Feng Ding

发表

Direct observation of a single nanoparticle-ubiquitin corona formation.

Slaven Radic, Pengyu Chen, Feng Ding, 2013, Nanoscale.

NanoEHS beyond Toxicity - Focusing on Biocorona.

M. Mortimer, Sijie Lin, T. P. Davis, 2017, Environmental science. Nano.

Mitigating Human IAPP Amyloidogenesis In Vivo with Chiral Silica Nanoribbons.

A. Purcell, P. Faridi, Sijie Lin, 2018, Small.

Competitive Binding of Natural Amphiphiles with Graphene Derivatives

Nicholas K. Geitner, R. Podila, N. Geitner, 2013, Scientific Reports.

Nucleation of β-rich oligomers and β-barrels in the early aggregation of human islet amyloid polypeptide.

T. P. Davis, P. Ke, Feng Ding, 2019, Biochimica et biophysica acta. Molecular basis of disease.

Amyloid Self-Assembly of hIAPP8-20 via the Accumulation of Helical Oligomers, α-Helix to β-Sheet Transition, and Formation of β-Barrel Intermediates.

A. Purcell, P. Faridi, T. P. Davis, 2019, Small.

Distinct oligomerization and fibrillization dynamics of amyloid core sequences of amyloid-beta and islet amyloid polypeptide.

Feng Ding, Yunxiang Sun, Xinwei Ge, 2017, Physical chemistry chemical physics : PCCP.

Probing the modulated formation of gold nanoparticles-beta-lactoglobulin corona complexes and their applications.

Woo-Jin Chang, S. Gunasekaran, Feng Ding, 2017, Nanoscale.

Inhibition of IAPP aggregation by insulin depends on the insulin oligomeric state regulated by zinc ion concentration

Feng Ding, Praveen Nedumpully-Govindan, 2015, Scientific Reports.

Modulating protein amyloid aggregation with nanomaterials.

T. P. Davis, P. Ke, Feng Ding, 2017, Environmental science. Nano.

Zinc-coordination and C-peptide complexation: a potential mechanism for the endogenous inhibition of IAPP aggregation.

T. P. Davis, P. Ke, Feng Ding, 2017, Chemical communications.

Nonnative Energetic Frustrations in Protein Folding at Residual Level: A Simulation Study of Homologous Immunoglobulin-like β-Sandwich Proteins

D. Ming, Feng Ding, Yunxiang Sun, 2018, International journal of molecular sciences.

The capricious electrostatic force: Revealing the signaling pathway in integrin α2-I domain

E. Alexov, Yunhui Peng, Lin Li, 2018 .

Graphene oxide inhibits hIAPP amyloid fibrillation and toxicity in insulin-producing NIT-1 cells.

T. P. Davis, P. Ke, Feng Ding, 2016, Physical chemistry chemical physics : PCCP.

Single-molecular hetero-amyloidosis of human islet amyloid polypeptide.

M. Higgins, T. P. Davis, P. Ke, 2019, Nano letters.

Synthesis and in vitro properties of iron oxide nanoparticles grafted with brushed phosphorylcholine and polyethylene glycol

J. Quinn, T. P. Davis, P. Ke, 2016 .

Star Polymers Reduce Islet Amyloid Polypeptide Toxicity via Accelerated Amyloid Aggregation

J. Quinn, T. P. Davis, P. Ke, 2017, Biomacromolecules.

Effect of fullerenol surface chemistry on nanoparticle binding-induced protein misfolding.

E. Salonen, P. Ke, Slaven Radic, 2014, Nanoscale.

Inhibition of amyloid beta toxicity in zebrafish with a chaperone-gold nanoparticle dual strategy

C. Parish, Sijie Lin, T. P. Davis, 2019, Nature Communications.

Amyloid Aggregation under the Lens of Liquid-Liquid Phase Separation.

T. P. Davis, P. Ke, Feng Ding, 2020, The journal of physical chemistry letters.

Islet Amyloid Polypeptide Promotes Amyloid-Beta Aggregation by Binding-Induced Helix-Unfolding of the Amyloidogenic Core.

Ye Yang, Weiguo Cao, Feng Ding, 2018, ACS chemical neuroscience.

Molecular insights into the oligomerization dynamics and conformations of amyloidogenic and non-amyloidogenic amylin from discrete molecular dynamics simulations.

Guanghong Wei, Ying Wang, Feng Ding, 2022, Physical chemistry chemical physics : PCCP.

Integrative structural dynamics probing of the conformational heterogeneity in synaptosomal-associated protein 25

K. Weninger, H. Sanabria, Feng Ding, 2021, Cell reports. Physical science.

Graphene quantum dots against human IAPP aggregation and toxicity in vivo.

