M. Graham

发表

Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response

Rex T. Nelson, J. Grimwood, J. Schmutz, 2009, BMC Genomics.

RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

Rex T. Nelson, D. Grant, S. Cannon, 2010, BMC Plant Biology.

Deconstructing the genetic architecture of iron deficiency chlorosis in soybean using genome-wide approaches

Ashutosh Kumar Singh, Adrienne N. Moran Lauter, Asheesh K Singh, 2020, BMC Plant Biology.

Phosphorus Stress in Common Bean: Root Transcript and Metabolic Responses1[W][OA]

Hank C Wu, C. Town, Tomasz Czechowski, 2007, Plant Physiology.

Computational Identification and Characterization of Novel Genes from Legumes1[w]

Kathryn A. VandenBosch, Steven B. Cannon, Michelle A. Graham, 2004, Plant Physiology.

Bioinformatic Resources for Soybean Genetic and Genomic Research

Rex T. Nelson, D. Grant, R. Shoemaker, 2008 .

Gene expression patterns are correlated with genomic and genic structure in soybean.

Rex T. Nelson, D. Grant, S. Cannon, 2011, Genome.

Replication protein A subunit 3 and the iron efficiency response in soybean.

R. Shoemaker, T. Yin, Jamie A. O’Rourke, 2014, Plant, cell & environment.

Biphasic Gene Expression Changes Elicited by Phakopsora pachyrhizi in Soybean Correlate with Fungal Penetration and Haustoria Formation1[W][OA]

D. Nettleton, M. Graham, T. Baum, 2011, Plant Physiology.

Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress

S. Cannon, N. Weeks, A. Bharti, 2014, BMC Genomics.

Soybean Homologs of MPK4 Negatively Regulate Defense Responses and Positively Regulate Growth and Development1[W][OA]

D. Nettleton, M. Graham, S. Whitham, 2011, Plant Physiology.

Examining Short-Term Responses to a Long-Term Problem: RNA-Seq Analyses of Iron Deficiency Chlorosis Tolerant Soybean

Jamie A. O’Rourke, M. Graham, Lindsay Rutter, 2020, International journal of molecular sciences.

Organization, expression and evolution of a disease resistance gene cluster in soybean.

R. Shoemaker, M. Graham, L. Marek, 2002, Genetics.

Identification of Candidate Genes for a Major Quantitative Disease Resistance Locus From Soybean PI 427105B for Resistance to Phytophthora sojae

A. Dorrance, M. Graham, L. McHale, 2022, Frontiers in Plant Science.

Sequence Level Analysis of Recently Duplicated Regions in Soybean [Glycine max (L.) Merr.] Genome

R. Shoemaker, Suk-Ha Lee, M. Graham, 2008, DNA research : an international journal for rapid publication of reports on genes and genomes.

Transcriptome analyses and virus induced gene silencing identify genes in the Rpp4-mediated Asian soybean rust resistance pathway.

D. Nettleton, R. Shoemaker, K. Pedley, 2013, Functional plant biology : FPB.

Gaining insight into soybean defense responses using functional genomics approaches.

K. Pedley, M. Graham, S. Whitham, 2015, Briefings in functional genomics.

Identification of Genes that Mediate Protection against Soybean Pathogens

M. Graham, M. Graham, 2012 .

Advances on molecular studies of the interaction soybean - Asian rust

A. Borém, M. Graham, R. Abdelnoor, 2012 .

Sequencing and Analysis of Common Bean ESTs. Building a Foundation for Functional Genomics 1[w]

M. Blair, C. Vance, M. Graham, 2005 .

Computational Identification of Legume-Specific Genes

S. Cannon, K. Silverstein, M. Graham, 2005 .

Identification and Analyses of Candidate Genes for Rpp4-Mediated Resistance to Asian Soybean Rust in Soybean1[W][OA]

R. Shoemaker, K. Pedley, M. Graham, 2009, Plant Physiology.

Recent Advances in Legume-Microbe Interactions: Recognition, Defense Response, and Symbiosis from a Genomic Perspective1

M. Graham, D. Samac, M. Graham, 2007, Plant Physiology.

Antimicrobial properties of mucus from the brown garden snail Helix aspersa

M. Graham, S. J. Pitt, P. Taylor-Harris, 2015, British journal of biomedical science.

Virus-Induced Gene Silencing and Transient Gene Expression in Soybean (Glycine max) Using Bean Pod Mottle Virus Infectious Clones.

