J. Windig

发表

Precision of methods for calculating identity-by-descent matrices using multiple markers

Ricardo Pong-Wong, John A Woolliams, Anders Christian Sørensen, 2002, Genetics Selection Evolution.

The effect of rare alleles on estimated genomic relationships from whole genome sequence data

M. Calus, J. Windig, G. Leroy, 2015, BMC Genetics.

Trends in genome-wide and region-specific genetic diversity in the Dutch-Flemish Holstein–Friesian breeding program from 1986 to 2015

R. Veerkamp, J. Windig, P. Bijma, 2018, Genetics Selection Evolution.

Consequences for diversity when prioritizing animals for conservation with pedigree or genomic information.

M. Calus, R. Veerkamp, J. Windig, 2011, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Genomic prediction based on data from three layer lines using non-linear regression models

M. Calus, J. Windig, Heyun Huang, 2014, Genetics Selection Evolution.

Genetic parameters for predicted methane production and potential for reducing enteric emissions through genomic selection.

M P L Calus, R F Veerkamp, J Dijkstra, 2011, Journal of dairy science.

Rapid haplotype reconstruction in predigrees with dense marker maps

J. Windig, T. Meuwissen, 2004 .

Indicators for livestock and crop biodiversity

J. Windig, N. X. Trach, D. Eaton, 2006 .

Revised Calculation of Kalinowski’s Ancestral and New Inbreeding Coefficients

J. Windig, I. Curik, G. Kövér, 2020 .

Life cycle and abundance oflongitarsus jacobaeae [Col.: Chrysomelidae], biocontrol agent ofSenecio jacobaea

J. Windig, 1991, Entomophaga.

How Useful is Fluctuating Asymmetry in Conservation Biology: Asymmetry in Rare and Abundant Coenonympha Butterflies

S. Nylin, J. Windig, Pekka T. Rintamäki, 2000, Journal of Insect Conservation.

Assigning breed origin to alleles in crossbred animals

M. Calus, J. Bastiaansen, J. Windig, 2016, Genetics Selection Evolution.

Effects of Population Size and Food Stress on Fitness‐Related Characters in the Scarce Heath, a Rare Butterfly in Western Europe

C. Wiklund, S. Nylin, J. Windig, 2001 .

Genomic prediction based on data from three layer lines: a comparison between linear methods

M. Calus, J. Windig, J. ten Napel, 2014, Genetics Selection Evolution.

Genomic selection and inbreeding and kinship in Dutch-Flemish Holstein Friesian cattle

R. Veerkamp, J. Windig, P. Bijma, 2018 .

Alternative somatic cell count traits as mastitis indicators for genetic selection.

J. T. Napel, J. Windig, G. de Jong, 2008, Journal of dairy science.

Characterization of distributions of somatic cell counts.

T. Lam, J. Windig, G. de Jong, 2009, Journal of dairy science.

The association between somatic cell count patterns and milk production prior to mastitis

M. Calus, R. Veerkamp, J. Windig, 2005 .

Genetic relationships among mastitis and alternative somatic cell count traits in the first 3 lactations of Swedish Holsteins.

J. Urioste, J. Windig, J. Franzén, 2012, Journal of dairy science.

Genetic Variability of Alternative Somatic Cell Count Traits and their Relationship with Clinical and Subclinical Mastitis

J. Urioste, J. Windig, J. Franzén, 2011 .

The use of data from sampling for bacteriology for genetic selection against clinical mastitis.

T. Lam, J. Windig, G. de Jong, 2008, Journal of dairy science.

Conservation priorities for Ethiopian sheep breeds combining threat status, breed merits and contributions to genetic diversity

O. Hanotte, J. V. van Arendonk, J. Windig, 2008, Genetics Selection Evolution.

Associations among descriptors of herd management and phenotypic and genetic levels of health and fertility.

M. Calus, R. Veerkamp, J. Windig, 2005, Journal of dairy science.

Pedigree- and marker-based methods in the estimation of genetic diversity in small groups of Holstein cattle.

M. Calus, R. Veerkamp, J. Windig, 2012, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Effect of Herd Environment on Phenotypic and Genetic Levels of Survival

M. Calus, R. Veerkamp, J. Windig, 2004 .

Effects of management and genetics on udder health and milk composition in dairy cows.

M. Calus, R. Veerkamp, J. Windig, 2007, Journal of dairy science.

Simultaneous estimation of genotype by environment interaction accounting for discrete and continuous environmental descriptors in Irish dairy cattle.

