replication in the absence of helper phage

C. Ubeda, I. Lasa, J. Penadés, 2008, Molecular microbiology.

Immunology / Immunologie Biofilm-associated proteins

C. Solano, I. Lasa, J. Penadés, 2006 .

Staphylococcus aureus nasal carriage in rabbits.

J. Penadés, A. Trocino, L. Selva, 2008 .

Beyond the CRISPR-Cas safeguard: PICI-encoded innate immune systems protect bacteria from bacteriophage predation.

A. Marina, J. Penadés, John Chen, 2020, Current opinion in microbiology.

Pathogenicity island-directed transfer of unlinked chromosomal virulence genes.

Stuart Brown, J. Penadés, R. Novick, 2015, Molecular cell.

Unravelling bacteriophage ϕ11 requirements for packaging and transfer of mobile genetic elements in Staphylococcus aureus

I. Lasa, Nuria Quiles-Puchalt, J. Penadés, 2014, Molecular microbiology.

Control of Staphylococcus aureus pathogenicity island excision

M. Martí, I. Lasa, J. Penadés, 2012, Molecular microbiology.

Structure-function analysis of the SaPIbov1 replication origin in Staphylococcus aureus.

C. Ubeda, J. Penadés, M. Tormo-Más, 2012, Plasmid.

SaPI operon I is required for SaPI packaging and is controlled by LexA

C. Ubeda, I. Lasa, S. Campoy, 2007, Molecular microbiology.

Systematic Reconstruction of the Complete Two-Component Sensorial Network in Staphylococcus aureus

C. Gil, I. Lasa, J. Penadés, 2020, mSystems.

Wall teichoic acids are dispensable for anchoring the PNAG exopolysaccharide to the Staphylococcus aureus cell surface.

G. Pier, I. Lasa, T. Maira-Litrán, 2008, Microbiology.

Characterization and Expression of Multiple Alternatively Spliced Transcripts of the Goodpasture Antigen Gene Region

F. Revert, J. Penadés, J. Saus, 1995 .

Characterization and expression of multiple alternatively spliced transcripts of the Goodpasture antigen gene region. Goodpasture antibodies recognize recombinant proteins representing the autoantigen and one of its alternative forms.

F. Revert, J. Penadés, J. Saus, 1995, European journal of biochemistry.

Lysogenization of Staphylococcus aureus RN450 by phages ϕ11 and ϕ80α leads to the activation of the SigB regulon

Nuria Quiles-Puchalt, J. Penadés, P. García, 2018, Scientific Reports.

Staphylococcus aureus Develops an Alternative, ica-Independent Biofilm in the Absence of the arlRS Two-Component System

M. Débarbouillé, I. Lasa, A. Toledo-Arana, 2005, Journal of bacteriology.

BapA, a large secreted protein required for biofilm formation and host colonization of Salmonella enterica serovar Enteritidis

I. Lasa, C. Gamazo, J. Ghigo, 2005, Molecular Microbiology.

Bap, a Staphylococcus aureus Surface Protein Involved in Biofilm Formation

C. Solano, I. Lasa, J. Valle, 2001, Journal of bacteriology.

Role of Biofilm-Associated Protein Bap in the Pathogenesis of Bovine Staphylococcus aureus

C. Ubeda, I. Lasa, J. Penadés, 2004, Infection and Immunity.

SarA Is an Essential Positive Regulator of Staphylococcus epidermidis Biofilm Development

M. Martí, I. Lasa, J. Valle, 2005, Journal of bacteriology.

The Enterococcal Surface Protein, Esp, Is Involved in Enterococcus faecalis Biofilm Formation

C. Solano, I. Lasa, J. Valle, 2001, Applied and Environmental Microbiology.

An rpsL-based allelic exchange vector for Staphylococcus aureus.

J. Penadés, R. Novick, John W. Chen, 2015, Plasmid.

β-Lactam Antibiotics Induce the SOS Response and Horizontal Transfer of Virulence Factors in Staphylococcus aureus

Susana Campoy, Richard P. Novick, C. Ubeda, 2006, Journal of bacteriology.

Development of CRISPR-Cas13a-based antimicrobials capable of sequence-specific killing of target bacteria

L. Cui, J. Penadés, Masato Suzuki, 2019, Nature Communications.

RinA controls phage-mediated packaging and transfer of virulence genes in Gram-positive bacteria

I. Lasa, S. Campoy, J. Barbé, 2011, Nucleic acids research.

Genome-wide antisense transcription drives mRNA processing in bacteria

T. Gingeras, A. Dobin, C. Solano, 2011, Proceedings of the National Academy of Sciences.

Staphylococcal pathogenicity island DNA packaging system involving cos-site packaging and phage-encoded HNH endonucleases

A. Marina, J. Alonso, Nuria Quiles-Puchalt, 2014, Proceedings of the National Academy of Sciences.

Inhibiting the two-component system GraXRS with verteporfin to combat Staphylococcus aureus infections

