Arif Ozgun Harmanci

TurboFold: Iterative probabilistic estimation of secondary structures for multiple RNA sequences

Gaurav Sharma, David H. Mathews, Arif Ozgun Harmanci, 2011, BMC Bioinformatics.

Iterative estimation of structures of multiple RNA homologs: Turbofold

Gaurav Sharma, David H. Mathews, Arif Ozgun Harmanci, 2011, 2011 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Joint stochastic sampling for RNA secondary structure prediction

Gaurav Sharma, David H. Mathews, Arif Ozgun Harmanci, 2009, 2009 IEEE International Workshop on Genomic Signal Processing and Statistics.

Toward Turbo Decoding of RNA Secondary Structure

Gaurav Sharma, David H. Mathews, Arif Ozgun Harmanci, 2007, 2007 IEEE International Conference on Acoustics, Speech and Signal Processing - ICASSP '07.

Probabilistic computational methods for structural alignment of RNA sequences

Arif Ozgun Harmanci, 2010 .

Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign

Gaurav Sharma, David H. Mathews, Arif Ozgun Harmanci, 2007, BMC Bioinformatics.