F. Cheung

发表

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

S. S. Yang, Hansang Jung, J. Lamb, 2011, BMC Genomics.

Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA).

G. Pertea, Joseph White, John Quackenbush, 2002, Genome research.

In silico and in vitro characterization of phospholipase A₂ isoforms from soybean (Glycine max).

Marcos A. Villarreal, E. Leiva, M. Villarreal, 2012, Biochimie.

Sequencing and analysis of the gene-rich space of cowpea

Marta T. Bokowiec, C. Town, M. Timko, 2008, BMC Genomics.

Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes

B. Roe, J. Rogers, S. Humphray, 2006, Proceedings of the National Academy of Sciences.

Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology

B. Haas, G. May, C. Town, 2006, BMC Genomics.

Phosphorus Stress in Common Bean: Root Transcript and Metabolic Responses1[W][OA]

Hank C Wu, C. Town, Tomasz Czechowski, 2007, Plant Physiology.

The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses

Alvaro J. González, Shelby L. Bidwell, B. Roe, 2011, Nature.

A BAC end view of the Musa acuminata genome

C. Town, F. Cheung, 2007, BMC Plant Biology.

The Institute for Genomic Research Osa1 Rice Genome Annotation Database1

Wei Zhu, Foo Cheung, C Robin Buell, 2005, Plant Physiology.

RESOURCERER: a database for annotating and linking microarray resources within and across species

G. Pertea, John Quackenbush, R. Sultana, 2001, Genome Biology.

Spotted cotton oligonucleotide microarrays for gene expression analysis

Ryan A. Rapp, L. Flagel, D. Nettleton, 2007, BMC Genomics.

Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches

C. Buell, J. Leach, C. Lévesque, 2008, BMC Genomics.

A Unique Set of 11,008 Onion Expressed Sequence Tags Reveals Expressed Sequence and Genomic Differences between the Monocot Orders Asparagales and Poales Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.0

J. Prince, C. Town, Y. Zewdie, 2004, The Plant Cell Online.

The Potential Impact of Plant Genomics for Allium Crop Improvement

John McCallum, Christopher D. Town, William J. Martin, 2006 .

Bioinformatics The Institute for Genomic Research Osa 1 Rice Genome Annotation Database 1

B. Haas, R. Sultana, J. Wortman, 2005 .

Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray.

Christopher D Town, John Quackenbush, Foo Cheung, 2003, Genome research.

Erratum: Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes (Proceedings of the National Academy of Sciences of the United States of America (2006) 103 (14959-14964) DOI: 10.1073/pnas.0603228103)

B. Roe, J. Rogers, S. Humphray, 2006 .

Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides.

T. Utterback, T. Feldblyum, C. Town, 2005, Fungal genetics and biology : FG & B.

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

John Quackenbush, Feng Liang, Svetlana Karamycheva, 2003, Bioinform..

Pilot sequencing of onion genomic DNA reveals fragments of transposable elements, low gene densities, and significant gene enrichment after methyl filtration

C. Town, J. Jakše, J. McCallum, 2008, Molecular Genetics and Genomics.

PrP (prion) gene expression in sheep may be modulated by alternative polyadenylation of its messenger RNA.

N. Hunter, W. Goldmann, F. Cheung, 1999, The Journal of general virology.

Global assembly of expressed sequence tags.

F. Cheung, 2012, Methods in molecular biology.

Insights into the Musa genome: Syntenic relationships to rice and between Musa species

B. Haas, J. Leebens-Mack, C. Town, 2008, BMC Genomics.

Comparative sequence and genetic analyses of asparagus BACs reveal no microsynteny with onion or rice

C. Town, C. Jung, J. Jakše, 2006, Theoretical and Applied Genetics.

Comparative Analysis between Homoeologous Genome Segments of Brassica napus and Its Progenitor Species Reveals Extensive Sequence-Level Divergence

A. Paterson, C. Town, M. Trick, 2009 .

A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula

Hank C Wu, M. Stitt, W. Scheible, 2008, Plant Methods.

Databases and Information Integration for the Medicago truncatula Genome and Transcriptome1

Xiaohong Wang, Foo Cheung, Timothy M. Kunau, 2005, Plant Physiology.

The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes

John Quackenbush, Svetlana Karamycheva, Geo Pertea, 2004, Nucleic Acids Res..

The 3' untranslated region of the PrP gene

F. Cheung, 1997 .

Enrichment of Gene-Coding Sequences in Maize by Genome Filtration

J Quackenbush, G. Pertea, J. Bennetzen, 2003, Science.

Comparative Genomics of Brassica oleracea and Arabidopsis thaliana Reveal Gene Loss, Fragmentation, and Dispersal after Polyploidy[W][OA]

B. Haas, J. Crabtree, J. Wortman, 2006, The Plant Cell Online.

Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis

C. Town, P. Zhao, M. Monteros, 2011, BMC Genomics.

Arbuscular mycorrhizal symbiosis is accompanied by local and systemic alterations in gene expression and an increase in disease resistance in the shoots.

C. Town, I. Maldonado-Mendoza, M. J. Harrison, 2007, The Plant journal : for cell and molecular biology.

Comparative genomic analyses in Asparagus.

J. Leebens-Mack, Lena L. Landherr, C. Town, 2005, Genome.

Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton.

S. Sze, C. Town, B. Triplett, 2006, The Plant journal : for cell and molecular biology.

Comparative Analysis between Homoeologous Genome Segments of Brassica napus and Its Progenitor Species Reveals Extensive Sequence-Level Divergence[W][OA]

A. Paterson, C. Town, M. Trick, 2009, The Plant Cell Online.

A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences

P. Hurban, E. Lobenhofer, C. Town, 2009, BMC Plant Biology.

The TIGR Plant Transcript Assemblies database

Wei Zhu, Christopher Town, Kevin L. Childs, 2006, Nucleic Acids Res..

Fresh insights into the Musa genome and its comparison with rice

B. Haas, J. Leebens-Mack, C. Town, 2005 .

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists

Jia Liu, Daniel Lee, John Quackenbush, 2003, Nucleic Acids Res..

Construction, characterization, and preliminary BAC-end sequencing analysis of a bacterial artificial chromosome library of white clover (Trifolium repens L.).

Christopher D Town, Steven B Cannon, Foo Cheung, 2007, Genome.

Analysis of tall fescue ESTs representing different abiotic stresses, tissue types and developmental stages

G. May, C. Town, Chunhong Mao, 2008, BMC Plant Biology.

Abiotic Stress‐Related Expressed Sequence Tags from the Diploid Strawberry Fragaria vesca f. semperflorens

A. Chan, J. Slovin, K. Folta, 2011 .

The TIGR Maize Database

Li Zheng, John Quackenbush, Geo Pertea, 2005, Nucleic Acids Res..

Spotted cotton oligonucleotide microarrays for gene expression analysis

Ryan A. Rapp, Lex E. Flagel, D. Nettleton, 2007 .

Analysis of tall fescue ESTs representing different abiotic stresses, tissue types and developmental stages

G. May, C. Town, Chunhong Mao, 2008, BMC Plant Biology.

A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula

M. Stitt, W. Scheible, C. Town, 2008, Plant Methods.

Sequencing and analysis of the gene-rich space of cowpea

Marta T. Bokowiec, F. Cheung, T. Laudeman, 2008, BMC Genomics.

Analysis of tall fescue ESTs representing different abiotic stresses, tissue types and developmental stages

G. May, C. Town, Chunhong Mao, 2008, BMC Plant Biology.