Shishir P. S. Chundawat

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An integrated paradigm for cellulosic biorefineries: utilization of lignocellulosic biomass as self-sufficient feedstocks for fuel, food precursors and saccharolytic enzyme production†

Venkatesh Balan, B. Dale, A. D. Jones, 2012 .

Effect of particle size based separation of milled corn stover on AFEX pretreatment and enzymatic digestibility

B. Dale, Shishir P. S. Chundawat, B. Venkatesh, 2007, Biotechnology and bioengineering.

Designer synthetic media for studying microbial-catalyzed biofuel production

Venkatesh Balan, B. Dale, Mingjie Jin, 2015, Biotechnology for Biofuels.

Biochemical and thermochemical conversion of switchgrass to biofuels

Bryan Bals, Bruce E. Dale, Mingjie Jin, 2012 .

Reduced type‐A carbohydrate‐binding module interactions to cellulose I leads to improved endocellulase activity

Shishir P. S. Chundawat, J. Yarbrough, Bhargava Nemmaru, 2020, Biotechnology and bioengineering.

Linking Plant Biology and Pretreatment: Understanding the Structure and Organization of the Plant Cell Wall and Interactions with Cellulosic Biofuel Production

B. Dale, D. Hodge, R. Ong, 2014 .

Lignin triggers irreversible cellulase loss during pretreated lignocellulosic biomass saccharification

Bruce E Dale, Timothy A. Whitehead, Timothy A Whitehead, 2014, Biotechnology for Biofuels.

Insights into plant cell wall structure, architecture, and integrity using glycome profiling of native and AFEXTM-pre-treated biomass

Bruce E. Dale, Michael G. Hahn, B. Dale, 2015, Journal of experimental botany.

Recent advances on ammonia-based pretreatments of lignocellulosic biomass.

Qianjun Shao, Shishir P. S. Chundawat, Chao Zhao, 2019, Bioresource technology.

Overview to Ammonia Pretreatments for Lignocellulosic Biorefineries

Venkatesh Balan, B. Dale, Shishir P. S. Chundawat, 2018 .

An Integrated Process Analytical Platform for Automated Monitoring of Monoclonal Antibody N-linked Glycosylation

Shishir P. S. Chundawat, Aron Gyorgypal, 2021, bioRxiv.

Deconstruction of lignocellulosic biomass to fuels and chemicals.

Bruce E Dale, Gregg T Beckham, Michael E Himmel, 2011, Annual review of chemical and biomolecular engineering.

Ammonia Fiber Expansion (AFEX) Pretreatment of Lignocellulosic Biomass.

Venkatesh Balan, B. Dale, T. Campbell, 2020, Journal of visualized experiments : JoVE.

Probing the nature of AFEX-pretreated corn stover derived decomposition products that inhibit cellulase activity.

Venkatesh Balan, B. Dale, A. D. Jones, 2014, Bioresource technology.

Primer on Ammonia Fiber Expansion Pretreatment

Pragnya L. Eranki, Rebecca J. Garlock, Venkatesh Balan, 2013 .

Guayule as a feedstock for lignocellulosic biorefineries using ammonia fiber expansion (AFEX) pretreatment

Venkatesh Balan, B. Dale, Shishir P. S. Chundawat, 2012 .

Rapid quantification of major reaction products formed during thermochemical pretreatment of lignocellulosic biomass using GC-MS.

Venkatesh Balan, B. Dale, A. D. Jones, 2011, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

Proteomics-based compositional analysis of complex cellulase-hemicellulase mixtures.

Venkatesh Balan, B. Dale, M. Lipton, 2011, Journal of proteome research.

Strategy for Identification of Novel Fungal and Bacterial Glycosyl Hydrolase Hybrid Mixtures that can Efficiently Saccharify Pretreated Lignocellulosic Biomass

Venkatesh Balan, B. Dale, Shishir P. S. Chundawat, 2010, BioEnergy Research.

Carbohydrate binding domains facilitate efficient oligosaccharides synthesis by enhancing mutant catalytic domain transglycosylation activity

Shishir P. S. Chundawat, S. Pingali, Chandra Kanth Bandi, 2020, bioRxiv.

Carbohydrate‐binding domains facilitate efficient oligosaccharides synthesis by enhancing mutant catalytic domain transglycosylation activity

Shishir P. S. Chundawat, S. Pingali, Chandra Kanth Bandi, 2020, Biotechnology and bioengineering.

Comparative analysis of key technologies for cellulosic ethanol production from Brazilian sugarcane bagasse at a commercial scale

M. Meireles, A. Chandel, M. Puri, 2019, Biofuels, Bioproducts and Biorefining.

Profiling of Soluble Neutral Oligosaccharides from Treated Biomass using Solid Phase Extraction and Liquid Chromatography-Multiplexed Collision Induced Dissociation-Mass Spectrometry

Venkatesh Balan, A. D. Jones, Shishir P. S. Chundawat, 2018 .

