J. MacKay

发表

Expression of the β-glucosidase gene Pgβglu-1 underpins natural resistance of white spruce against spruce budworm

J. Bohlmann, Melissa H. Mageroy, G. Parent, 2014, The Plant journal : for cell and molecular biology.

Evaluation of the impact of single nucleotide polymorphisms and primer mismatches on quantitative PCR

J. MacKay, B. Boyle, N. Dallaire, 2009, BMC biotechnology.

The Norway spruce genome sequence and conifer genome evolution

Douglas G. Scofield, M. Koriabine, B. Sundberg, 2013, Nature.

Insights into Conifer Giga-Genomes1

Steven J. M. Jones, I. Birol, O. Nilsson, 2014, Plant Physiology.

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.

Steven J. M. Jones, Shaun D. Jackman, Benjamin P. Vandervalk, 2015, The Plant journal : for cell and molecular biology.

RECENT ADVANCES IN UNDERSTANDING LIGNIN BIOSYNTHESIS.

R. Sederoff, R. Whetten, J. MacKay, 1998, Annual review of plant physiology and plant molecular biology.

Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters

James E. Johnson, M. Marra, A. Siddiqui, 2005, BMC Genomics.

Automated SNP detection from a large collection of white spruce expressed sequences: contributing factors and approaches for the categorization of SNPs

J. MacKay, J. Bousquet, N. Pavy, 2006, BMC Genomics.

Forest Tree Genomics: Review of Progress

G. Parent, J. MacKay, J. Sena, 2015 .

Effects of increased nitrogen supply on the lignification of poplar wood.

C. Lapierre, F. Pitre, B. Pollet, 2007, Journal of agricultural and food chemistry.

Diverse developmental mutants revealed in an activation-tagged population of poplar

S. Regan, W. Bosnich, A. Séguin, 2007 .

Short-term effects of nitrogen availability on wood formation and fibre properties in hybrid poplar

F. Pitre, J. MacKay, J. Cooke, 2007, Trees.

Multiple Metabolic Innovations and Losses Are Associated with Major Transitions in Land Plant Evolution

S. Kelly, L. Sweetlove, L. Dolan, 2020, Current Biology.

The Landscape of Nucleotide Polymorphism among 13,500 Genes of the Conifer Picea glauca, Relationships with Functions, and Comparison with Medicago truncatula

J. MacKay, J. Beaulieu, J. Bousquet, 2013, Genome biology and evolution.

A White Spruce Gene Catalog for Conifer Genome Analyses1[W][OA]

P. Rigault, P. Lepage, J. Cooke, 2011, Plant Physiology.

Potential link between biotic defense activation and recalcitrance to induction of somatic embryogenesis in shoot primordia from adult trees of white spruce (Picea glauca)

R. Rutledge, D. Stewart, K. Klimaszewska, 2013, BMC Plant Biology.

Are long-lived trees poised for evolutionary change? Single locus effects in the evolution of gene expression networks in spruce.

C. Landry, J. MacKay, Jukka-Pekka Verta, 2013, Molecular ecology.

Evolution of the biosynthesis of two hydroxyacetophenones in plants.

J. Bohlmann, Melissa H. Mageroy, G. Parent, 2018, Plant, cell & environment.

PULPING AND BLEACHING OF CAD-DEFICIENT WOOD

R. Sederoff, J. MacKay, D. Dimmel, 2001 .

Modified Lignin and Delignification with a CAD-Deficient Loblolly Pine

R. Sederoff, H. Jameel, J. MacKay, 1999 .

Pulping, bleaching, and characterization of CAD-deficient wood

J. MacKay, D. Dimmel, E. Althen, 1999 .

Average effect of a mutation in lignin biosynthesis in loblolly pine

J. MacKay, S. McKeand, D. Remington, 1999, Theoretical and Applied Genetics.

Title: A white spruce gene catalogue for conifer genome analyses.

P. Rigault, P. Lepage, J. Cooke, 2011 .

In vivo function of Pgßglu-1 in the release of acetophenones in white spruce

J. Bohlmann, A. Séguin, D. Lachance, 2017 .

In vivo function of Pgβglu-1 in the release of acetophenones in white spruce

J. Bohlmann, A. Séguin, D. Lachance, 2017, PeerJ.

Molecular characterization of EgMYB1, a putative transcriptional repressor of the lignin biosynthetic pathway

J. Grima-Pettenati, A. Séguin, J. MacKay, 2007 .

Development of a Traceability System Based on a SNP Array for Large-Scale Production of High-Value White Spruce (Picea glauca)

J. MacKay, A. Rainville, J. Bousquet, 2017, Front. Plant Sci..

Reference transcriptomes and comparative analyses of six species in the threatened rosewood genus Dalbergia

