Ryo Yoshida

发表

Estimating time-dependent gene networks from time series microarray data by dynamic linear models with Markov switching

Tomoyuki Higuchi, Seiya Imoto, Ryo Yoshida, 2005, 2005 IEEE Computational Systems Bioinformatics Conference (CSB'05).

Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning

Masao Nagasaki, Satoru Miyano, Teppei Shimamura, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Chemical robot —Design of self-walking gel—

Shuji Hashimoto, Yusuke Hara, Shingo Maeda, 2007, 2007 IEEE/RSJ International Conference on Intelligent Robots and Systems.

Repulsive parallel MCMC algorithm for discovering diverse motifs from large sequence sets

Ryo Yoshida, Hisaki Ikebata, Ryo Yoshida, 2015, Bioinform..

Bayesian molecular design with a chemical language model

Kenta Hongo, Ryo Maezono, Ryo Yoshida, 2017, Journal of Computer-Aided Molecular Design.

Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space

Takayuki Teramoto, Takeshi Ishihara, Osamu Hirose, 2016, PLoS Comput. Biol..

Lattice reformulation of integer programming problems

Karen Aardal, Martin Beck, Volkmar Welker, 2008 .

Study on the I-PD Position Controller Design for Step Motor Drives

Yoshinori Hirata, Ryo Yoshida, Yasuzumi Ochiai, 2004 .

Design of chemo-mechanical actuator using self-oscillating gel

Shuji Hashimoto, Shingo Maeda, Ryo Yoshida, 2004, 2004 IEEE International Conference on Robotics and Biomimetics.

Clinical planning support system-CliPSS

Tatsuo Miyazawa, Ryo Yoshida, Akio Doi, 1993, IEEE Computer Graphics and Applications.

A General Class of Transfer Learning Regression without Implementation Cost pdf

Kenji Fukumizu, Song Liu, Stephen Wu, 2020, ArXiv.

Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing

Masao Nagasaki, Satoru Miyano, Tomoyuki Higuchi, 2009, Pacific Symposium on Biocomputing.

A mixed factors model for dimension reduction and extraction of a group structure in gene expression data

Tomoyuki Higuchi, Seiya Imoto, Ryo Yoshida, 2004, Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004..

Development of novel self-oscillating molecular robot fueled by organic acid

Shuji Hashimoto, Yusuke Hara, Shingo Maeda, 2009, 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems.

Analysis of Locomotion Trajectories of the Wheel-type Robot in a Straight Pipe

Tokuji Okada, Ryo Yoshida, Tomoyasu Ohya, 2000 .

Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models

Satoru Miyano, Tomoyuki Higuchi, Rui Yamaguchi, 2008, Bioinform..

Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models

Satoru Miyano, Tomoyuki Higuchi, Seiya Imoto, 2008, 2008 Second Asia International Conference on Modelling & Simulation (AMS).

A New Master Control System for NHK's Local Stations

Ryo Yoshida, Masahiro Ohta, Morii Yutaka, 1985 .

Bayesian learning of biological pathways on genomic data assimilation

Masao Nagasaki, Satoru Miyano, Tomoyuki Higuchi, 2008, Bioinform..

Self-Oscillating Gel Actuator for Chemical Robotics

Shuji Hashimoto, Yusuke Hara, Shingo Maeda, 2008, Adv. Robotics.

A Penalized Likelihood Estimation on Transcriptional Module-Based Clustering

Tomoyuki Higuchi, Seiya Imoto, Ryo Yoshida, 2005, ICCSA.

Orientation Monitoring of the Robot in a Straight Pipe by Utilizing Free Rocking Mechanism of Wheel Shaft around Robot Stem

Tokuji Okada, Ryo Yoshida, Tomoyasu Ohya, 2001 .

Recreation of the periodic table with an unsupervised machine learning algorithm pdf

Kiyoyuki Terakura, Ryo Yoshida, Chang Liu, 2019, Scientific Reports.

Automated detection and tracking of many cells by using 4D live-cell imaging data

Takayuki Teramoto, Takeshi Ishihara, Osamu Hirose, 2014, Bioinform..

A state space representation of VAR models with sparse learning for dynamic gene networks.

Masao Nagasaki, Satoru Miyano, Teppei Shimamura, 2010, Genome informatics. International Conference on Genome Informatics.

Bayesian Learning in Sparse Graphical Factor Models via Variational Mean-Field Annealing

Mike West, Ryo Yoshida, M. West, 2010, J. Mach. Learn. Res..

SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter

Takeshi Ishihara, Osamu Hirose, Ryo Yoshida, 2015, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods

Masao Nagasaki, Satoru Miyano, Teppei Shimamura, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Design of Self-Oscillating Gels and Application to Biomimetic Actuators

Ryo Yoshida, R. Yoshida, 2010, Sensors.

Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2006, Genome informatics. International Conference on Genome Informatics.

