A. Parmeggiani

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Properties of the catalytic domain of CDC25, a Saccharomyces cerevisiae GDP/GTP exchange factor: comparison of its activity on full-length and C-terminal truncated RAS2 proteins.

E. Martegani, M. Parrini, E. Jacquet, 1994, Biochemical and biophysical research communications.

Modeling cytoskeletal traffic: an interplay between passive diffusion and active transport.

N. Kern, I. Neri, A. Parmeggiani, 2012, Physical review letters.

A conserved mechanism drives partition complex assembly on bacterial chromosomes and plasmids

A. Parmeggiani, J. Rech, J. Bouet, 2018, Molecular systems biology.

Robust and conserved stochastic self-assembly mechanism for dynamic ParB-parS partition complexes on bacterial chromosomes and plasmids

A. Parmeggiani, J. Rech, J. Bouet, 2018, bioRxiv.

Phase coexistence in driven one-dimensional transport.

Erwin Frey, A. Parmeggiani, T. Franosch, 2003, Physical review letters.

Totally asymmetric simple exclusion process with Langmuir kinetics.

Erwin Frey, A. Parmeggiani, T. Franosch, 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.

Exclusion processes on networks as models for cytoskeletal transport

N. Kern, I. Neri, A. Parmeggiani, 2013, 1304.1943.

Stepping and crowding of molecular motors: statistical kinetics from an exclusion process perspective.

M. Romano, A. Parmeggiani, L. Ciandrini, 2013, Biophysical journal.

Relevance of histidine‐84 in the elongation factor Tu GTPase activity and in poly(Phe) synthesis: Its substitution by glutamine and alanine

A. Parmeggiani, V. Bocchini, G. Scarano, 1995, FEBS letters.

Detachment of molecular motors under tangential loading

L. Peliti, J. Prost, F. Julicher, 2001, cond-mat/0109187.

Yeast mutants temperature‐sensitive for growth after random mutagenesis of the chromosomal RAS2 gene and deletion of the RAS1 gene.

E. De Vendittis, A. Parmeggiani, A. Vitelli, 1988, The EMBO journal.

RAS residues that are distant from the GDP binding site play a critical role in dissociation factor‐stimulated release of GDP.

G. Seidita, E. De Vendittis, M. Mirisola, 1992, The EMBO journal.

Mutations of Ha‐ras p21 that define important regions for the molecular mechanism of the SDC25 C‐domain, a guanine nucleotide dissociation stimulator.

I. Schlichting, A. Wittinghofer, P. Poullet, 1992, The EMBO journal.

Renewal processes and fluctuation analysis of molecular motor stepping

Jaime E. Santos, Erwin Frey, A. Parmeggiani, 2005, Physical biology.

REGULATION OF PHOSPHOFRUCTOKINASE ACTIVITY BY CITRATE IN NORMAL AND DIABETIC MUSCLE.

A. Parmeggiani, R. H. Bowman, 1963, Biochemical and biophysical research communications.

Mechanism of ribosomal translocation. Translocation limits the rate of Escherichia coli elongation factor G-promoted GTP hydrolysis.

W. Wintermeyer, C. Urbanke, A. Parmeggiani, 1986, Journal of molecular biology.

Sites of Phosphorylation by Protein Kinase A in CDC25Mm/GRF1, a Guanine Nucleotide Exchange Factor for Ras*

E. Jacquet, A. Parmeggiani, C. Hountondji, 2001, The Journal of Biological Chemistry.

Enhancement of the GDP-GTP exchange of RAS proteins by the carboxyl-terminal domain of SCD25.

M. Jacquet, E. Boy-Marcotte, J. Camonis, 1990, Science.

Kirromycin, an inhibitor of protein biosynthesis that acts on elongation factor Tu.

A. Parmeggiani, H. Wolf, G. Chinali, 1974, Proceedings of the National Academy of Sciences of the United States of America.

Elongation factor Tu‐targeted antibiotics: Four different structures, two mechanisms of action

P. Nissen, A. Parmeggiani, 2006, FEBS letters.

The Guanine — Nucleotide Binding Proteins

L. Bosch, A. Parmeggiani, B. Kraal, 1989, Springer US.

Structure-Function Relationships of The Gtp-Binding Domain of Elongation Factor Tu

E. Jacquet, P. H. Anborgh, A. Parmeggiani, 1989 .

Enacyloxin IIa, an inhibitor of protein biosynthesis that acts on elongation factor Tu and the ribosome.

