A. Bej

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The Purple Sea Urchin Strongylocentrotus purpuratus Demonstrates a Compartmentalization of Gut Bacterial Microbiota, Predictive Functional Attributes, and Taxonomic Co-Occurrence

A. W. Galloway, S. Watts, C. Morrow, 2019, Microorganisms.

Microbial Community Composition and Predicted Functional Attributes of Antarctic Lithobionts Using Targeted Next-Generation Sequencing and Bioinformatics Tools

C. Morrow, Joseph A. Hakim, A. Bej, 2018 .

Amplification of nucleic acids by polymerase chain reaction (PCR) and other methods and their applications.

R. Atlas, A. Bej, M. H. Mahbubani, 1991, Critical reviews in biochemistry and molecular biology.

Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl, tdh and trh.

Daniel D. Jones, D. D. Jones, A. Bej, 1999, Journal of microbiological methods.

Suicidal genetic elements and their use in biological containment of bacteria.

J. Ramos, C. S. Kristensen, S. Molin, 1993, Annual review of microbiology.

Metagenomic Analysis of Microbial Community Compositions and Cold-Responsive Stress Genes in Selected Antarctic Lacustrine and Soil Ecosystems

C. Morrow, Joseph A. Hakim, M. Crowley, 2018, Life.

Acquisition of mitochondrial DNA by a transformation vector for Ustilago violacea.

M. Perlin, A. Bej, 1991, Gene.

The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles.

S. Watts, E. Lefkowitz, C. Morrow, 2016, FEMS microbiology ecology.

Growth, Survival and Characterization of cspA in Salmonella enteritidis Following Cold Shock

Asim K. Bej, John W. Foster, Robert J. Steffan, 1998, Current Microbiology.

Bacterial gene expression at low temperatures

J. Trevors, N. Mojib, L. Overbeek, 2012, Extremophiles.

Response and tolerance of toxigenic Vibro cholerae O1 to cold temperatures

R. Colwell, A. Bej, Mǎdǎlina Mateescu, 2001, Antonie van Leeuwenhoek.

Adaptive Response to Cold Temperatures in Vibrio vulnificus

J. Foster, A. Bej, R. Steffan, 1999, Current Microbiology.

IDENTIFICATION OF THE FUNCTION OF RV0194 IN MYCOBACTERIUM TUBERCULOSIS by RACHEL PHILPOTT MICHAEL NIEDERWEIS, COMMITTEE CHAIR ASIM BEJ

A. Bej, V. Ghanta, R. Philpott, 2009 .

Analysis of aggregative behavior of Pseudomonas sp. 30-3 isolated from Antarctic soil

J. Aislabie, A. Bej, G. Panicker, 2006 .

Multiplex PCR amplification and immobilized capture probes for detection of bacterial pathogens and indicators in water.

R. Atlas, J. Dicesare, A. Bej, 1990, Molecular and cellular probes.

Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: comparison with defined substrate and plating methods for water quality monitoring

R. Atlas, A. Bej, S. McCarty, 1991, Applied and environmental microbiology.

Detection, expression and quantitation of the biodegradative genes in Antarctic microorganisms using PCR

N. Mojib, J. Aislabie, A. Bej, 2010, Antonie van Leeuwenhoek.

CRISPR–Cas System: A new Paradigm for Bacterial Stress Response Through Genome Rearrangement

J. Trevors, J. D. Elsas, Joseph A. Hakim, 2016 .

Bacterial community shift in the coastal Gulf of Mexico salt-marsh sediment microcosm in vitro following exposure to the Mississippi Canyon Block 252 oil (MC252)

R. Donahoe, N. Mojib, A. Bej, 2014, 3 Biotech.

Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)

N. Mojib, A. Bej, Hyunmin Koo, 2014, Antonie van Leeuwenhoek.

Bacterial diversity within five unexplored freshwater lakes interconnected by surface channels in East Antarctic Dronning Maud Land (Schirmacher Oasis) using amplicon pyrosequencing

A. Bej, D. Andersen, A. K. Swain, 2014, Polar Biology.

Bacterial diversity of the rock-water interface in an East Antarctic freshwater ecosystem, Lake Tawani(P)†

A. Bej, D. Andersen, R. Thacker, 2013, Aquatic biosystems.

Molecular cloning of a cDNA encoding putative molt-inhibiting hormone from the blue crab, Callinectes sapidus.

T. Elton, S. Watts, A. Bej, 1995, Biochemical and biophysical research communications.

Trichococcus patagoniensis sp. nov., a facultative anaerobe that grows at -5 degrees C, isolated from penguin guano in Chilean Patagonia.

P. Krader, W. Whitman, E. Pikuta, 2006, International journal of systematic and evolutionary microbiology.

Molecular approaches for environmental monitoring of microorganisms.