R. Veerkamp, J. Windig, H. Mulder, 2011, Journal of dairy science.

Unique genetic signature and selection footprints in Dutch population of German Longhaired Pointer dogs

M. Groenen, R. Crooijmans, M. Bosse, 2022, Animal genetics.

Chapter 6. Management of cryo-collections with genomics tools

J. Windig, P. Berg, 2017 .

Assessment of genomic selection for introgression of polledness into Holstein Friesian cattle by simulation

M. Calus, R. Veerkamp, J. Windig, 2015 .

Microsatellite diversity of the Nordic type of goats in relation to breed conservation: how relevant is pure ancestry?

P. Taberlet, G. Luikart, F. Pompanon, 2017, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Centre for Genetic Resources, the Netherlands (CGN)

J. Windig, D. Eaton, R. Hu, 2006 .

How developments in cryobiology, reproductive technologies and conservation genomics could shape gene banking strategies for (farm) animals.

H. Woelders, J. Windig, S. Hiemstra, 2012, Reproduction in domestic animals = Zuchthygiene.

Trade-offs between melanization, development time and adult size in Inachis io and Araschnia levana (Lepidoptera: Nymphalidae)?

J. Windig, 1999, Heredity.

Conservation priorities for Ethiopian sheep breeds combining threat status, breed merits and contributions to genetic diversity.

O. Hanotte, J. V. van Arendonk, J. Windig, 2008, Genetics, selection, evolution : GSE.

Eradication of scrapie with selective breeding: are we nearly there?

F. V. van Zijderveld, J. Windig, A. Bossers, 2010, BMC veterinary research.

Genotype by environment interaction for livability of dairy calves from first parity cows.

M. Calus, J. Windig, M. van Pelt, 2015, Animal : an international journal of animal bioscience.

Genotype by environment interaction for livability of dairy calves from fi rst parity cows

M. Calus, J. Windig, W. Ouweltjes, 2015 .

Influence of herd environment on health and fertility and their relationship with milk production.

M P L Calus, R F Veerkamp, M. Calus, 2005, Journal of dairy science.

Selection for scrapie resistance and simultaneous restriction of inbreeding in the rare sheep breed "Mergellander".

J. Windig, L. Kaal, H. Meuleman, 2007, Preventive veterinary medicine.

Genetic diversity and measures to reduce inbreeding in Friesian Horses

H. Bovenhuis, J. Windig, B. Ducro, 2014 .

Investigation of a Simple Model for Within-Flock Transmission of Scrapie

J. Windig, T. Hagenaars, 2015, PloS one.

Variation in the prion protein sequence in Dutch goat breeds.

J. Langeveld, J. Windig, A. Bossers, 2016, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Effects on inbreeding of different strategies aimed at eliminating scrapie sensitivity alleles in rare sheep breeds in The Netherlands

J. Windig, L. Moll, L. Lansbergen, 2004 .

AS 3/524.fm

J. Windig, H. Eding, L. Kaal, 2004 .

Population structure, genetic variation and morphological diversity in indigenous sheep of Ethiopia.

O. Hanotte, J. V. van Arendonk, J. Windig, 2007, Animal genetics.

Piter Bijma, Jack J. Windig, J. V. van Arendonk, 2006, Genetics.

How Depressing Is Inbreeding? A Meta-Analysis of 30 Years of Research on the Effects of Inbreeding in Livestock

J. Windig, P. Bijma, H. P. Doekes, 2021, Genes.

Selection and Drift: A Comparison between Historic and Recent Dutch Friesian Cattle and Recent Holstein Friesian Using WGS Data

R. Veerkamp, I. Hulsegge, J. Windig, 2022, Animals : an open access journal from MDPI.

Quantitative genetic variation in an island population of the speckled wood butterfly (Pararge aegeria)

R. Veerkamp, S. Nylin, J. Windig, 2004, Heredity.

Evolutionary genetics of seasonal polyphenism in the map butterfly Araschnia levana (Nymphalidae: Lepidoptera)

J. Windig, P. Lammar, 1999 .

Reaction norms and the genetic basis of phenotypic plasticity in the wing pattern of the butterfly Bicyclus anynana

J. Windig, 1994 .

Trends in genome-wide and region-specific genetic diversity in the Dutch-Flemish Holstein–Friesian breeding program from 1986 to 2015