P. H. Anborgh, A. Parmeggiani, R. Cool, 1996, The EMBO journal.

[30] Purification of the amino acid polymerization factors from Escherichia coli

A. Parmeggiani, E. Gottschalk, C. Singer, 1971 .

Crystalline transfer factors from Escherichia coli.

A. Parmeggiani, 1968, Biochemical and biophysical research communications.

Hormonal Regulation of Cardiac Muscle Citrate

A. Parmeggiani, R. H. Bowman, 1965, Nature.

Substitution of Arg230 and Arg233 in Escherichia coli elongation factor Tu strongly enhances its pulvomycin resistance.

L. Bosch, A. Parmeggiani, B. Kraal, 1995, European journal of biochemistry.

Allosteric changes of the guanine nucleotide site of elongation factor EF‐Tu

L. Bosch, A. Parmeggiani, B. Kraal, 1982, FEBS letters.

Guanylylimidodiphosphate and its interaction with amino acid polymerization factors.

A. Parmeggiani, F. Eckstein, M. Kettler, 1971, Biochemical and biophysical research communications.

Properties of the catalytic domain of sdc25p, a yeast GDP/GTP exchange factor of Ras proteins. Complexation with wild-type Ras2p, [S24N]Ras2p and [R80D, N81D]Ras2p.

P. Poullet, A. Bernardi, A. Parmeggiani, 1995, European journal of biochemistry.

Characterization of the elongation factors from calf brain. 2. Functional properties of EF-1 alpha, the action of physiological ligands and kirromycin.

A. Parmeggiani, J. Créchet, 1986, European journal of biochemistry.

Modulation by monovalent and divalent cations of the guanosine-5'-triphosphatase activity dependent on elongation factor Tu.

R. Ivell, A. Parmeggiani, G. Sander, 1981, Biochemistry.

Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu.

J. Nyborg, P. Nissen, R. C. Nielsen, 2006, Biochemistry.

New antibiotic that acts specifically on the GTP‐bound form of elongation factor Tu.

P. H. Anborgh, A. Parmeggiani, P. H. Anborgh, 1991, The EMBO journal.

Differential actions of p60c-Src and Lck kinases on the Ras regulators p120-GAP and GDP/GTP exchange factor CDC25Mm.

S. Gonfloni, C. Giglione, A. Parmeggiani, 2001, European journal of biochemistry.

Physical modeling of ribosomes along messenger RNA: estimating kinetic parameters from ribosome profiling experiments using a ballistic model

C. Chevalier, A. Parmeggiani, Eric Rivals, 2022, 2208.12576.

Mutations at the RAS2 Locus that, in a ras1- Background, Impair the Growth of Yeast on Nonfermentable Carbon Sources

E. Vendittis, A. Parmeggiani, A. Vitelli, 1989 .

The N-terminal Moiety of CDC25Mm, a GDP/GTP Exchange Factor of Ras Proteins, Controls the Activity of the Catalytic Domain

E. Jacquet, A. Bernardi, A. Parmeggiani, 1997, The Journal of Biological Chemistry.

Inhibition of SDC25 C-domain-induced guanine-nucleotide exchange by guanine ring binding domain mutants of v-H-ras.

P. Poullet, Y. Hwang, A. Parmeggiani, 1993, The Journal of biological chemistry.

REGULATION OF GLYCOGENOLYSIS IN MUSCLE. II. CONTROL OF GLYCOGEN PHOSPHORYLASE REACTION IN ISOLATED PERFUSED HEART.

A. Parmeggiani, H. E. Morgan, 1964, The Journal of biological chemistry.

Regulation of glycogenolysis in muscle. Effects of glucagon and anoxia on lactate production, glycogen content, and phosphorylase activity in the perfused isolated rat heart.

P. J. Randle, A. Parmeggiani, M. Cornblath, 1963, The Journal of biological chemistry.

Long-range protein coupling mediated by critical low-energy modes of tubular lipid membranes.