G. Sayler, R. Atlas, R. Burlage, 1992, BioTechniques.

A high efficiency transformation system for the basidiomycete Ustilago violacea employing hygromycin resistance and lithium-acetate treatment.

M. Perlin, A. Bej, 1989, Gene.

Real-time PCR quantification of Vibrio parahaemolyticus in oysters using an alternative matrix.

A. Bej, A. DePaola, M. Vickery, 2004, Journal of food protection.

Spirochaeta dissipatitropha sp. nov., an alkaliphilic, obligately anaerobic bacterium, and emended description of the genus Spirochaeta Ehrenberg 1835.

P. Krader, W. Whitman, E. Pikuta, 2009, International journal of systematic and evolutionary microbiology.

Bacterial diversity within five unexplored freshwater lakes interconnected by surface channels in East Antarctic Dronning Maud Land (Schirmacher Oasis) using amplicon pyrosequencing

A. Bej, D. Andersen, A. K. Swain, 2014, Polar Biology.

Adaptive acid tolerance response (ATR) in Aeromonas hydrophila.

J. Foster, A. Bej, K. Karem, 1994, Microbiology.

48 – DETECTING BACTERIAL PATHOGENS IN ENVIRONMENTAL WATER SAMPLES BY USING PCR AND GENE PROBES

R. Atlas, A. Bej, 1990 .

Effect of introducing genetically engineered microorganisms on soil microbial community diversity

R. Atlas, M. Perlin, A. Bej, 1991 .

Detection of Legionella with polymerase chain reaction and gene probe methods.

R. Atlas, J. Dicesare, A. Bej, 1990, Molecular and cellular probes.

Antimycobacterial activity in vitro of pigments isolated from Antarctic bacteria

Asim K. Bej, Nazia Mojib, M. Niederweis, 2010, Antonie van Leeuwenhoek.

Detection of Microbial Pathogens in Shellfish with Multiplex PCR

Daniel D. Jones, A. Bej, A. DePaola, 1998, Current Microbiology.

Recovery of DNA from soils and sediments

R M Atlas, G. Sayler, R. Atlas, 1988, Applied and environmental microbiology.

Characterization of Arthrobacter nicotinovorans HIM, an atrazine-degrading bacterium, from agricultural soil New Zealand.

J. Aislabie, A. Bej, J. Ryburn, 2005, FEMS microbiology ecology.

Polymerase chain reaction-gene probe detection of microorganisms by using filter-concentrated samples

R M Atlas, R. Atlas, J. Dicesare, 1991, Applied and environmental microbiology.

Detection of Salmonella in Shellfish Using SYBR Green™ I-Based Real-Time Multiplexed PCR Assay Targeting invA and spvB

N. Mojib, A. Bej, A. M. Waters, 2013, Food Analytical Methods.

Evaluation of PCR Amplification-based Detection of Heat-killed Escherichia coli and Cell-free DNA in Shellfish

A. Bej, C. Brasher, G. Panicker, 2002 .

Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid

R M Atlas, R. Atlas, J. Dicesare, 1991, Applied and environmental microbiology.

Detection of Giardia in Environmental Waters by Immuno-PCR Amplification Methods

Daniel D. Jones, A. Bej, M. H. Mahbubani, 1998, Current Microbiology.

Detection of Salmonella spp. in Oysters Using Polymerase Chain Reactions (PCR) and Gene Probes

Asim K. Bej, Daniel D. Jones, A. Bej, 1993 .

Differentiation of Giardia duodenalis from other Giardia spp. by using polymerase chain reaction and gene probes

R M Atlas, R. Atlas, M. Perlin, 1992, Journal of clinical microbiology.

Detection of Giardia cysts by using the polymerase chain reaction and distinguishing live from dead cysts

R M Atlas, R. Atlas, M. Perlin, 1991, Applied and environmental microbiology.

Applications of the polymerase chain reaction in environmental microbiology.

A. Bej, M. H. Mahbubani, 1992, PCR methods and applications.

PCR Amplification of DNA Recovered from the Aquatic Environment

A. Bej, 1995 .

Detection of Salmonella spp. in oysters by PCR

R. Atlas, A. Bej, M. H. Mahbubani, 1994, Applied and environmental microbiology.

Rapid Detection of Vibrio vulnificus in Shellfish and Gulf of Mexico Water by Real-Time PCR

A. Bej, G. Panicker, M. L. Myers, 2004, Applied and Environmental Microbiology.

Response of microbial populations to environmental disturbance

R. Atlas, A. Bej, A. Horowitz, 1991, Microbial Ecology.

Detection of Vibrio parahaemolyticus in Shellfish by Use of Multiplexed Real-Time PCR with TaqMan Fluorescent Probes

A. Bej, L. Ward, 2006, Applied and Environmental Microbiology.

Detection of pathogenic bacteria in shellfish using multiplex PCR followed by CovaLink NH microwell plate sandwich hybridization.