Jamie A. O’Rourke, M. Graham, S. Whitham, 2016, Current protocols in plant biology.

Update on Microbial Interactions and Plant Defense Recent Advances in Legume-Microbe Interactions : Recognition , Defense Response , and Symbiosis from a Genomic Perspective 1

M. Graham, D. Samac, M. Graham, 2007 .

Dynamic gene expression changes in response to micronutrient, macronutrient, and multiple stress exposures in soybean

Jamie A. O’Rourke, M. Graham, Chantal E. McCabe, 2019, Functional & Integrative Genomics.

Using RNA-seq to characterize responses to 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus)

Jamie A. O’Rourke, M. Graham, M. Owen, 2019, BMC Plant Biology.

Transcriptome response of Lolium arundinaceum to its fungal endophyte Epichloë coenophiala.

C. Schardl, M. Graham, D. Boykin, 2017, The New phytologist.

Day Temperature Influences the Male-Sterile Locus ms9 in Soybean

M. Graham, R. Palmer, S. Cianzio, 2012 .

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean

S. Cannon, R. Shoemaker, Bindu Joseph, 2010, BMC Plant Biology.

Identification of candidate genes involved in early iron deficiency chlorosis signaling in soybean (Glycine max) roots and leaves

Adrienne N. Moran Lauter, R. Shoemaker, T. Yin, 2014, BMC Genomics.

Gene Expression Responses to Sequential Nutrient Deficiency Stresses in Soybean

Jamie A. O’Rourke, M. Graham, 2021, International journal of molecular sciences.

Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants.

Hank C Wu, Beverly A. Underwood, C. Town, 2007, The Plant journal : for cell and molecular biology.

Genome Organization of More Than 300 Defensin-Like Genes in Arabidopsis1[w]

K. Silverstein, M. Graham, K. VandenBosch, 2005, Plant Physiology.

Genome Analysis Genome Organization of More Than 300 Defensin-Like Genes in Arabidopsis 1 [ w ]

K. Silverstein, M. Graham, K. VandenBosch, 2005 .

Retrotransposons within Syntenic Regions between Soybean and Medicago truncatula and Their Contribution to Local Genome Evolution

R. Shoemaker, Bindu Joseph, J. Schlueter, 2009 .

Distinct biphasic mRNA changes in response to Asian soybean rust infection.

D. Nettleton, M. Graham, T. Baum, 2007, Molecular plant-microbe interactions : MPMI.

Interaction between Rag genes results in a unique synergistic transcriptional response that enhances soybean resistance to soybean aphids

Asheesh K. Singh, M. Graham, G. C. Macintosh, 2021, BMC Genomics.

Characterizing short and long term iron stress responses in iron deficiency tolerant and susceptible soybean (Glycine max L. Merr.)

Michael D. Gonzales, Jamie A. O’Rourke, M. Graham, 2021 .

Isolation of acetolactate synthase homologs in common sunflower

M. Graham, M. Owen, A. D. White, 2003, Weed Science.

The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies

Jun Li, X. Dai, P. Zhao, 2015, BMC Genomics.

Soybean Functional Genomics: Bridging the Genotype-to-Phenotype Gap

Jamie A. O’Rourke, M. Graham, S. Whitham, 2017 .

A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar

J. Schmutz, S. Jackson, R. Stupar, 2013, Frontiers in Plant Science.

Recruitment of Novel Calcium-Binding Proteins for Root Nodule Symbiosis in Medicago truncatula1[W][OA]

S. Ivashuta, C. Vance, M. Graham, 2006, Plant Physiology.

Comparing Early Transcriptomic Responses of 18 Soybean (Glycine max) Genotypes to Iron Stress

Asheesh K. Singh, Jamie A. O’Rourke, M. Graham, 2021, International journal of molecular sciences.

Organization and expression of a resistance gene cluster in soybean

M. Graham, M. Graham, 2001 .

Sequencing and Analysis of Common Bean ESTs. Building a Foundation for Functional Genomics1[w]

Miguel Lara, Arturo Medrano-Soto, M. Blair, 2005, Plant Physiology.

The haustorial transcriptomes of Uromyces appendiculatus and Phakopsora pachyrhizi and their candidate effector families.

