I. Lesur

发表

Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline

Charlie Pauvert, C. Vacher, V. Laval, 2019, Fungal Ecology.

Genome evolution in yeasts

B. Dujon, M. Aigle, M. Bolotin-Fukuhara, 2004, Nature.

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology.

Rafael A. Cañas, M. Claros, N. Fernández-Pozo, 2014, Plant biotechnology journal.

Oak genome reveals facets of long lifespan

Olivier Panaud, Hadi Quesneville, Franck Salin, 2018, Nature Plants.

Genome-wide distribution of genetic diversity and linkage disequilibrium in a mass-selected population of maritime pine

Jeffrey B. Endelman, J. Endelman, M. Bink, 2014, BMC Genomics.

An easy and robust method for isolation and validation of single-nucleotide polymorphic markers from a first Erysiphe alphitoides draft genome

C. Mouden, M. Desprez-Loustau, N. Feau, 2020, Mycological Progress.

High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

J. Gion, P. Label, C. Plomion, 2013, BMC Biology.

High‐density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)

M. Cervera, J. Gion, G. Vendramin, 2016, Molecular ecology resources.

Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

M. Martin-Magniette, F. Bitton, C. Plomion, 2011, BMC Genomics.

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

J. Leplé, C. Plomion, C. Noirot, 2015, Molecular Ecology Resources.

The use and domestication of Theobroma cacao during the mid-Holocene in the upper Amazon

Terry G. Powis, X. Argout, M. Blake, 2018, Nature Ecology & Evolution.

Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.).

J. Aury, K. Labadie, J. Leplé, 2016, Tree physiology.

Genomic landscape of the global oak phylogeny

E. Schulze, J. Cavender-Bares, S. Fitz-Gibbon, 2019, bioRxiv.

The transcriptome of prematurely aging yeast cells is similar to that of telomerase-deficient cells.

I. Lesur, Judith L Campbell, J. Campbell, 2003, Molecular biology of the cell.

Single‐nucleotide polymorphism discovery and validation in high‐density SNP array for genetic analysis in European white oaks

A. Boland, C. Plomion, C. Besse, 2015, Molecular Ecology Resources.

Development of Target Sequence Capture and Estimation of Genomic Relatedness in a Mixed Oak Stand

C. Plomion, E. Chancerel, I. Lesur, 2018, Front. Plant Sci..

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies

Hadi Quesneville, Franck Salin, Karine Labadie, 2016, Molecular ecology resources.

Signatures of local adaptation in candidate genes of oaks (Quercus spp.) with respect to present and future climatic conditions

F. Gugerli, S. Zoller, I. Lesur, 2016, Molecular ecology.

The use and domestication of Theobroma cacao during the mid-Holocene in the upper Amazon

Terry G. Powis, X. Argout, M. Blake, 2018, Nature Ecology & Evolution.

A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genomic libraries

M. Lascoux, G. Vendramin, C. Plomion, 2011, Tree Genetics & Genomes.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

H. Quesneville, J. Aury, Florent Murat, 2015, BMC Genomics.

Genome-wide variation in recombination rate in Eucalyptus

R. Vaillancourt, B. Potts, J. Gion, 2016, BMC Genomics.

How does contemporary selection shape oak phenotypes?

E. Klein, J. Torres-Ruiz, E. Chancerel, 2020, Evolutionary applications.

Gene Expression Profiles Characterize Inflammation Stages in the Acute Lung Injury in Mice

B. Loriod, C. Nguyen, I. Lesur, 2010, PloS one.

Genome‐wide evolutionary response of European oaks during the Anthropocene

J. Aury, M. Lascoux, K. Labadie, 2022, Evolution letters.

Genetic signatures of divergent selection in European beech (Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range

G. Vendramin, S. Oddou-Muratorio, I. Scotti, 2021, bioRxiv.

Chloroplast DNA variation of white oaks in northern Balkans and in the Carpathian Basin

R. Petit, I. Lesur, D. Gömöry, 2002 .

Water stress-associated isolation barriers between two sympatric oak species

J. Aury, K. Labadie, C. Plomion, 2021, bioRxiv.

Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

J. Aury, K. Labadie, T. Moritz, 2023, BMC Plant Biology.

Locally adapted oak populations along an elevation gradient display different molecular strategies to regulate bud phenology

Corinne Da Silva, J. Aury, K. Labadie, 2021, bioRxiv.

Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness

M. Bink, C. Plomion, L. Bouffier, 2016, PloS one.

Genome-wide evolutionary response of European oaks since the Little Ice Age

J. Aury, M. Lascoux, K. Labadie, 2021, bioRxiv.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

H. Quesneville, J. Aury, Florent Murat, 2015, BMC Genomics.

Its all fun guys: a comparison of bioinformatic pipelines for metabarcoding plant and soil fungal communities

Charlie Pauvert, C. Vacher, V. Laval, 2018 .

Genome-wide variation in recombination rate in Eucalyptus

R. Vaillancourt, B. Potts, J. Gion, 2016, BMC Genomics.

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)

Odile Rogier, J. Salse, C. Ambroise, 2023, bioRxiv.

High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

J. Gion, P. Label, C. Plomion, 2013, BMC Biology.

Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

M. Martin-Magniette, F. Bitton, C. Plomion, 2011, BMC Genomics.

Analysis of Bac End Sequences in Oak, a Keystone Forest Tree Species, Providing Insight into the Composition of Its Genome Analysis of Bac End Sequences in Oak, a Keystone Forest Tree Species, Providing Insight into the Composition of Its Genome

M. Martin-Magniette, H. Bergès, I. Lesur, 2022 .

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies

P. Wincker, A. Couloux, V. Barbe, 2016, Molecular ecology resources.

Whole-genome screening for near-diagnostic genetic markers for four western European white oak species identification

I. Lesur, C. Rellstab, Thibault Leroy, 2024, Annals of Forest Science.

Whole-genome screening for near-diagnostic genetic markers for white oak species identification in Europe

I. Lesur, Thibault Leroy, A. Delcamp, 2023, bioRxiv.