C. Gil, I. Lasa, J. Penadés, 2020, Scientific Reports.

System Two-Component arlRS Absence of the Independent Biofilm in the ica- Alternative, Develops an Staphylococcus aureus

I. Lasa, A. Toledo-Arana, J. Penadés, 2013 .

Staphylococcal Bap Proteins Build Amyloid Scaffold Biofilm Matrices in Response to Environmental Signals

S. Ventura, I. Lasa, J. Valle, 2016, PLoS pathogens.

Antibiotic‐induced SOS response promotes horizontal dissemination of pathogenicity island‐encoded virulence factors in staphylococci

C. Ubeda, I. Lasa, J. Penadés, 2005, Molecular microbiology.

Sensory deprivation in Staphylococcus aureus

M. Martí, C. Solano, I. Lasa, 2018, Nature Communications.

Staphylococcus aureus in Animals

J. Penadés, A. Haag, J. Fitzgerald, 2019, Microbiology spectrum.

Protection from Staphylococcus aureus mastitis associated with poly-N-acetyl beta-1,6 glucosamine specific antibody production using biofilm-embedded bacteria.

G. Pier, C. Solano, I. Lasa, 2009, Vaccine.

Genetic transduction by phages and chromosomal islands: The new and noncanonical

J. Penadés, Yin Ning Chiang, John Chen, 2019, PLoS pathogens.

Genome hypermobility by lateral transduction

Nuria Quiles-Puchalt, J. Penadés, Rodrigo Bacigalupe, 2018, Science.

Bacterial viruses enable their host to acquire antibiotic resistance genes from neighbouring cells

H. Ingmer, J. Penadés, H. Westh, 2016, Nature Communications.

A single natural nucleotide mutation alters bacterial pathogen host-tropism

S. Foster, M. Ward, J. Penadés, 2015, Nature Genetics.

Adaptation of Staphylococcus aureus to ruminant and equine hosts involves SaPI‐carried variants of von Willebrand factor‐binding protein

I. Lasa, J. Penadés, M. Tormo-Más, 2010, Molecular microbiology.

Phage-inducible chromosomal islands are ubiquitous within the bacterial universe

J. Penadés, R. Davies, John Chen, 2018, The ISME Journal.

σB Regulates IS256-Mediated Staphylococcus aureus Biofilm Phenotypic Variation

I. Lasa, J. Valle, J. Penadés, 2007, Journal of bacteriology.

Bap: a family of surface proteins involved in biofilm formation.

I. Lasa, J. Penadés, Í. Lasa, 2006, Research in microbiology.

The arbitrium system controls prophage induction

A. Marina, W. Meijer, Nuria Quiles-Puchalt, 2021, Current Biology.

Molecular Basis of Lysis-Lysogeny Decisions in Gram-Positive Phages.

A. Marina, Nuria Quiles-Puchalt, J. Penadés, 2021, Annual review of microbiology.

Virus Satellites Drive Viral Evolution and Ecology

S. Elena, A. Buckling, A. Marina, 2015, PLoS genetics.

Intra- and inter-generic transfer of pathogenicity island-encoded virulence genes by cos phages

Nuria Quiles-Puchalt, J. Penadés, R. Novick, 2014, The ISME Journal.

Pirating conserved phage mechanisms promotes promiscuous staphylococcal pathogenicity island transfer

A. Marina, J. Penadés, E. Maiques, 2017, eLife.

Another look at the mechanism involving trimeric dUTPases in Staphylococcus aureus pathogenicity island induction involves novel players in the party

A. Marina, Nuria Quiles-Puchalt, J. Penadés, 2016, Nucleic acids research.

Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism.

A. Marina, J. Penadés, M. Tormo-Más, 2013, Molecular cell.

Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81A D110C S168C mutant with dUpNHpp).

A. Marina, J. Penadés, M. Tormo-Más, 2013 .

A super-family of transcriptional activators regulates bacteriophage packaging and lysis in Gram-positive bacteria

V. Monedero, I. Lasa, S. Campoy, 2013, Nucleic acids research.

SarA and not σB is essential for biofilm development by Staphylococcus aureus

I. Lasa, J. Valle, J. Ghigo, 2003, Molecular microbiology.

Clp-dependent proteolysis of the LexA N-terminal domain in Staphylococcus aureus.

H. Ingmer, J. Penadés, D. Frees, 2011, Microbiology.

Sensory deprivation in Staphylococcus aureus

M. Martí, C. Solano, I. Lasa, 2018, Nature Communications.

A novel ejection protein from bacteriophage 80α that promotes lytic growth.

T. Dokland, Nuria Quiles-Puchalt, J. Penadés, 2018, Virology.

Genotypic characterization of Staphylococcus aureus strains isolated from rabbit lesions.

J. Penadés, L. Selva, J. M. Corpa, 2007, Veterinary microbiology.

Plays a Structural Role in the Viral Particle 11 ϕ Staphylococcus aureus Bacteriophage The Peptidoglycan Hydrolase of

Lorena Rodríguez-Rubio, Nuria Quiles-Puchalt, J. Penadés, 2013 .