S. Rochal, V. Lorman, A. Parmeggiani, 2010, Physical review letters.

Macrophage morphological plasticity and migration is Rac signalling and MMP9 dependant

K. Kissa, F. Djouad, A. Parmeggiani, 2021, Scientific Reports.

Phase separation of polymer-bound particles induced by loop-mediated one dimensional effective long-range interactions

C. Broedersz, A. Parmeggiani, J. Dorignac, 2018, Physical Review Research.

Totally asymmetric simple exclusion process with Langmuir kinetics.

Erwin Frey, A. Parmeggiani, T. Franosch, 2004, Physical review. E, Statistical, nonlinear, and soft matter physics.

Interaction of elongation factor Tu with the ribosome. A study using the antibiotic kirromycin.

R. Ivell, A. Parmeggiani, J. Créchet, 1980, Biochemistry.

Characterization of mammalian C-CDC25Mm exchange factor and kinetic properties of the exchange reaction intermediate p21.C-CDC25Mm.

E. Jacquet, A. Parmeggiani, S. Baouz, 1995, Biochemistry.

The C-terminal part of the CDC25 gene product has Ras-nucleotide exchange activity when present in a chimeric SDC25-CDC25 protein

M. Jacquet, C. Soustelle, P. Poullet, 1993, Current Genetics.

Participation in protein biosynthesis of transfer ribonucleic acids bearing altered 3'-terminal ribosyl residues.

A. Parmeggiani, F. Cramer, M. Sprinzl, 1974, Biochemistry.

The coupling with polypeptide synthesis of the GTPase activity dependent on elongation factor G.

A. Parmeggiani, G. Chinali, 1980, The Journal of biological chemistry.

Different regions of aminoacyl-tRNA regulate the function of elongation factor Tu.

A. Parmeggiani, R. Pizzano, O. Fasano, 1983, The Journal of biological chemistry.

The GTPase activity of elongation factor Tu and the 3'‐terminal end of aminoacyl‐tRNA

A. Parmeggiani, J. Guesnet, J. Créchet, 1981, FEBS letters.

Probing the reactivity of the GTP- and GDP-bound conformations of elongation factor Tu in complex with the antibiotic GE2270 A.

P. H. Anborgh, A. Parmeggiani, 1993, The Journal of biological chemistry.

Mechanisms of EF-Tu, a pioneer GTPase.

A. Parmeggiani, I. Krab, 2002, Progress in nucleic acid research and molecular biology.

EF-Tu, a GTPase odyssey.

A. Parmeggiani, I. Krab, A. Parmeggiani, 1998, Biochimica et biophysica acta.

Antibiotic resistance mechanisms of mutant EF-Tu species in Escherichia coli.

L. Bosch, R. Hilgenfeld, L. Zeef, 1995, Biochemistry and cell biology = Biochimie et biologie cellulaire.

Inhibition by siomycin and thiostrepton of both aminoacyl-tRNA and factor G binding to ribosomes.

J. Modolell, A. Parmeggiani, D. Vazquez, 1971, Proceedings of the National Academy of Sciences of the United States of America.

Properties of the crystalline amino acid polymerization factors from Escherichia coli: binding of G to ribosomes.

A. Parmeggiani, E. Gottschalk, 1969, Biochemical and biophysical research communications.

Role of split proteins from 30 S subunits in the ribosome—EF‐T GTPase reaction

A. Parmeggiani, R. C. Marsh, G. Sander, 1973, FEBS letters.

Properties of the elongation factors from Escherichia coli. Exchange of elongation factor G during elongation of polypeptide chain.

A. Parmeggiani, G. Chinali, 1973, European journal of biochemistry.

Isolation and characterization of two acidic proteins from the 50S subunit required for GTPase activities of both EF G and EF T.

A. Parmeggiani, R. C. Marsh, G. Sander, 1972, Biochemical and biophysical research communications.

Enacyloxin IIa Pinpoints a Binding Pocket of Elongation Factor Tu for Development of Novel Antibiotics*

J. Nyborg, P. Nissen, R. C. Nielsen, 2006, Journal of Biological Chemistry.

Mechanism of action of kirromycin-like antibiotics.

A. Parmeggiani, G. Swart, 1985, Annual review of microbiology.

Functional-Structural Analysis of Threonine 25, a Residue Coordinating the Nucleotide-bound Magnesium in Elongation Factor Tu*

A. Parmeggiani, I. Krab, 1999, The Journal of Biological Chemistry.

Function of sulfhydryl groups in ribosome-elongation factor G reactions. Assignment of guanine nucleotide binding site to elongation factor G.