Profiling of soluble neutral oligosaccharides from treated biomass using solid phase extraction and LC-TOF MS.

Venkatesh Balan, B. Dale, A. D. Jones, 2013, Carbohydrate polymers.

Carbohydrate-Active enZyme (CAZyme) enabled glycoengineering for a sweeter future.

Shishir P. S. Chundawat, Chandra Kanth Bandi, Ayushi Agrawal, 2020, Current opinion in biotechnology.

Profiling of diferulates (plant cell wall cross-linkers) using ultrahigh-performance liquid chromatography-tandem mass spectrometry.

Venkatesh Balan, B. Dale, A. D. Jones, 2013, The Analyst.

Cellobiohydrolase 1 from Trichoderma reesei degrades cellulose in single cellobiose steps

Shishir P. S. Chundawat, S. Sreelatha, M. Lang, 2015, Nature Communications.

Synthetic promoter based azide biosensor toolkit to advance chemical-biology

Kyle S. Skalenko, Shishir P. S. Chundawat, Ayushi Agrawal, 2020, bioRxiv.

Multifaceted characterization of cell wall decomposition products formed during ammonia fiber expansion (AFEX) and dilute acid based pretreatments.

Bruce E Dale, Leonardo da Costa Sousa, Shishir P S Chundawat, 2010, Bioresource technology.

Restructuring the crystalline cellulose hydrogen bond network enhances its depolymerization rate.

G. Phillips, Venkatesh Balan, B. Dale, 2011, Journal of the American Chemical Society.

Lignocellulosic biomass pretreatment using AFEX.

Venkatesh Balan, B. Dale, B. Bals, 2009, Methods in molecular biology.

Click-chemistry enabled directed evolution of glycosynthases for bespoke glycans synthesis

Shishir P. S. Chundawat, Ayushi Agrawal, Tucker Burgin, 2020, bioRxiv.

Saccharification of thermochemically pretreated cellulosic biomass using native and engineered cellulosomal enzyme systems

J. Mielenz, B. Dale, J. Trent, 2016 .

Next-generation ammonia pretreatment enhances cellulosic biofuel production

C. Wyman, Venkatesh Balan, B. Dale, 2016 .

A comparative study of ethanol production using dilute acid, ionic liquid and AFEX™ pretreated corn stover

Seema Singh, Charles E Wyman, Blake Simmons, 2014, Biotechnology for Biofuels.

Influence of physico-chemical changes on enzymatic digestibility of ionic liquid and AFEX pretreated corn stover.

Venkatesh Balan, B. Dale, B. Simmons, 2011, Bioresource technology.

Hemicellulases and auxiliary enzymes for improved conversion of lignocellulosic biomass to monosaccharides

Venkatesh Balan, B. Dale, D. Mead, 2011, Biotechnology for biofuels.

Lawrence Berkeley National Laboratory Recent Work Title A comparative study of ethanol production using dilute acid , ionic liquid and AFEX TM pretreated corn

C. Wyman, Venkatesh Balan, B. Dale, 2014 .

Thermochemical pretreatment of lignocellulosic biomass

B. Dale, Shishir P. S. Chundawat, L. Sousa, 2010 .

'Cradle-to-grave' assessment of existing lignocellulose pretreatment technologies.

Bruce E Dale, Leonardo da Costa Sousa, Shishir P S Chundawat, 2009, Current opinion in biotechnology.

Mixture optimization of six core glycosyl hydrolases for maximizing saccharification of ammonia fiber expansion (AFEX) pretreated corn stover.

Bruce E Dale, Shishir P S Chundawat, Venkatesh Balan, 2010, Bioresource technology.

Effect of Ammonia Fiber Expansion (AFEX) and Silane Treatments of Corncob Granules on the Properties of Renewable Resource Based Biocomposites

Venkatesh Balan, B. Dale, M. Misra, 2007 .

Enzymatic digestibility and pretreatment degradation products of AFEX‐treated hardwoods (Populus nigra)

Venkatesh Balan, Venkatesh Balan, B. Dale, 2009, Biotechnology progress.

Mushroom spent straw: a potential substrate for an ethanol-based biorefinery

Venkatesh Balan, B. Dale, A. D. Jones, 2008, Journal of Industrial Microbiology & Biotechnology.

Engineered Regulon to Enable Autonomous Azide Ion Biosensing, Recombinant Protein Production, and in Vivo Glycoengineering.