Xueying Cao, Jingquan Liu, Sijie Lin, 2018, Nanoscale.

Nanosilver Mitigates Biofilm Formation via FapC Amyloidosis Inhibition.

D. Otzen, C. Landersdorfer, I. Hussain, 2020, Small.

Molecular Insights into the Self-Assembly of Block Copolymer Suckerin Polypeptides into Nanoconfined β-Sheets.

Guanghong Wei, Feng Ding, C. Tong, 2022, Small.

Enhanced Label-Free Nanoplasmonic Cytokine Detection in SARS-CoV-2 Induced Inflammation Using Rationally Designed Peptide Aptamer

Feng Ding, Pengyu Chen, Weiqiang Cheng, 2022, ACS applied materials & interfaces.

Modulating Nanodroplet Formation En Route to Fibrillization of Amyloid Peptides with Designed Flanking Sequences.

P. Ke, Feng Ding, N. Andrikopoulos, 2022, Biomacromolecules.

Peptide Self‐Assembly: Amyloid Self‐Assembly of hIAPP8‐20 via the Accumulation of Helical Oligomers, α‐Helix to β‐Sheet Transition, and Formation of β‐Barrel Intermediates (Small 18/2019)

A. Purcell, P. Faridi, T. P. Davis, 2019, Small.

Molecular Insights into the Misfolding and Dimerization Dynamics of the Full-Length α-Synuclein from Atomistic Discrete Molecular Dynamics Simulations.

Guanghong Wei, Ying Wang, Feng Ding, 2022, ACS chemical neuroscience.

Anionic nanoplastic exposure induces endothelial leakiness

D. Leong, Chunying Chen, Sijie Lin, 2022, Nature Communications.

Endothelial Leakiness Induced by Amyloid Protein Aggregation

D. Leong, N. Andrikopoulos, P. Ke, 2022 .

Labeling native bacterial RNA in live cells

C. Cantor, N. Broude, I. Smolina, 2014, Cell Research.

Structures and dynamics of β-barrel oligomer intermediates of amyloid-beta16-22 aggregation.

Feng Ding, Yunxiang Sun, Xinwei Ge, 2018, Biochimica et biophysica acta. Biomembranes.

Binding of cytoskeletal proteins with silver nanoparticles

Nicholas K. Geitner, N. Geitner, P. Ke, 2013 .

Accelerated Amyloid Beta Pathogenesis by Bacterial Amyloid FapC

R. Mezzenga, D. Otzen, Sijie Lin, 2020, Advanced science.

Out-of-Equilibrium Biophysical Chemistry: The Case for Multidimensional, Integrated Single-Molecule Approaches

H. Sanabria, J. Alper, Feng Ding, 2021, The journal of physical chemistry. B.

Elevated amyloidoses of human IAPP and amyloid beta by lipopolysaccharide and their mitigation by carbon quantum dots.

M. Parsa, M. Mortimer, A. Chaffee, 2020, Nanoscale.

Deviation from the Unimolecular Micelle Paradigm of PAMAM Dendrimers Induced by Strong Interligand Interactions

D. Ladner, T. P. Davis, N. Geitner, 2015 .

Structure-function relationship of PAMAM dendrimers as robust oil dispersants.

D. Ladner, N. Geitner, P. Ke, 2014, Environmental Science and Technology.

Amyloidosis Inhibition, a New Frontier of the Protein Corona.

Chunying Chen, T. P. Davis, P. Ke, 2020, Nano today.

Misfolding and Self-Assembly Dynamics of Microtubule-Binding Repeats of the Alzheimer-Related Protein Tau

Feng Ding, Huan He, Yuying Liu, 2021, J. Chem. Inf. Model..

Direct Observation of β-Barrel Intermediates in the Self-Assembly of Toxic SOD128-38 and Absence in Nontoxic Glycine Mutants

X. Duan, Feng Ding, Yunxiang Sun, 2021, J. Chem. Inf. Model..

Spontaneous Formation of β-sheet Nano-barrels during the Early Aggregation of Alzheimer's Amyloid Beta.

C. Parish, T. P. Davis, P. Ke, 2021, Nano today.

Ensemble switching unveils a kinetic rheostat mechanism of the eukaryotic thiamine pyrophosphate riboswitch

H. Sanabria, J. Alper, Feng Ding, 2021, bioRxiv.

Identifying weak interdomain interactions that stabilize the supertertiary structure of the N-terminal tandem PDZ domains of PSD-95

Feng Ding, Bo Wang, Hugo Sanabria, 2018, Nature Communications.

αB-Crystallin Chaperone Inhibits Aβ Aggregation by Capping the β-Sheet-Rich Oligomers and Fibrils.

Feng Ding, Yunxiang Sun, 2020, The journal of physical chemistry. B.