A. Parmeggiani, G. Chinali, R. C. Marsh, 1975, The Journal of biological chemistry.

Crystallization and properties of rabbit skeletal muscle phosphofructokinase.

E. Krebs, A. Parmeggiani, J. Luft, 1966, The Journal of biological chemistry.

Preparation of nucleotide-free elongation factor Tu and its stabilization by the antibiotic kirromycin.

A. Parmeggiani, O. Fasano, J. Créchet, 1982, Analytical biochemistry.

Looping and clustering model for the organization of protein-DNA complexes on the bacterial genome

C. Broedersz, N. Wingreen, A. Parmeggiani, 2017, 1707.01373.

Properties of elongation factor G: its interaction with the ribosomal peptidyl-site.

A. Parmeggiani, G. Chinali, 1973, Biochemical and biophysical research communications.

Synthesis of guanosine 5'-di- and -triphosphate derivatives with modified terminal phosphates: effect on ribosome-elongation factor G-dependent reactions.

A. Parmeggiani, F. Eckstein, W. Bruns, 1975, Biochemistry.

Modelling the effect of ribosome mobility on the rate of protein synthesis

I. Neri, A. Parmeggiani, J. Dorignac, 2020, The European physical journal. E, Soft matter.

The Ras GDP/GTP cycle is regulated by oxidizing agents at the level of Ras regulators and effectors

M. Vanoni, C. Giglione, A. Parmeggiani, 2001, FEBS letters.

Analysis of the Role of the Hypervariable Region of Yeast Ras2p and Its Farnesylation in the Interaction with Exchange Factors and Adenylyl Cyclase*

E. Jacquet, A. Bernardi, A. Parmeggiani, 2000, The Journal of Biological Chemistry.

Distal Switch II Region of Ras2p Is Required for Interaction with Guanine Nucleotide Exchange Factor*

A. Bernardi, A. Parmeggiani, J. Créchet, 1996, The Journal of Biological Chemistry.

Effects of ions on the intrinsic activities of c-H-ras protein p21. A comparison with elongation factor Tu.

A. Parmeggiani, R. Cool, M. Mistou, 1992, European journal of biochemistry.

Role of glycine‐82 as a pivot point during the transition from the inactive to the active form of the yeast Ras2 protein

E. De Vendittis, A. Parmeggiani, A. C. Verrotti, 1991, FEBS letters.

A mouse CDC25-like product enhances the formation of the active GTP complex of human ras p21 and Saccharomyces cerevisiae RAS2 proteins.

L. Alberghina, E. Martegani, M. Vanoni, 1992, Journal of Biological Chemistry.

A New Function of p120-GTPase-activating Protein

M. Parrini, C. Giglione, A. Bernardi, 1997, The Journal of Biological Chemistry.

Elongation Factor Tu, a Model Protein for Studying Structural-Functional Relationships and Regulatory Mechanisms

A. Weijland, J. Jonák, A. Parmeggiani, 1994 .

Specific Functions of Elongation Factor Tu, a Molecular Switch in Protein Biosynthesis, as Studied by Site-Directed Mutagenesis

A. Weijland, P. H. Anborgh, A. Parmeggiani, 1993 .

Substitution of Val20 by Gly in elongation factor Tu. Effects on the interaction with elongation factors Ts, aminoacyl-tRNA and ribosomes.

E. Jacquet, A. Parmeggiani, 1989, European journal of biochemistry.

Determinants of Ras proteins specifying the sensitivity to yeast Ira2p and human p120‐GAP.

M. Parrini, A. Bernardi, A. Parmeggiani, 1996, The EMBO journal.

Raf-1 Is Involved in the Regulation of the Interaction between Guanine Nucleotide Exchange Factor and Ha-Ras

C. Giglione, A. Parmeggiani, 1998, The Journal of Biological Chemistry.

Substitution of histidine-84 and the GTPase mechanism of elongation factor Tu.

A. Parmeggiani, R. Cool, 1991, Biochemistry.

Properties and regulation of the GTPase activities of elongation factors Tu and G, and of initiation factor 2

A. Parmeggiani, G. Sander, 1981, Molecular and Cellular Biochemistry.

Activity of the 30-S CsCl core in elongation-factor-dependent GTP hydrolysis.