Kyle S. Skalenko, Shishir P. S. Chundawat, Ayushi Agrawal, 2021, ACS synthetic biology.

Reduced Type-A Carbohydrate-Binding Module Interactions to Cellulose Leads to Improved Endocellulase Activity

Shishir P. S. Chundawat, J. Yarbrough, Bhargava Nemmaru, 2020, bioRxiv.

The quest for alternatives to microbial cellulase mix production: corn stover-produced heterologous multi-cellulases readily deconstruct lignocellulosic biomass into fermentable sugars

B. Dale, C. Mei, Shishir P. S. Chundawat, 2011 .

In the quest for alternatives to microbial cellulase mix production : Corn stover-produced heterologous multi-cellulases readily deconstruct lignocellulosic biomass into fermentable sugars 1 2 3 4 5 6 7 8 9 10 11 12 13 14

B. Dale, C. Mei, Shishir P. S. Chundawat, 2011 .

Molecular origins of reduced activity and binding commitment of processive cellulases and associated carbohydrate-binding proteins to cellulose III

S. Gnanakaran, Cesar A. López, Shishir P. S. Chundawat, 2021, The Journal of biological chemistry.

Increased enzyme binding to substrate is not necessary for more efficient cellulose hydrolysis

Venkatesh Balan, B. Dale, A. Sethi, 2013, Proceedings of the National Academy of Sciences.

Optimization of Ammonia Fiber Expansion (AFEX) Pretreatment and Enzymatic Hydrolysis of Miscanthus x giganteus to Fermentable Sugars

Bryan Bals, Bruce E Dale, Shishir P S Chundawat, 2007, Biotechnology progress.

Comparison of analytical methods for rapid & reliable quantification of plant-based carbohydrates for the quintessential bioenergy educator

Shishir P. S. Chundawat, 2020, bioRxiv.

Multiscale Characterization of Complex Binding Interactions of Cellulolytic Enzymes Highlights Limitations of Classical Approaches

S. Gnanakaran, Cesar A. López, Shishir P. S. Chundawat, 2020, bioRxiv.

Insights into cellulase‐lignin non‐specific binding revealed by computational redesign of the surface of green fluorescent protein

Timothy A. Whitehead, Matthew D. Smith, D. Sammond, 2017, Biotechnology and bioengineering.

Binding characteristics of Trichoderma reesei cellulases on untreated, ammonia fiber expansion (AFEX), and dilute‐acid pretreated lignocellulosic biomass

Venkatesh Balan, B. Dale, Shishir P. S. Chundawat, 2011, Biotechnology and bioengineering.

High-throughput microplate technique for enzymatic hydrolysis of lignocellulosic biomass.

Bruce E Dale, Shishir P S Chundawat, Venkatesh Balan, 2008, Biotechnology and bioengineering.

Shotgun Approach to Increasing Enzymatic Saccharification Yields of Ammonia Fiber Expansion Pretreated Cellulosic Biomass

Venkatesh Balan, B. Dale, P. Curran, 2017, Front. Energy Res..

Recent Advances in Biologic Therapeutic N-Glycan Preparation Techniques and Analytical Methods for Facilitating Biomanufacturing Automation.

Shishir P. S. Chundawat, Aron Gyorgypal, Erin K. Tiwold, 2023, Journal of pharmaceutical sciences.

Enzymatic digestibility and ethanol fermentability of AFEX-treated starch-rich lignocellulosics such as corn silage and whole corn plant

Venkatesh Balan, B. Dale, B. Bals, 2010, Biotechnology for biofuels.

Conversion of Extracted Oil Cake Fibers into Bioethanol Including DDGS, Canola, Sunflower, Sesame, Soy, and Peanut for Integrated Biodiesel Processing

Venkatesh Balan, B. Dale, Chad A. Rogers, 2009 .

Optimizing harvest of corn stover fractions based on overall sugar yields following ammonia fiber expansion pretreatment and enzymatic hydrolysis

Rebecca J. Garlock, Venkatesh Balan, B. Dale, 2009, Biotechnology for biofuels.

Ionic Liquid–Based Pretreatment of Lignocellulosic Biomass for Bioconversion: a Critical Review

Shishir P. S. Chundawat, Shyamal Roy, 2022, BioEnergy Research.

MARTINI coarse-grained model for crystalline cellulose microfibers.

S Gnanakaran, Siewert J Marrink, Paul Langan, 2015, The journal of physical chemistry. B.

Enzymatic digestibility and pretreatment degradation products of AFEX‐treated hardwoods (Populus nigra)

Venkatesh Balan, B. Dale, C. Chambliss, 2009, Biotechnology progress.

Supporting Information

Venkatesh Balan, B. Dale, Shishir P. S. Chundawat, 2010 .