J. MacKay, D. Boshier, T. So, 2020, Scientific Reports.

Identification of nitrogen responsive genes in poplar roots grown under two contrasting nitrogen levels

M. Ouellet, F. Pitre, J. MacKay, 2014 .

Genetic analysis of cinnamyl alcohol dehydrogenase in loblolly pine: single gene inheritance, molecular characterization and evolution

R. Sederoff, R. Whetten, J. MacKay, 1995, Molecular and General Genetics MGG.

Comparative transcriptomic responses of European and Japanese larches to infection by Phytophthora ramorum

J. MacKay, S. Green, Tin Hang Hung, 2022, BMC Plant Biology.

Title: Gene copy number variations in adaptive evolution: the genomic distribution of gene CNVs revealed by genetic mapping and their adaptive role in an undomesticated species,

J. MacKay, N. Isabel, J. Prunier, 2020 .

The theory and applications of CRISPR in plant and tree improvement.

J. MacKay, J. Parsons, 2018 .

Hydroxyacetophenone defenses in white spruce against spruce budworm

J. Bohlmann, G. Parent, Isabelle Giguére, 2019, Evolutionary applications.

Expansion of the dehydrin gene family in the Pinaceae is associated with considerable structural diversity and drought-responsive expression

P. Rigault, Isabelle Giguére, J. MacKay, 2018, Tree physiology.

Inheritance, gene expression, and lignin characterization in a mutant pine deficient in cinnamyl alcohol dehydrogenase.

R. Sederoff, R. Whetten, M. Campbell, 1997, Proceedings of the National Academy of Sciences of the United States of America.

Abnormal lignin in a loblolly pine mutant.

R. Sederoff, J. Ralph, R. Whetten, 1997, Science.

Genes involved in the biosynthesis of lignin precursors in Arabidopsis thaliana

L. Jouanin, J. MacKay, A. Eudes, 2003 .

Transcriptome profiling in conifers and the PiceaGenExpress database show patterns of diversification within gene families and interspecific conservation in vascular gene expression

J. Bohlmann, P. Rigault, Isabelle Giguére, 2012, BMC Genomics.

Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR.

M Pean, R. Sederoff, W. Boerjan, 2001, Phytochemistry.

Expression profiling and functional analysis of Populus WRKY23 reveals a regulatory role in defense.

I. Major, A. Séguin, V. Levée, 2009, The New phytologist.

EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar.

J. Grima-Pettenati, C. Lapierre, A. Séguin, 2010, The New phytologist.

Unexpected variation in lignin.

R. Sederoff, J. Ralph, R. Hatfield, 1999, Current opinion in plant biology.

Association Genetics of Wood Physical Traits in the Conifer White Spruce and Relationships With Gene Expression

P. Rigault, J. MacKay, J. Beaulieu, 2011, Genetics.

Spontaneous mutations and transmission distortions of genic copy number variants shape the standing genetic variation in Picea glauca

Isabelle Giguére, J. MacKay, J. Bousquet, 2017, bioRxiv.

Large-scale screening of transcription factor–promoter interactions in spruce reveals a transcriptional network involved in vascular development

A. Séguin, D. Lachance, Isabelle Giguére, 2014, Journal of experimental botany.

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data

Inanç Birol, Steven J. M. Jones, Shaun D. Jackman, 2013, Bioinform..

Development of high‐density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

P. Rigault, F. Gagnon, J. Cooke, 2013, Molecular ecology resources.

Genetic control of somatic embryogenesis initiation in loblolly pine and implications for breeding

J. MacKay, G. Pullman, M. Becwar, 2006, Tree Genetics & Genomes.

Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size

Steven J. M. Jones, I. Birol, C. Ritland, 2014, BMC Plant Biology.

The Genetic Landscape of Transcriptional Networks in a Combined Haploid/Diploid Plant System

C. Landry, J. MacKay, Jukka-Pekka Verta, 2014, bioRxiv.

Sequence analysis and functional characterization of the promoter of the Picea glauca Cinnamyl Alcohol Dehydrogenase gene in transgenic white spruce plants

J. Grima-Pettenati, A. Séguin, J. MacKay, 2009 .

Special symposium: In vitro plant recalcitrance transcript profiling: A tool to assess the development of conifer embryos

J. Cairney, J. MacKay, N. Xu, 2000, In Vitro Cellular & Developmental Biology - Plant.

Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca)

J. Grima-Pettenati, J. MacKay, F. Bedon, 2007, BMC Plant Biology.

Genetics of somatic embryogenesis in loblolly pine

J. MacKay, G. Pullman, C. Perfetti, 2001 .

Stranger in a strange land: genetic variation of native insect resistance biomarkers in UK Sitka spruce (Picea sitchensis [Bong.] Carr.)