A. Parmeggiani, R. C. Marsh, G. Sander, 1976, European journal of biochemistry.

Effects of the antibiotic pulvomycin on the elongation factor Tu-dependent reactions. Comparison with other antibiotics.

P. H. Anborgh, A. Parmeggiani, S. Okamura, 2004, Biochemistry.

A comparative study of the 50S ribosomal subunit and several 50S subparticles in EF-T-and EF-G-dependent activities.

A. Parmeggiani, J. Voigt, R. C. Marsh, 1975, Biochemistry.

Elongation factor Tu: a molecular switch in protein biosynthesis

A. Weijland, P. H. Anborgh, A. Parmeggiani, 1992, Molecular microbiology.

Macrophage plasticity is Rac signalling and MMP9 dependant

K. Kissa, F. Djouad, A. Parmeggiani, 2019, bioRxiv.

Substitution of aspartic acid-80, a residue involved in coordination of magnesium, weakens the GTP binding and strongly enhances the GTPase of the G domain of elongation factor Tu.

B. Clark, P. H. Anborgh, M. Merola, 1992, Biochemistry.

Physical Modeling of a Sliding Clamp Mechanism for the Spreading of ParB at Short Genomic Distance from Bacterial Centromere Sites

A. Parmeggiani, J. Rech, J. Bouet, 2020, bioRxiv.

Relaxation time asymmetry in stator dynamics of the bacterial flagellar motor

Ashley L. Nord, A. Parmeggiani, J. Dorignac, 2021, bioRxiv.

REGULATION OF GLYCOGENOLYSIS IN MUSCLE. 3. CONTROL OF MUSCLE GLYCOGEN PHOSPHORYLASE ACTIVITY.

A. Parmeggiani, H. E. Morgan, 1964, The Journal of biological chemistry.

Fluoroaluminates do not affect the guanine-nucleotide binding centre of the peptide chain elongation factor EF-Tu.

J. Mesters, E. Jacquet, A. Parmeggiani, 1990, European journal of biochemistry.

Stochastic Self-Assembly of ParB Proteins Builds the Bacterial DNA Segregation Apparatus.

M. Nollmann, D. Cattoni, A. Parmeggiani, 2015, Cell systems.

Co-ordination and specificity of the action of GTPase-activating proteins and GDP/GTP-exchange factors on Ras.

M. Parrini, C. Giglione, A. Parmeggiani, 1997, Biochemical Society transactions.

Elongation factor Tu D138N, a mutant with modified substrate specificity, as a tool to study energy consumption in protein biosynthesis.

A. Weijland, A. Parmeggiani, G. Parlato, 1994, Biochemistry.

Hydrolysis of GTP by elongation factor Tu can be induced by monovalent cations in the absence of other effectors.

E. De Vendittis, A. Parmeggiani, O. Fasano, 1982, The Journal of biological chemistry.

Regulation of turnover GTPase activity of elongation factor G: the 30-S-coupled and 30-S-uncoupled reactions. Coordinated effects of cations, pH and polyamines.

A. Parmeggiani, J. Créchet, G. Parlato, 1978, European journal of biochemistry.

Effect of Kirromycin on Elongation Factor Tu

A. Parmeggiani, H. Wolf, G. Chinali, 1977 .

Effect of NH4+ and K+ on the activity of the ribosomal subunits in the EF-G- and EF-T-dependent GTP hydrolysis

A. Parmeggiani, J. Voigt, G. Sander, 1974 .

Mechanical instabilities of aorta drive blood stem cell production: a live study

K. Kissa, V. Lorman, A. Parmeggiani, 2019, Cellular and Molecular Life Sciences.

Foci of cyclin A2 interact with actin and RhoA in mitosis

J. Blanchard, A. Parmeggiani, M. Peter, 2016, Scientific Reports.

ATP-driven separation of liquid phase condensates in bacteria

M. Nollmann, A. Parmeggiani, J. Rech, 2019, bioRxiv.

NMR study of the phosphate-binding elements of Escherichia coli elongation factor Tu catalytic domain.

A. Redfield, D. F. Lowry, A. Parmeggiani, 1991, Biochemistry.

Mutant EF-Tu species reveal novel features of the enacyloxin IIa inhibition mechanism on the ribosome.

