Haiping Zhang

发表

Deep Learning Based Drug Screening for Novel Coronavirus 2019-nCov

Yanjie Wei, Yang Yang, Konda Mani Saravanan, 2020, Interdisciplinary Sciences: Computational Life Sciences.

Evaluation of residue-residue contact prediction methods: From retrospective to prospective

Konda Mani Saravanan, Yanjie Wei, Wenhui Xi, 2021, PLoS computational biology.

Investigating the stability of dengue virus envelope protein dimer using well‐tempered metadynamics simulations

Lanyuan Lu, Haiping Zhang, Eri Kai, 2019, Proteins.

Validation of Deep Learning-Based DFCNN in Extremely Large-Scale Virtual Screening and Application in Trypsin I Protease Inhibitor Discovery

Yanjie Wei, Xuli Wu, Haiping Zhang, 2022, Frontiers in Molecular Biosciences.

Generating and screening de novo compounds against given targets using ultrafast deep learning models as core components

Konda Mani Saravanan, Yanjie Wei, Haiping Zhang, 2022, Briefings Bioinform..

Inter-Residue Distance Prediction From Duet Deep Learning Models

Wenhui Xi, Haiping Zhang, Zhendong Bei, 2022, Frontiers in Genetics.

Network Understanding of Herb Medicine via Rapid Identification of Ingredient-Target Interactions

Hao Wang, Zhi-Liang Ji, Jian-Bo Pan, 2014, Scientific Reports.

FDA-approved Pralatrexate identified by virtual drug screening inhibits SARS-CoV-2 replication in vitro

Konda Mani Saravanan, Yanjie Wei, Haiping Zhang, 2020 .

An Efficient Modern Strategy to Screen Drug Candidates Targeting RdRp of SARS-CoV-2 With Potentially High Selectivity and Specificity

Konda Mani Saravanan, Yanjie Wei, Haiping Zhang, 2022, Frontiers in Chemistry.

DeepBindBC: a practical deep learning method for identifying native-like protein-ligand complexes in virtual screening.

Konda Mani Saravanan, Yanjie Wei, Xuli Wu, 2022, Methods.

Deep-learning based bioactive therapeutic peptides generation and screening

Yanjie Wei, Xuli Wu, Haiping Zhang, 2022, bioRxiv.

Structural basis for the inhibition of SARS-CoV2 main protease by Indian medicinal plant-derived antiviral compounds

Konda Mani Saravanan, Yanjie Wei, H. Shakila, 2020, Journal of biomolecular structure & dynamics.

Large-Scale Target Identification of Herbal Medicine Using a Reverse Docking Approach

Yanjie Wei, Zhiliang Ji, Hai-Ping Zhang, 2019, ACS omega.

A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro

Konda Mani Saravanan, Yanjie Wei, Md Tofazzal Hossain, 2020, PLoS Comput. Biol..

FDA-approved Pralatrexate and Azithromycin identified by virtual drug screening inhibit SARS-CoV-2 replication in vitro

Konda Mani Saravanan, Yanjie Wei, Haiping Zhang, 2020 .

On the Conformational Dynamics of β-Amyloid Forming Peptides: A Computational Perspective

Konda Mani Saravanan, Yanjie Wei, Wenhui Xi, 2020, Frontiers in Bioengineering and Biotechnology.

Deep Learning-Based Drug Screening for COVID-19 and Case Studies

Md. Selim Reza, Konda Mani Saravanan, Yanjie Wei, 2021 .

Natural Potent NAAA Inhibitor Atractylodin Counteracts LPS-Induced Microglial Activation

Jie Ren, Zhaokai Wang, Fan Hu, 2020, Frontiers in Pharmacology.

DeepBindGCN: Integrating Molecular Vector Representation with Graph Convolutional Neural Networks for Accurate Protein-Ligand Interaction Prediction

Haiping Zhang, K. Saravanan, John Z. H. Zhang, 2023, bioRxiv.

IVS2vec: A tool of Inverse Virtual Screening based on word2vec and deep learning techniques.

Hao Wang, Haiping Zhang, Yuhui Hu, 2019, Methods.

DeepBindRG: a deep learning based method for estimating effective protein–ligand affinity

Yanjie Wei, Peng Yin, Haiping Zhang, 2019, PeerJ.

DeepBindPoc: a deep learning method to rank ligand binding pockets using molecular vector representation

Haiping Zhang, Jinzhi Lin, Jiaxiu Zhou, 2020, PeerJ.

An Integrated Deep Learning and Molecular Dynamics Simulation-Based Screening Pipeline Identifies Inhibitors of a New Cancer Drug Target TIPE2

Yanjie Wei, Haiping Zhang, Junxin Li, 2021, Frontiers in Pharmacology.

DeepBindGCN: Integrating Molecular Vector Representation with Graph Convolutional Neural Networks for Protein–Ligand Interaction Prediction

Haiping Zhang, K. Saravanan, John Z. H. Zhang, 2023, Molecules.

Deep-learning based bioactive peptides generation and screening against Xanthine oxidase

Xuli Wu, Haiping Zhang, K. Saravanan, 2023, bioRxiv.

Identifying Native and Non-native Membrane Protein Loops by Using Stabilizing Energetic Terms of Three Popular Force Fields

Haiping Zhang, Konda Mani Saravanan, Yanjie Wei, 2020, Current Chinese Science.