Staphylococcal infections in rabbit does on two industrial farms

J. Penadés, L. Selva, B. Peris, 2007, Veterinary Record.

COLABORACIÓN ESPECIAL Biofilms bacterianos e infección Bacterial biofilms and infection

I. Lasa, J. Penadés, J. Leiva, 2005 .

Staphylococcus aureus in Animals

J. Penadés, J. Fitzgerald, A. Haag, 2019, Gram-Positive Pathogens.

Bap-dependent biofilm formation by pathogenic species of Staphylococcus: evidence of horizontal gene transfer?

I. Lasa, J. Penadés, F. Götz, 2005, Microbiology.

Expression of the Biofilm-Associated Protein Interferes with Host Protein Receptors of Staphylococcus aureus and Alters the Infective Process

I. Lasa, T. Foster, J. Penadés, 2002, Infection and Immunity.

dUTPases, the unexplored family of signalling molecules.

A. Marina, J. Penadés, M. Tormo-Más, 2013, Current opinion in microbiology.

A regulatory cascade controls Staphylococcus aureus pathogenicity island activation

A. Marina, J. Penadés, R. Novick, 2021, Nature Microbiology.

Transferin Intra- and Interspecies SaPI Role of Staphylococcal Phage and SaPI

C. Ubeda, I. Lasa, J. Penadés, 2013 .

aureus Staphylococcus Virulence Factors in Response and Horizontal Transfer of -Lactam Antibiotics Induce the SOS β

C. Ubeda, I. Lasa, S. Campoy, 2013 .

Role of staphylococcal phage and SaPI integrase in intra-and 1 interspecies SaPI transfer 2 3

C. Ubeda, I. Lasa, J. Penadés, 2007 .

Biofilm-associated proteins.

C. Solano, I. Lasa, J. Penadés, 2006, Comptes rendus biologies.

Staphylococcus aureus in animals 1

J. Penadés, J. Fitzgerald, A. Haag, 2020 .

The role of horizontal gene transfer in Staphylococcus aureus host adaptation

J. Penadés, J. Fitzgerald, C. Guinane, 2011, Virulence.

Staphylococci of Animals

J. Penadés, J. Fitzgerald, 2008 .

Hydrophobicity of ruminant mastitisStaphylococcus aureus in relation to bacterial aging and slime production

J. Penadés, Rafael Baselga, Iñaki Albizu, 1992, Current Microbiology.

Biotechnological War against Biofilms. Could Phages Mean the End of Device-Related Infections?

I. Lasa, J. Penadés, J. Leiva, 2007, The International journal of artificial organs.

SarA Positively Controls Bap-Dependent Biofilm Formation in Staphylococcus aureus

I. Lasa, J. Penadés, A. Manna, 2005, Journal of bacteriology.

aureus Staphylococcus Biofilm Formation in SarA Positively Controls Bap-Dependent

I. Lasa, J. Penadés, A. Manna, 2013 .

Biofilms bacterianos e infección

I. Lasa, J. Penadés, J. Leiva, 2005 .

Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80α dUTPase

A. Marina, J. Penadés, E. Maiques, 2017, Scientific Reports.

Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems

A. Marina, J. Penadés, F. Gallego del Sol, 2019, Molecular cell.

Radical genome remodelling accompanied the emergence of a novel host-restricted bacterial pathogen

J. Penadés, A. Haag, S. Granneman, 2021, PLoS pathogens.

Protection from Staphylococcus aureus mastitis associated with poly-N-acetyl beta-1,6 glucosamine specific antibody production using biofilm-embedded bacteria.

G. Pier, C. Solano, I. Lasa, 2009, Vaccine.

Massive genome decay and insertion sequence expansion drive the evolution of a novel host-restricted bacterial pathogen

J. Penadés, A. Haag, S. Granneman, 2020 .

Genome hypermobility by lateral transduction

Nuria Quiles-Puchalt, J. Penadés, Rodrigo Bacigalupe, 2018, Science.

Control of Staphylococcus aureus pathogenicity island excision

M. Martí, I. Lasa, J. Penadés, 2012, Molecular microbiology.

Staphylococcus aureus Develops an Alternative, ica-Independent Biofilm in the Absence of the arlRS Two-Component System

M. Débarbouillé, J. Penadés, N. Merino, 2005, Journal of bacteriology.

Phase-variable expression of the biofilm-associated protein (Bap) in Staphylococcus aureus.

C. Ubeda, M. Martí, J. Penadés, 2007, Microbiology.

Phosphorylation of the Goodpasture Antigen by Type A Protein Kinases (*)

M. Plana, F. Revert, J. Penadés, 1995, The Journal of Biological Chemistry.

System Two-Component arlRS Absence of the Independent Biofilm in the ica- Alternative, Develops an Staphylococcus aureus

J. Penadés, N. Merino, Alejandro Toledo-Arana, 2013 .

Inaugural article: a pathogenicity island replicon in Staphylococcus aureus replicates as an unstable plasmid

C. Ubeda, J. Penadés, R. Novick, 2007 .