Implications of peptide assemblies in amyloid diseases.

R. Mezzenga, P. Ke, Feng Ding, 2017, Chemical Society reviews.

Brushed polyethylene glycol and phosphorylcholine for grafting nanoparticles against protein binding.

J. Quinn, T. P. Davis, P. Ke, 2016, Polymer chemistry.

Understanding Effects of PAMAM Dendrimer Size and Surface Chemistry on Serum Protein Binding with Discrete Molecular Dynamics Simulations.

T. P. Davis, P. Ke, Feng Ding, 2018, ACS sustainable chemistry & engineering.

Graphene quantum dots rescue protein dysregulation of pancreatic β-cells exposed to human islet amyloid polypeptide

A. Purcell, P. Faridi, M. Mortimer, 2019, Nano Research.

Mitigation of Amyloidosis with Nanomaterials

T. P. Davis, P. Ke, Feng Ding, 2019, Advanced materials.

Amyloidosis: Mitigation of Amyloidosis with Nanomaterials (Adv. Mater. 18/2020)

T. P. Davis, P. Ke, Feng Ding, 2020 .

Structural Perturbation of Monomers Determines the Amyloid Aggregation Propensity of Calcitonin Variants

Guanghong Wei, Ying Wang, Feng Ding, 2022, Journal of Chemical Information and Modeling.

Morphological Determinants of Carbon Nanomaterial-Induced Amyloid Peptide Self-Assembly

Feng Ding, Yunxiang Sun, Yanting Xing, 2020, Frontiers in Chemistry.

Nanoscale inhibition of polymorphic and ambidextrous IAPP amyloid aggregation with small molecules

R. Mezzenga, T. P. Davis, P. Ke, 2018, Nano Research.

Lysophosphatidylcholine modulates the aggregation of human islet amyloid polypeptide.

T. P. Davis, P. Ke, C. Nowell, 2017, Physical chemistry chemical physics : PCCP.

Effects of Protein Corona on IAPP Amyloid Aggregation, Fibril Remodelling, and Cytotoxicity

T. P. Davis, P. Ke, Feng Ding, 2017, Scientific Reports.

CSAR Benchmark of Flexible MedusaDock in Affinity Prediction and Nativelike Binding Pose Selection

Feng Ding, Praveen Nedumpully-Govindan, Domen B. Jemec, 2016, J. Chem. Inf. Model..

Inhibition of hIAPP Amyloid Aggregation and Pancreatic β-Cell Toxicity by OH-Terminated PAMAM Dendrimer.

E. Hanssen, T. P. Davis, P. Ke, 2016, Small.

Thermostability and reversibility of silver nanoparticle-protein binding.

Hong Yin, David A Winkler, Pengyu Chen, 2015, Physical chemistry chemical physics : PCCP.

Amphiphilic surface chemistry of fullerenols is necessary for inhibiting the amyloid aggregation of alpha-synuclein NACore.

Ye Yang, Weiguo Cao, T. P. Davis, 2019, Nanoscale.

β-barrel Oligomers as Common Intermediates of Peptides Self-Assembling into Cross-β Aggregates

Feng Ding, Yunxiang Sun, Yanting Xing, 2018, Scientific Reports.

A Thermodynamics Model for the Emergence of a Stripe-like Binary SAM on a Nanoparticle Surface.

T. P. Davis, P. Ke, Feng Ding, 2015, Small.

Stabilizing Off-pathway Oligomers by Polyphenol Nanoassemblies for IAPP Aggregation Inhibition

Thomas P. Davis, Feng Ding, Praveen Nedumpully-Govindan, 2016, Scientific Reports.

A Framework of Paracellular Transport via Nanoparticles‐Induced Endothelial Leakiness

D. Leong, T. P. Davis, P. Ke, 2021, Advanced science.

Zinc-Epigallocatechin-3-gallate Network-Coated Nanocomposites against the Pathogenesis of Amyloid-Beta.

J. Quinn, P. Ke, Feng Ding, 2023, ACS applied materials & interfaces.

Contrasting effects of nanoparticle-protein attraction on amyloid aggregation.

T. P. Davis, P. Ke, Slaven Radic, 2015, RSC advances.

Fate, Behavior, and Biophysical Modeling of Nanoparticles in Living Systems

E. Salonen, P. Ke, Feng Ding, 2016 .

SEVI Inhibits Aβ Amyloid Aggregation by Capping the β-Sheet Elongation Edges

Feng Ding, Yunxiang Sun, Jia Xu, 2023, J. Chem. Inf. Model..

Promotion or Inhibition of Islet Amyloid Polypeptide Aggregation by Zinc Coordination Depends on Its Relative Concentration.

