Guillermo Rodrigo

发表

Genetic Redundancies Enhance Information Transfer in Noisy Regulatory Circuits

Juan F. Poyatos, Guillermo Rodrigo, J. F. Poyatos, 2016, bioRxiv.

Genetic redundancies enhance information transfer in noisy regulatory circuits

Juan F. Poyatos, Guillermo Rodrigo, 2016 .

AutoBioCAD: full biodesign automation of genetic circuits.

Alfonso Jaramillo, Guillermo Rodrigo, G. Rodrigo, 2013, ACS synthetic biology.

Asmparts: assembly of biological model parts

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2007, Systems and Synthetic Biology.

Computational design of proteins with new functions

María Suárez, Alfonso Jaramillo, Guillermo Rodrigo, 2007, BMC Systems Biology.

Perspectives on the automatic design of regulatory systems for synthetic biology

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2012, FEBS letters.

ECOLITASTER: cellular biosensor

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2007, BMC Systems Biology.

Regulatory RNA design through evolutionary computation and strand displacement

Alfonso Jaramillo, Guillermo Rodrigo, William Rostain, 2014, bioRxiv.

Genetdes: automatic design of transcriptional networks

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2007, Bioinform..

Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression

Alfonso Jaramillo, Guillermo Rodrigo, Satya Prakash, 2015 .

Probing the operability regime of an engineered ribocomputing unit in terms of dynamic range maintenance with extracellular changes and time

Guillermo Rodrigo, Roser Montagud-Martínez, Jordi Ventura, 2020, Journal of biological engineering.

Computational Design in Synthetic Biology

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2009 .

Full Design Automation of Multi-State RNA Devices to Program Gene Expression Using Energy-Based Optimization

Alfonso Jaramillo, Guillermo Rodrigo, Thomas E. Landrain, 2013, PLoS Comput. Biol..

Robust dynamical pattern formation from a multifunctional minimal genetic circuit

Santiago F. Elena, Alfonso Jaramillo, Guillermo Rodrigo, 2009, BMC Systems Biology.

Insights about collective decision-making at the genetic level

Guillermo Rodrigo, 2019, Biophysical Reviews.

DESHARKY: automatic design of metabolic pathways for optimal cell growth

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2008, Bioinform..

Computational design of digital and memory biological devices

Alfonso Jaramillo, Guillermo Rodrigo, G. Rodrigo, 2007, Systems and Synthetic Biology.

RiboMaker: computational design of conformation-based riboregulation

Alfonso Jaramillo, Guillermo Rodrigo, G. Rodrigo, 2014, Bioinform..

CRISPR-Mediated Strand Displacement Logic Circuits with Toehold-Free DNA

Guillermo Rodrigo, Roser Montagud-Martínez, María Heras-Hernández, 2021, ACS synthetic biology.

Molecular signatures of silencing suppression degeneracy from a complex RNA virus

Guillermo Rodrigo, José-Antonio Daròs, Silvia Ambrós, 2021, PLoS Comput. Biol..

Empirical model and in vivo characterization of the bacterial response to synthetic gene expression show that ribosome allocation limits growth rate.

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2011, Biotechnology journal.

Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression

Satya Prakash, Alfonso Jaramillo, Guillermo Rodrigo, 2015, bioRxiv.

Describing the structural robustness landscape of bacterial small RNAs

Guillermo Rodrigo, M. Fares, G. Rodrigo, 2012, BMC Evolutionary Biology.

Model-based design of RNA hybridization networks implemented in living cells

Satya Prakash, Alfonso Jaramillo, Guillermo Rodrigo, 2017, Nucleic acids research.

Structural Discrimination of Robustness in Transcriptional Feedforward Loops for Pattern Formation

Santiago F. Elena, Guillermo Rodrigo, S. Elena, 2011, PloS one.

Theoretical and experimental analysis of the forced LacI-AraC oscillator with a minimal gene regulatory model.

Alfonso Jaramillo, Guillermo Rodrigo, Boris Kirov, 2013, Chaos.

Modular model-based design for heterologous bioproduction in bacteria.

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2009, Current opinion in biotechnology.

Computational design and evolution of the oscillatory response under light-dark cycles.

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2008, Biochimie.

Towards the automated engineering of a synthetic genome.

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2009, Molecular bioSystems.

Computational design of synthetic regulatory networks from a genetic library to characterize the designability of dynamical behaviors

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2011, Nucleic acids research.

Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2009, Genome Biology.

Modulation of Intracellular O2 Concentration in Escherichia coli Strains Using Oxygen Consuming Devices.

Paula Tamagnini, Alfonso Jaramillo, Guillermo Rodrigo, 2018, ACS synthetic biology.

Evolutionary mechanisms of circadian clocks

Alfonso Jaramillo, Guillermo Rodrigo, Javier Carrera, 2007, Central European Journal of Biology.