J. Woolliams, J. Cottrell, J. MacKay, 2021, Forestry: An International Journal of Forest Research.

Genetic diversity in Canadian Hardwoods: Implications for conservation

J. MacKay, J. Bousquet, Peng Li, 1992 .

Identification of conserved core xylem gene sets: conifer cDNA microarray development, transcript profiling and computational analyses.

Isabelle Giguére, J. MacKay, B. Boyle, 2008, The New phytologist.

Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees

M. Ouellet, A. Séguin, J. Cooke, 2010, BMC Plant Biology.

Gene copy number variations involved in balsam poplar (Populus balsamifera L.) adaptive variations

R. Guy, Isabelle Giguére, J. MacKay, 2018, Molecular ecology.

Gene copy number variations in adaptive evolution: The genomic distribution of gene copy number variations revealed by genetic mapping and their adaptive role in an undomesticated species, white spruce (Picea glauca)

J. MacKay, J. Bousquet, N. Isabel, 2017, Molecular ecology.

Conifer genomics and adaptation: at the crossroads of genetic diversity and genome function.

J. MacKay, J. Prunier, Jukka-Pekka Verta, 2016, The New phytologist.

Identification and characterization of bacterial strains associated with diseased oak trees in Northern Iran

J. MacKay, M. Shams-bakhsh, H. Rahimian, 2020 .

A high‐resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: structural genomics implications and correspondence with physical distance

I. Birol, J. Bohlmann, F. Gagnon, 2017, The Plant journal : for cell and molecular biology.

The large repertoire of conifer NLR resistance genes includes drought responsive and highly diversified RNLs

A. Deslauriers, P. Rigault, G. Parent, 2019, Scientific Reports.

Molecular Evolution of Regulatory Genes in Spruces from Different Species and Continents: Heterogeneous Patterns of Linkage Disequilibrium and Selection but Correlated Recent Demographic Changes

J. MacKay, J. Bousquet, N. Isabel, 2010, Journal of Molecular Evolution.

Association genetics of acetophenone defence against spruce budworm in mature white spruce

G. Parent, Isabelle Giguére, J. MacKay, 2018, BMC Plant Biology.

NMR analysis of lignins in CAD-deficient plants. Part 1. Incorporation of hydroxycinnamaldehydes and hydroxybenzaldehydes into lignins.

John Ralph, Takashi Ito, John J MacKay, 2003, Organic & biomolecular chemistry.

Lignin structure in a mutant pine deficient in cinnamyl alcohol dehydrogenase.

R. Sederoff, C. Lapierre, B. Pollet, 2000, Journal of agricultural and food chemistry.

CNVs into the wild: screening the genomes of conifer trees (Picea spp.) reveals fewer gene copy number variations in hybrids and links to adaptation

J. MacKay, J. Prunier, S. Caron, 2017, BMC Genomics.

Connecting tree‐ring phenotypes, genetic associations and transcriptomics to decipher the genomic architecture of drought adaptation in a widespread conifer

M. Girardin, G. Parent, J. MacKay, 2021, Molecular ecology.

From genotypes to phenotypes: expression levels of genes encompassing adaptive SNPs in black spruce

J. MacKay, J. Bousquet, J. Prunier, 2015, Plant Cell Reports.

High nitrogen fertilization and stem leaning have overlapping effects on wood formation in poplar but invoke largely distinct molecular pathways.

Nicholas J. P. Wiebe, M. Ouellet, G. Mouille, 2010, Tree physiology.

PULPING AND BLEACHING OF PARTIALLY CAD-DEFICIENT WOOD

J. MacKay, S. McKeand, D. O'malley, 2002 .

Range-wide differential adaptation and genomic vulnerability in critically endangered Asian rosewoods

I. Theilade, J. MacKay, H. Gaisberger, 2023, bioRxiv.

Dissection of expression-quantitative trait locus and allele specificity using a haploid/diploid plant system - insights into compensatory evolution of transcriptional regulation within populations.

C. Landry, J. MacKay, Jukka-Pekka Verta, 2016, The New phytologist.

Differential gene expression patterns in white spruce newly formed tissue on board the International Space Station

Isabelle Giguére, J. MacKay, J. Beaulieu, 2013 .