R. Veerkamp, J. Windig, P. Bijma, 2018, Genetics Selection Evolution.

Are peripheral populations special? Congruent patterns in two butterfly species

N. Ryrholm, T. Tammaru, S. Nylin, 2009 .

Inbreeding depression due to recent and ancient inbreeding in Dutch Holstein–Friesian dairy cattle

R. Veerkamp, J. Windig, P. Bijma, 2019, Genetics Selection Evolution.

Whole-genome sequence data uncover loss of genetic diversity due to selection

M. Calus, J. Windig, S. Eynard, 2016, Genetics Selection Evolution.

The effect of rare alleles on estimated genomic relationships from whole genome sequence data

M. Calus, J. Windig, G. Leroy, 2015, BMC Genetics.

An artificial diet for butterflies, including Bicyclus species, and its effect on development period, weight and wing pattern

P. Brakefield, J. Windig, G. Holloway, 1991, The Journal of Research on the Lepidoptera.

The calculation and significance testing of genetic correlations across environments

J. Windig, 1997 .

Development of a genetic tool for determining breed purity of cattle

I. Hulsegge, J. Windig, S. Hiemstra, 2019, Livestock Science.

Modelling of strategies for genetic control of scrapie in sheep: The importance of population structure

F. V. van Zijderveld, J. Windig, A. Bossers, 2018, PloS one.

Genetic resistance to transmissible spongiform encephalopathies (TSE) in goats

N. Speybroeck, B. Nørrung, J. Langeveld, 2017, EFSA journal. European Food Safety Authority.

Breeding for polledness in Holstein cattle

R. Veerkamp, J. Windig, R. Hoving-Bolink, 2015 .

Chapter 7. Dog breeds: towards genomic management of populations with a high incidence of genetic defects

J. Windig, T. Lewis, 2017 .

Genetic parameters for androstenone, skatole, indole, and human nose scores as measures of boar taint and their relationship with finishing traits.

E. Knol, J. Windig, H. Mulder, 2012, Journal of animal science.

Adaptive wing asymmetry in males of the speckled wood butterfly (Pararge aegeria)?

S. Nylin, J. Windig, 1999, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Seasonal phenotypic variation in the speckled wood butterfly (Pararge aegeria L.): patterns in and relationships between wing characters

H. Dyck, E. Matthysen, A. Dhondt, 1997 .

Quantification of Lepidoptera wing patterns using an image analyzer

J. Windig, 1991, The Journal of Research on the Lepidoptera.

Genetics of host‐plant preference in the comma butterfly Polygonia c‐album (Nymphalidae), and evolutionary implications

A. Bergström, S. Nylin, N. Janz, 2005 .

Genetic correlations between milk production and health and fertility depending on herd environment.

M P L Calus, R F Veerkamp, B Beerda, 2006, Journal of dairy science.

Effects of incomplete pedigree on genetic management of the Dutch Landrace goat.

J. Windig, S. Mucha, 2009, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Integration of epidemiology into the genetic analysis of mastitis in Swedish Holstein.

J. Urioste, J. Windig, E. Strandberg, 2013, Journal of dairy science.

Combining somatic cell count traits for optimal selection against mastitis.

R. Veerkamp, J. Windig, G. de Jong, 2010, Journal of dairy science.

Dairy cow health and the effects of genetic merit for milk production, management and interactions between these: udder health parameters

M. Calus, R. Veerkamp, J. Windig, 2006 .

Value of the Dutch Holstein Friesian germplasm collection to increase genetic variability and improve genetic merit.

R. Veerkamp, J. Windig, P. Bijma, 2018, Journal of dairy science.

Opportunities of Genomics for the Use of Semen Cryo-Conserved in Gene Banks

J. Windig, J. Oldenbroek, 2022, Frontiers in Genetics.

The Use of Whole Genome Sequence Data to Estimate Genetic Relationships Including Rare Alleles Information

M. Calus, J. Windig, G. Leroy, 2014 .

Genetic correlations and reaction norms in wing pattern of the tropical butterfly Bicyclus anynana

J. Windig, 1994, Heredity.

Selection of SNP from 50K and 777K arrays to predict breed of origin in cattle.