3D web environment for knowledge management

Tatsuo Miyazawa, Ryo Yoshida, Takaaki Murao, 2000, Future Gener. Comput. Syst..

Prototyping and Evaluation of New Remote Controls for People with Visual Impairment

Michiaki Yasumura, Ryo Yoshida, Megumi Yoshida, 2006, ICCHP.

Materials Informatics: Small Data Problem and Transfer Learning

Ryo Yoshida, 2019 .

Chemical robot-design of peristaltic polymer gel actuator-

Shuji Hashimoto, Yusuke Hara, Shingo Maeda, 2009, 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems.

Implementation of Sequential Importance Sampling in GPGPU

Tomoyuki Higuchi, Masaya M. Saito, Keisuke Hayashi, 2010, 2010 13th International Conference on Information Fusion.

Bayesian Learning in Sparse Graphical Factor Models via Annealed Entropy

Ryo Yoshida, Ryo Yoshida, 2010 .

Bayesian experts in exploring reaction kinetics of transcription circuits

Tomoyuki Higuchi, Masaya M. Saito, Hiromichi Nagao, 2010, Bioinform..

Statistical inference of the rate of RNA polymerase II elongation by total RNA sequencing

Shinsuke Koyama, Ryo Yoshida, Yumi Kawamura, 2018, Bioinform..

Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data

Satoru Miyano, Seiya Imoto, Rui Yamaguchi, 2007, ISBRA.

A study on EGG affected by viscosity and shear rate dependence of fluid and semi-solid diets

Tatsuya Ishikawa, Hiroshi Inoue, Keita Takahashi, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

A Bayesian algorithm for retrosynthesis

Stephen Wu, Ryo Yoshida, Zhongliang Guo, 2020, J. Chem. Inf. Model..

Evaluation of manual test for anterior cruciate ligament injury using a body-mounted sensor

Koichi Sagawa, Ryo Yoshida, Toshiaki Tsukamoto, 2007, ICMIT: Mechatronics and Information Technology.

Self-oscillating polymer gels as novel biomimetic materials

Ryo Yoshida, R. Yoshida, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2007, 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering.

An ensemble learning approach to auto-annotation for whole-brain C. elegans imaging

Stephen Wu, Takayuki Teramoto, Takeshi Ishihara, 2017, bioRxiv.

SiGN-SSM: open source parallel software for estimating gene networks with state space models

Masao Nagasaki, Satoru Miyano, Seiya Imoto, 2011, Bioinform..

Atom Environment Kernels on Molecules

Tomoyuki Higuchi, Hiroshi Yamashita, Ryo Yoshida, 2014, J. Chem. Inf. Model..

A New Cell Phone Remote Control for People with Visual Impairment

Michiaki Yasumura, Ryo Yoshida, M. Yasumura, 2008, ICCHP.

ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles

Satoru Miyano, Tomoyuki Higuchi, Seiya Imoto, 2006, Bioinform..

ExonMiner: Web service for analysis of GeneChip Exon array data

Masao Nagasaki, Satoru Miyano, Seiya Imoto, 2008, BMC Bioinformatics.

Lower Perplexity is Not Always Human-Like pdf

Yohei Oseki, Masayuki Asahara, Tatsuki Kuribayashi, 2021, ACL/IJCNLP.

Modeling Human Sentence Processing with Left-Corner Recurrent Neural Network Grammars

Yohei Oseki, Hiroshi Noji, Ryo Yoshida, 2021, EMNLP.

Modeling and estimation of dynamic EGFR pathway by data assimilation approach using time series proteomic data.

Masao Nagasaki, Satoru Miyano, Tomoyuki Higuchi, 2006, Genome informatics. International Conference on Genome Informatics.

Clustering samples characterized by time course gene expression profiles using the mixture of state space models.

Satoru Miyano, Tomoyuki Higuchi, Seiya Imoto, 2007, Genome informatics. International Conference on Genome Informatics.

Identification of activated transcription factors from microarray gene expression data of Kampo medicine-treated mice.

Masao Nagasaki, Satoru Miyano, Seiya Imoto, 2007, Genome informatics. International Conference on Genome Informatics.

Predicting differences in gene regulatory systems by state space models.

Masao Nagasaki, Satoru Miyano, Teppei Shimamura, 2008, Genome informatics. International Conference on Genome Informatics.

A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2006, Genome informatics. International Conference on Genome Informatics.

91 FADS AND FALLACIES IN THE NAME OF SMALL-SAMPLE MICROARRAY CLASSIFICATION

Rabab K. Ward, Petar M. Djuric, Sergios Theodoridis, 2007 .

Epidermal Growth Factor Receptor Tyrosine Kinase Defines Critical Prognostic Genes of Stage I Lung Adenocarcinoma

Masao Nagasaki, Satoru Miyano, Teppei Shimamura, 2012, PloS one.