Ye Yang, Weiguo Cao, Feng Ding, 2015, Biochemistry.

Physical and Toxicological Profiles of Human IAPP Amyloids and Plaques.

R. Zhou, A. Purcell, P. Faridi, 2019, Science bulletin.

Ultrasmall Molybdenum Disulfide Quantum Dots Cage Alzheimer's Amyloid Beta to Restore Membrane Fluidity.

D. Leong, T. P. Davis, P. Ke, 2021, ACS applied materials & interfaces.

Dynamic Protein Corona of Gold Nanoparticles with an Evolving Morphology.

D. Leong, Sijie Lin, P. Ke, 2021, ACS applied materials & interfaces.

Human Plasma Protein Corona of Aβ Amyloid and Its Impact on IAPP Cross-Seeding.

A. Purcell, P. Faridi, T. P. Davis, 2020, Biomacromolecules.

Inhibition of Amyloid Aggregation and Toxicity with Janus Iron Oxide Nanoparticles.

P. Ke, Feng Ding, Aleksandr Kakinen, 2021, Chemistry of materials : a publication of the American Chemical Society.

Differential Binding and Conformational Dynamics of Tau Microtubule-Binding Repeats with a Preformed Amyloid-β Fibril Seed.

Feng Ding, Yunxiang Sun, Zhiyuan Song, 2023, ACS chemical neuroscience.

PAMAM dendrimers and graphene: materials for removing aromatic contaminants from water.

Ryan S. DeFever, Nicholas K. Geitner, P. Bhattacharya, 2015, Environmental science & technology.

Amyloid Aggregation and Liquid-Liquid Phase Separation from the Perspective of Phase Transitions.

Feng Ding, Zhiyuan Song, Zhenzhen Zhang, 2023, The journal of physical chemistry. B.

The membrane axis of Alzheimer's nanomedicine.

T. P. Davis, P. Ke, Feng Ding, 2020, Advanced nanobiomed research.

Thermo- and pH-responsive fibrillization of squid suckerin A1H1 peptide.

Feng Ding, Yunxiang Sun, 2020, Nanoscale.

Fuzzy supertertiary interactions within PSD-95 enable ligand binding

C. Seidel, Sujit Basak, Franceine S. Welcome, 2022, bioRxiv.

Structural and energetic determinants of tyrosylprotein sulfotransferase sulfation specificity

Emil Alexov, Lin Li, Praveen Nedumpully-Govindan, 2014, Bioinform..

Interaction of firefly luciferase and silver nanoparticles and its impact on enzyme activity

M. Mortimer, P. Ke, A. Kahru, 2013, Nanotechnology.

Cofibrillization of Pathogenic and Functional Amyloid Proteins with Gold Nanoparticles against Amyloidogenesis.

R. Mezzenga, T. P. Davis, P. Ke, 2017, Biomacromolecules.

Direct observation of a single nanoparticle-ubiquitin corona formation.

Nicholas K. Geitner, P. Ke, Slaven Radic, 2013, Nanoscale.

Graphene oxide inhibits hIAPP amyloid fibrillation and toxicity in insulin-producing NIT-1 cells.

T. P. Davis, P. Ke, Feng Ding, 2016, Physical chemistry chemical physics : PCCP.

Direct Observation of Seeded Conformational Conversion of hIAPP In Silico Reveals the Mechanisms for Morphological Dependence and Asymmetry of Fibril Growth

P. Ke, Feng Ding, Yunxiang Sun, 2023, J. Chem. Inf. Model..

Endothelial leakiness elicited by amyloid protein aggregation

D. Leong, Feng Ding, Aleksandr Kakinen, 2024, Nature communications.

Dissecting the Self-assembly Dynamics of Imperfect Repeats in α-Synuclein

Feng Ding, Yunxiang Sun, Jiangfang Lian, 2023, J. Chem. Inf. Model..

Computational Investigation of Coaggregation and Cross-Seeding between Aβ and hIAPP Underpinning the Cross-Talk in Alzheimer's Disease and Type 2 Diabetes.

Feng Ding, Yunxiang Sun, Fengjuan Huang, 2024, Journal of chemical information and modeling.

Nanoplastic Stimulates the Amyloidogenesis of Parkinson's Alpha-Synuclein NACore.

Feng Ding, N. Andrikopoulos, Pu Chun Ke, 2023, Small.

Spike Protein Fragments Promote Alzheimer's Amyloidogenesis.

P. Ke, Feng Ding, N. Andrikopoulos, 2023, ACS applied materials & interfaces.

Computational insights into the cross-talk between medin and Aβ: implications for age-related vascular risk factors in Alzheimer’s disease

Feng Ding, Yunxiang Sun, Yu Zou, 2024, Briefings Bioinform..