M. Calus, J. Windig, B. Hulsegge, 2013, Journal of animal science.

Seasonal polyphenism in the wild: survey of wing patterns in five species of Bicyclus butterflies in Malawi

P. Brakefield, J. Windig, John Wilson, 1994 .

Genetics of host plant preference in the comma butterfly and its evolutionary implications

A. Bergström, S. Nylin, N. Janz, 2005 .

Inbreeding depression across the genome of Dutch Holstein Friesian dairy cattle

R. Veerkamp, J. Windig, P. Bijma, 2020, Genetics, selection, evolution : GSE.

Estimating genetic diversity across the neutral genome with the use of dense marker maps

M. Calus, J. Windig, P. Bijma, 2010, Genetics Selection Evolution.

Genetic improvement of canine hip dysplasia through sire selection across countries.

Å. Viklund, D. Laloë, J. Windig, 2019, Veterinary journal.

Genetic management of Dutch golden retriever dogs with a simulation tool.

J. Windig, K. Oldenbroek, 2015, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Retriever and Pointer: Software to Evaluate Inbreeding and Genetic Management in Captive Populations

I. Hulsegge, J. Windig, 2021, Animals : an open access journal from MDPI.

Limits to genetic rescue by outcross in pedigree dogs

J. Windig, H. P. Doekes, 2018, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Genomics of a revived breed: Case study of the Belgian campine cattle

J. Windig, B. Hulsegge, L. François, 2017, PloS one.

Effects of genotype by environment interactions on milk yield, energy balance, and protein balance.

R. Veerkamp, J. Windig, L. Šebek, 2007, Journal of dairy science.

Genomic prediction based on data from three layer lines: a comparison between linear methods

M. Calus, J. Windig, J. ten Napel, 2014, Genetics Selection Evolution.

Relationship between milk progesterone profiles and genetic merit for milk production, milking frequency, and feeding regimen in dairy cattle.

R. Veerkamp, J. Windig, B. Beerda, 2008, Journal of dairy science.

Perspectives of genomics for genetic conservation of livestock

J. Windig, K. A. Engelsma, 2010, Conservation Genetics.

Intensity of Longitarsus jacobaeae Herbivory and Mortality of Senecio jacobaea

J. Windig, 1993 .

Effects of the number of markers per haplotype and clustering of haplotypes on the accuracy of QTL mapping and prediction of genomic breeding values

C. Schrooten, M. Calus, R. Veerkamp, 2009, Genetics Selection Evolution.

Researchgenetic diversity across the neutral genome with the use of dense marker maps

M. Calus, J. Windig, P. Bijma, 2010 .

Prediction of the reliability of genomic breeding values for crossbred performance

M. Calus, J. Windig, J. Vandenplas, 2017, Genetics Selection Evolution.

Reducing inbreeding rates with a breeding circle: Theory and practice in Veluws Heideschaap

J. Windig, J. Oldenbroek, Marjolein J W Verweij, 2018, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Genetics and Mechanics of Plasticity

J. Windig, G. Jong, C. D. Kovel, 2004 .

An effective rotational mating scheme for inbreeding reduction in captive populations illustrated by the rare sheep breed Kempisch Heideschaap.

J. Windig, L. Kaal, 2008, Animal : an international journal of animal bioscience.

The impact of using old germplasm on genetic merit and diversity—A cattle breed case study

M. Calus, I. Hulsegge, J. Windig, 2018, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Dehorning of cattle in the EU Member States: A quantitative survey of the current practices

I. Veissier, U. Knierim, A. Dockès, 2015 .

Introduction to the special issue on alternatives for cattle dehorning

J. Windig, G. Cozzi, I. Vessier, 2015 .

Genetic diversity within and relationships among Dutch horse populations

W. Back, M. Bosse, S. Eriksson, 2018 .

Genetics of fluctuating asymmetry in pupal traits of the Speckled Wood butterfly (Pararge aegeria)

S. Nylin, J. Windig, 2002, Heredity.

Evolutionary genetics of fluctuating asymmetry in the peacock butterfly(Inachis io)

J. Windig, 1998, Heredity.

Seasonal Polyphenism in Bicyclus Safitza: a Continuous Reaction Norm

J. Windig, 1991 .

Conservation priorities for the different lines of Dutch Red and White Friesian cattle change when relationships with other breeds are taken into account

M. Calus, J. Windig, B. Hulsegge, 2017, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.

Genetic relationships among mastitis and alternative somatic cell count traits in the first 3 lactations of Swedish Holsteins.

J. Urioste, J. Windig, J. Franzén, 2012, Journal of dairy science.