A. Parmeggiani, A. Zuurmond, B. Kraal, 1999, Journal of Molecular Biology.

Toward a model for the interaction between elongation factor Tu and the ribosome.

A. Weijland, A. Parmeggiani, 1993, Science.

tRNA and the guanosinetriphosphatase activity of elongation factor Tu.

A. Parmeggiani, G. Swart, 1989, Biochemistry.

Functional role of the noncatalytic domains of elongation factor Tu in the interactions with ligands.

P. H. Anborgh, A. Parmeggiani, R. Cool, 1998, Biochemistry.

Pulvomycin‐resistant mutants of E.coli elongation factor Tu.

L. Bosch, R. Hilgenfeld, L. Zeef, 1994, The EMBO journal.

Modification of elongation-factor-Tu . guanine-nucleotide interaction by kirromycin. A comparison with the effect of aminoacyl-tRNA and elongation factor Ts.

A. Parmeggiani, O. Fasano, J. Créchet, 1978, European journal of biochemistry.

Motor enzymes are remarkable molecular machines that use the energy derived from the hydrolysis of a nucleoside triphosphate to generate mechanical movement, achieved through dierent

M. Romano, A. Parmeggiani, L. Ciandrini, 2013 .

Micromechanics of Molecular Motors: Experiments and Theory

C. Schmidt, A. Parmeggiani, 2004 .

Stabilization by the 30S ribosomal subunit of the interaction of 50S subunits with elongation factor G and guanine nucleotide.

A. Parmeggiani, R. C. Marsh, 1977, Biochemistry.

Action of methanol on the assocation of ribosomal subunits and its effect on the GTPase activity of elongation factor G.

A. Parmeggiani, J. Voigt, 1973, Biochemical and biophysical research communications.

Why do two EF-Tu molecules act in the elongation cycle of protein biosynthesis?

A. Weijland, A. Parmeggiani, A Weijland, 1994, Trends in biochemical sciences.

Elongation factor Tu resistant to kirromycin in an Escherichia coli mutant altered in both tuf genes.

K. Hantke, A. Parmeggiani, H. Wolf, 1977, Proceedings of the National Academy of Sciences of the United States of America.

Differential modulation of the elongation-factor-G GTPase activity by tRNA bound to the ribosomal A-site or P-site.

A. Parmeggiani, G. Chinali, 1982, European journal of biochemistry.

Centrosomal targeting of Syk kinase is controlled by its catalytic activity and depends on microtubules and the dynein motor

A. Morel, P. Mangeat, C. Favard, 2013, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Taming Nonequilibrium Statistics

A. Parmeggiani, 2012 .

Non-Equilibrium Collective Transport on Molecular Highways

A. Parmeggiani, 2009 .

Transfer ribonucleic acid deprived of the C-C-A 3'-extremity can interact with elongation factor Tu.

A. Parmeggiani, D. Picone, 1983, Biochemistry.

Effects of the mutation glycine-222----aspartic acid on the functions of elongation factor Tu.

L. Bosch, A. Parmeggiani, B. Kraal, 1987, Biochemistry.

Modelling Collective Cytoskeletal Transport and Intracellular Traffic

Norbert Kern, Andrea Parmeggiani, Izaak Neri, 2014 .

Structure‐function relationships in the GTP binding domain of EF‐Tu: mutation of Val20, the residue homologous to position 12 in p21.

E. Jacquet, A. Parmeggiani, A Parmeggiani, 1988, The EMBO journal.

Supercoiled DNA and non-equilibrium formation of protein complexes: A quantitative model of the nucleoprotein ParBS partition complex

I. Junier, A. Parmeggiani, Thibaut Lepage, 2021, PLoS Comput. Biol..

Totally asymmetric simple exclusion process on networks.

Izaak Neri, Norbert Kern, Andrea Parmeggiani, 2011, Physical review letters.

Collective phenomena in intracellular processes.

Thomas Franosch, A. Parmeggiani, T. Franosch, 2004, Genome informatics. International Conference on Genome Informatics.

Understanding totally asymmetric simple-exclusion-process transport on networks: generic analysis via effective rates and explicit vertices.

Norbert Kern, N. Kern, A. Parmeggiani, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

Dynamic correlation functions and Boltzmann-Langevin approach for driven one-dimensional lattice gas.

Erwin Frey, Paolo Pierobon, A. Parmeggiani, 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.