Subgroup 4 R2R3-MYBs in conifer trees: gene family expansion and contribution to the isoprenoid- and flavonoid-oriented responses

J. Gershenzon, J. Grima-Pettenati, S. Mansfield, 2010, Journal of experimental botany.

HORMONE-INDUCED SIGNALING DURING MOSS DEVELOPMENT

R. Sederoff, R. Whetten, J. MacKay, 2008 .

Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis

J. Grima-Pettenati, S. Mansfield, A. Séguin, 2008, Journal of experimental botany.

Functional Analysis of the PgCesA3 White Spruce Cellulose Synthase Gene Promoter in Secondary Xylem

D. Stewart, A. Séguin, D. Lachance, 2019, Front. Plant Sci..

Opposite action of R2R3-MYBs from different subgroups on key genes of the shikimate and monolignol pathways in spruce

D. Stewart, A. Séguin, Isabelle Giguére, 2013, Journal of experimental botany.

SABATH methyltransferases from white spruce (Picea glauca): gene cloning, functional characterization and structural analysis.

F. Chen, J. Ferrer, Nan Zhao, 2009, Tree physiology.

Gene expression during formation of earlywood and latewood in loblolly pine: expression profiles of 350 genes.

R. Sederoff, M. Kirst, R. Whetten, 2004, Plant biology.

CNVs into the wild: screening the genomes of conifer trees (Picea spp.) reveals fewer gene copy number variations in hybrids and links to adaptation

J. MacKay, J. Prunier, S. Caron, 2017, BMC Genomics.

Modular organization of the white spruce (Picea glauca) transcriptome reveals functional organization and evolutionary signatures

Isabelle Giguére, J. MacKay, M. Lamara, 2015, The New phytologist.

Association genetics of acetophenone defence against spruce budworm in mature white spruce

G. Parent, Isabelle Giguére, J. MacKay, 2018, BMC Plant Biology.

ForestTreeDB: a database dedicated to the mining of tree transcriptomes

James J. Johnson, John A. Crow, Timothy M. Kunau, 2006, Nucleic Acids Res..

Genetic control and evolutionary potential of a constitutive resistance mechanism against the spruce budworm (Choristoneura fumiferana) in white spruce (Picea glauca)

G. Parent, É. Bauce, J. MacKay, 2018, Heredity.

A Conifer UDP-Sugar Dependent Glycosyltransferase Contributes to Acetophenone Metabolism and Defense against Insects1[OPEN]

S. Withers, J. Bohlmann, B. Schneider, 2017, Plant Physiology.

Insect herbivory (Choristoneura fumiferana, Tortricidea) underlies tree population structure (Picea glauca, Pinaceae)

G. Parent, Gaby Germanos, Isabelle Giguére, 2017, Scientific Reports.

Haploid transcriptome analysis reveals allelelic gene expression variants, co-expressed gene groups, and linkages between expression and copy number variation

C. Landry, Isabelle Giguére, J. MacKay, 2011, BMC Proceedings.

Heterologous Array Analysis in Pinaceae: Hybridization of Pinus Taeda cDNA Arrays With cDNA From Needles and Embryogenic Cultures of P. Taeda, P. Sylvestris or Picea Abies

R. Sederoff, P. Bozhkov, J. MacKay, 2002, Comparative and functional genomics.

High-density genetic linkage mapping in Sitka spruce advances the integration of genomic resources in conifers

J. Woolliams, J. Cottrell, J. MacKay, 2023, bioRxiv.

Spruce giga-genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes.

Richard A. Moore, I. Birol, Yongjun Zhao, 2022, The Plant journal : for cell and molecular biology.

Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size

I. Birol, C. Ritland, K. Ritland, 2014, BMC Plant Biology.

From genotypes to phenotypes: expression levels of genes encompassing adaptive SNPs in black spruce

J. MacKay, J. Bousquet, J. Prunier, 2015, Plant Cell Reports.

Gene mapping in white spruce (P. glauca): QTL and association studies integrating population and expression data

P. Rigault, J. Cooke, J. MacKay, 2011, BMC Proceedings.

Long-insert sequence capture detects high copy numbers in a defence-related beta-glucosidase gene βglu-1 with large variations in white spruce but not Norway spruce

I. Birol, N. Erbilgin, J. MacKay, 2023, bioRxiv.

Range-wide differential adaptation and genomic offset in critically endangered Asian rosewoods

I. Theilade, J. MacKay, H. Gaisberger, 2023, Proceedings of the National Academy of Sciences of the United States of America.

Physiological responses of rosewoods Dalbergia cochinchinensis and D. oliveri under drought and heat stresses

J. MacKay, R. Jalonen, D. Boshier, 2020, Ecology and evolution.

EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar.

J. Grima-Pettenati, C. Lapierre, A. Séguin, 2010, The New phytologist.

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.

Benjamin P. Vandervalk, I. Birol, Gordon Robertson, 2015, The Plant journal : for cell and molecular biology.