B. Cooper, M. Duke, K. Mendgen, 2014, Molecular plant pathology.

Defensin-like Genes : Genomic Perspectives on a Diverse Superfamily in Plants

K. Silverstein, M. Graham, K. VandenBosch, 2008 .

The MAPK Kinase Kinase GmMEKK1 Regulates Cell Death and Defense Responses1[OPEN]

D. Ren, Chi Zhang, M. Graham, 2018, Plant Physiology.

Soybean Homologs of MPK4 Negatively Regulate Defense Responses and Positively Regulate Growth and Development1[W][OA]

D. Nettleton, M. Graham, S. Whitham, 2011, Plant Physiology.

Defensin gene family in Medicago truncatula: structure, expression and induction by signal molecules

D. Shah, M. J. Harrison, M. Graham, 2005, Plant Molecular Biology.

Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines

Michael A Grusak, R. Shoemaker, D. Charlson, 2007, BMC Genomics.

Identification of candidate phosphorus stress induced genes in Phaseolus vulgaris through clustering analysis across several plant species.

C. Vance, M. Graham, G. Hernández, 2006, Functional plant biology : FPB.

Molecular Mapping of the Mutant fap4(A24) Allele for Elevated Palmitate Concentration in Soybean

R. Shoemaker, W. Fehr, M. Graham, 2013 .

Inheritance and Molecular Mapping of an Allele Providing Resistance to a Cowpea Mild Mottle‐Like Virus in Soybean

W. Fehr, M. Graham, Ryan C. Brace, 2012 .

Recovering from iron deficiency chlorosis in near-isogenic soybeans: a microarray study.

R. Shoemaker, Jamie A. O’Rourke, M. Graham, 2007, Plant physiology and biochemistry : PPB.

New tools for characterizing early brown stem rot disease resistance signaling in soybean

M. Graham, Chantal E. McCabe, M. Graham, 2020, The plant genome.

PCR Sampling of disease resistance-like sequences from a disease resistance gene cluster in soybean

R. Shoemaker, M. Graham, L. Marek, 2002, Theoretical and Applied Genetics.

Dissection of canopy layer-specific genetic control of leaf angle in Sorghum bicolor by RNA sequencing

Maria G. Salas-Fernandez, P. Liu, M. Graham, 2022, BMC genomics.

Deconstructing the genetic architecture of iron deficiency chlorosis in soybean using genome-wide approaches

Ashutosh Kumar Singh, Adrienne N. Moran Lauter, Arti Singh, 2020, BMC Plant Biology.

Mining Fiskeby III and Mandarin (Ottawa) Expression Profiles to Understand Iron Stress Tolerant Responses in Soybean

R. Stupar, Jamie A. O’Rourke, M. Graham, 2021, International journal of molecular sciences.

Novel paralogous gene families with potential function in legume nodules and seeds.

K. Silverstein, M. Graham, K. VandenBosch, 2006, Current opinion in plant biology.

A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database

Wei Huang, Steven B. Cannon, Rex T. Nelson, 2020, Nucleic Acids Res..

Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2.

A. Pandey, O. Zabotina, K. Pedley, 2011, Molecular plant-microbe interactions : MPMI.

ggenealogy: An R Package for Visualizing Genealogical Data

Susan VanderPlas, Dianne Cook, Lindsay Rutter, 2019, Journal of Statistical Software.

Rpp1 Encodes a ULP1-NBS-LRR Protein That Controls Immunity to Phakopsora pachyrhizi in Soybean.

A. Pandey, K. Pedley, M. Graham, 2019, Molecular plant-microbe interactions : MPMI.

Leveraging RNA-Seq to Characterize Resistance to Brown Stem Rot and the Rbs3 Locus in Soybean.

Jamie A. O’Rourke, M. Graham, S. Cianzio, 2018, Molecular plant-microbe interactions : MPMI.

Visualization methods for differential expression analysis

Adrienne N. Moran Lauter, M. Graham, Lindsay Rutter, 2019, BMC Bioinformatics.

Genome-wide approaches delineate the additive, epistatic, and pleiotropic nature of variants controlling fatty acid composition in peanut (Arachis hypogaea L.)

Ethalinda K. S. Cannon, S. Cannon, P. Ozias‐Akins, 2021, bioRxiv.

Genotypic Characterization of the U.S. Peanut Core Collection

Ethalinda K. S. Cannon, S. Cannon, David Fernández-Baca, 2020, bioRxiv.