Phase coexistence in driven one-dimensional transport.

Erwin Frey, A. Parmeggiani, T. Franosch, 2003, Physical review letters.

Variable Combinations of Specific Ephrin Ligand/Eph Receptor Pairs Control Embryonic Tissue Separation

F. Fagotto, R. Winklbauer, A. Parmeggiani, 2014, PLoS biology.

Characterization of the elongation factors from calf brain. 3. Properties of the GTPase activity of EF-1 alpha and mode of action of kirromycin.

A. Parmeggiani, J. Créchet, 1986, European journal of biochemistry.

Asparagine‐135 of elongation factor Tu is a crucial residue for the folding of the guanine nucleotide binding pocket

O. Bârzu, A. Weijland, A. Parmeggiani, 1993, FEBS letters.

Mutagenesis of the NH2-terminal domain of elongation factor Tu.

A. Weijland, P. H. Anborgh, A. Parmeggiani, 1990, Biochimica et biophysica acta.

Interaction between the different domains of aminoacyl-tRNA and the elongation-factor-Tu x kirromycin complex.

A. Parmeggiani, J. Guesnet, G. Parlato, 1983, European journal of biochemistry.

Energetic aspects of the EF-Tu-dependent GTPase activity. A study using the antibiotic kirromycin.

E. De Vendittis, A. Parmeggiani, V. Bocchini, 2005, European journal of biochemistry.

Hydrolysis of GTP by the elongation factor Tu·kirromycin complex

A. Parmeggiani, G. Sander, Richard Ivell, 1979, FEBS Letters.

Site-directed mutagenesis of elongation factor Tu. The functional and structural role of residue Cys81.

J. Jonák, P. H. Anborgh, A. Parmeggiani, 1992, European journal of biochemistry.

Structure-function relationships of elongation factor Tu. Isolation and activity of the guanine-nucleotide-binding domain.

B. Clark, K. Mortensen, A. Parmeggiani, 1989, European journal of biochemistry.

Histidine‐118 of elongation factor Tu: its role in aminoacyl‐tRNA binding and regulation of the GTPase activity

J. Jonák, A. Parmeggiani, Pieter H. Anborgh, 1994, FEBS letters.

Interaction Between Elongation Factor Tu and Aminoacyl-tRNA

A. Parmeggiani, R. Pizzano, O. Fasano, 1984 .

The Polypeptide Chain Elongation Factor Tu: Characterization of Mutants and Protein Engineering

E. Jacquet, P. H. Anborgh, A. Parmeggiani, 1988 .

Mechanism of the inhibition of protein synthesis by kirromycin. Role of elongation factor Tu and ribosomes.

A. Parmeggiani, H. Wolf, G. Chinali, 1977, European journal of biochemistry.

Altered regulation of the guanosine 5'-triphosphate activity in a kirromycin-resistant elongation factor Tu.

A. Parmeggiani, O. Fasano, 1981, Biochemistry.

Characterization of a kirromycin-resistant elongation factor Tu from Escherichia coli.

R. Ivell, A. Parmeggiani, O. Fasano, 1981, Biochemistry.

Specificity of elongation factor EF-TU for hydrophobic peptides.

A. Parmeggiani, T. Caldas, G. Richarme, 2002, Biochemical and biophysical research communications.

Low-frequency phonon dynamics and related thermal properties of axially stressed single-walled carbon nanotubes

A. Parmeggiani, M. Avramenko, S. Rochal, 2019, Journal of physics. Condensed matter : an Institute of Physics journal.

Elongation Factor Tu Mutants and Site-Directed Mutagenesis of tufA

K. Mortensen, J. Jonák, E. Jacquet, 1986 .

Stochastic modelling of collective motor protein transport through a crossing of microtubules.

Adélaïde Raguin, N. Kern, A. Parmeggiani, 2020, Journal of theoretical biology.

The minimal active domain of the mouse ras exchange factor CDC25Mm.

L. Alberghina, E. Martegani, P. Coccetti, 1995, Biochemical and biophysical research communications.

Energy transduction of isothermal ratchets: generic aspects and specific examples close to and far from equilibrium.

F. Jülicher, A. Ajdari, J. Prost, 1999, Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics.

Motor protein traffic regulation by supply–demand balance of resources

I. Neri, A. Parmeggiani, L. Ciandrini, 2014, Physical biology.

Form-finding of complex tensegrity structures: application to cell cytoskeleton modelling

Bernard Maurin, Patrick Cañadas, Philippe Montcourrier, 2006 .

Effect of kirromycin on elongation factor Tu. Location of the catalytic center for ribosome-elongation-factor-Tu GTPase activity on the elongation factor.

A. Parmeggiani, H. Wolf, G. Chinali, 1977, European Journal of Biochemistry.

Properties of a genetically engineered G domain of elongation factor Tu.

B. Clark, R. Cortese, K. Mortensen, 1987, Proceedings of the National Academy of Sciences of the United States of America.

Characterization of the elongation factors from calf brain. 1. Purification, molecular and immunological properties.

A. Parmeggiani, V. Bocchini, D. Canceill, 1986, European journal of biochemistry.

The functional and structural roles of residues Gln114 and Glu117 in elongation factor Tu.

B. Clark, A. Parmeggiani, R. Cool, 1990, European journal of biochemistry.

Structure-function relationships of elongation factor Tu as studied by mutagenesis.

A. Weijland, E. Jacquet, P. H. Anborgh, 1991, Biochimie.

Elongation factor Ts can act as a steric chaperone by increasing the solubility of nucleotide binding-impaired elongation factor-Tu.

A. Bernardi, A. Parmeggiani, R. te Biesebeke, 2001, Biochemistry.

Requirement of proteins S5 and S9 from 30S subunits for the ribosome-dependent GTPase activity of elongation factor G.

A. Parmeggiani, R. C. Marsh, 1973, Proceedings of the National Academy of Sciences of the United States of America.

Effect of adenine nucleotides and inorganic phosphate on muscle phosphorylase activity.

A. Parmeggiani, H. E. Morgan, 1962, Biochemical and biophysical research communications.

Signature of (anti)cooperativity in the stochastic fluctuations of small systems: application to the bacterial flagellar motor

Ashley L. Nord, F. Pedaci, A. Parmeggiani, 2023, 2307.00636.

Specific alterations of the EF‐Tu polypeptide chain considered in the light of its three‐dimensional structure.

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Transport on a lattice with dynamical defects.

M. Romano, E. Pitard, A. Parmeggiani, 2012, Physical review. E, Statistical, nonlinear, and soft matter physics.

Different kinetic properties of the two mutants, RAS2Ile152 and RAS2Val19, that suppress the CDC25 requirement in RAS/adenylate cyclase pathway in Saccharomyces cerevisiae.

M. Jacquet, J. Camonis, P. Poullet, 1990, The Journal of biological chemistry.

Modeling and live imaging of mechanical instabilities in the zebrafish aorta during hematopoiesis

K. Kissa, A. Parmeggiani, S. Rochal, 2021, Scientific Reports.

Totally asymmetric simple exclusion process on networks.

N. Kern, I. Neri, A. Parmeggiani, 2011, Physical review letters.

Viewpoint: Taming Nonequilibrium Statistics

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HEX-TASEP: dynamics of pinned domains for TASEP transport on a periodic lattice of hexagonal topology

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The arginine finger loop of yeast and human GAP is a determinant for the specificity toward Ras GTPase.

A. Parmeggiani, R. te Biesebeke, I. Krab, 2001, Biochemistry.

Properties and regulation of the catalytic domain of Ira2p, a Saccharomyces cerevisiae GTPase-activating protein of Ras2p.

M. Jacquet, M. Parrini, E. Jacquet, 1995, Biochemistry.

Chromatin structure from high resolution microscopy: scaling laws and microphase separation

A. Parmeggiani, E. Carlon, J. Palmeri, 2023, bioRxiv.

Crystallization of rabbit muscle phosphofructokinase

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Regulation of Glycogenolysis in Muscle: Effect of Glucagon and Anoxia on Glycogenolysis in the Perfused Rat Heart; Effect of Adenine Nucleotides, Glucose 6‐Phosphate and Inorganic Phosphate on Muscle Phosphorylase Activity.

W. Whelan, A. Parmeggiani, H. E. Morgan, 2008 .

Surfing on Protein Waves: Proteophoresis as a Mechanism for Bacterial Genome Partitioning.

M. Nollmann, V. Lorman, A. Parmeggiani, 2017, Physical review letters.