A. Bej, Chi-Ying Lee, G. Panicker, 2003, Journal of microbiological methods.

PCR Detection of a Newly Emerged Pandemic Vibrio parahaemolyticus O3:K6 Pathogen in Pure Cultures and Seeded Waters from the Gulf of Mexico

A. Bej, G. Panicker, M. L. Myers, 2003, Applied and Environmental Microbiology.

Multiplex PCR detection of clinical and environmental strains of Vibrio vulnificus in shellfish.

A. Bej, M. Vickery, Gitika Panicker, 2004, Canadian journal of microbiology.

Real-Time PCR Detection of Vibrio vulnificus in Oysters: Comparison of Oligonucleotide Primers and Probes Targeting vvhA

A. Bej, G. Panicker, 2005, Applied and Environmental Microbiology.

Detection of Pathogenic Vibrio spp. in Shellfish by Using Multiplex PCR and DNA Microarrays

D. Call, A. Bej, Melissa J Krug, 2004, Applied and Environmental Microbiology.

Optimization of the arbitrarily-primed polymerase chain reaction (AP-PCR) for intra-species differentiation of Vibrio vulnificus

Daniel D. Jones, A. Bej, R. Steffan, 1998 .

Detection of microbial nucleic acids by polymerase chain reaction in aquatic samples.

G. Kowalchuk, J. D. Elsas, F. J. Bruijn, 2004 .

Detection of viable Legionella pneumophila in water by polymerase chain reaction and gene probe methods

R M Atlas, R. Atlas, A. Bej, 1991, Applied and environmental microbiology.

Detection of coliform bacteria in water by polymerase chain reaction and gene probes

R M Atlas, J DiCesare, R. Atlas, 1990, Applied and environmental microbiology.

Carnobacterium pleistocenium sp. nov., a novel psychrotolerant, facultative anaerobe isolated from permafrost of the Fox Tunnel in Alaska.

Damien Marsic, Jane Tang, Asim Bej, 2005, International journal of systematic and evolutionary microbiology.

Thermococcus thioreducens sp. nov., a novel hyperthermophilic, obligately sulfur-reducing archaeon from a deep-sea hydrothermal vent.

Takashi Itoh, Damien Marsic, Jane Tang, 2007, International journal of systematic and evolutionary microbiology.

Trichococcus patagoniensis sp. nov., a facultative anaerobe that grows at −5 °C, isolated from penguin guano in Chilean Patagonia

Richard B. Hoover, Elena V. Pikuta, Asim K. Bej, 2006 .

Desulfonatronum thiodismutans sp. nov., a novel alkaliphilic, sulfate-reducing bacterium capable of lithoautotrophic growth.

Damien Marsic, William B Whitman, P. Krader, 2003, International journal of systematic and evolutionary microbiology.

Spirochaeta americana sp. nov., a new haloalkaliphilic, obligately anaerobic spirochaete isolated from soda Mono Lake in California.

Damien Marsic, Jane Tang, William B Whitman, 2003, International journal of systematic and evolutionary microbiology.

Tindallia californiensis sp. nov., a new anaerobic, haloalkaliphilic, spore-forming acetogen isolated from Mono Lake in California

Richard B. Hoover, Elena V. Pikuta, Ekaterina N. Detkova, 2003, Extremophiles.

Introduction and maintenance of prokaryotic DNA inUstilago violacea

M. Perlin, A. Bej, R. Jacob, 1990, Journal of Industrial Microbiology.

Effects of desiccation on the ventral nerve cord-neurosecretory system of tropical earthworm,Metaphire peguana (Rosa, 1890)

A. Bej, D. K. Nanda, P. Chaudhuri, 1984 .

Microbial Communities and Their Predicted Metabolic Functions in Growth Laminae of a Unique Large Conical Mat from Lake Untersee, East Antarctica

N. Mojib, Joseph A. Hakim, A. Bej, 2017, Front. Microbiol..

Structure and function of a cold shock domain fold protein, CspD, in Janthinobacterium sp. Ant5-2 from East Antarctica.

Nazia Mojib, N. Mojib, A. Bej, 2011, FEMS microbiology letters.

Occurrence and distribution of capB in Antarctic microorganisms and study of its structure and regulation in the Antarctic biodegradative Pseudomonas sp. 30/3

N. Mojib, J. Aislabie, A. Bej, 2010, Extremophiles.

Multiplexed real-time PCR amplification of tlh, tdh and trh genes in Vibrio parahaemolyticus and its rapid detection in shellfish and Gulf of Mexico water

A. Bej, Amy V. Rizvi, 2010, Antonie van Leeuwenhoek.

Detection of pandemic Vibrio parahaemolyticus O3:K6 serovar in Gulf of Mexico water and shellfish using real-time PCR with Taqman fluorescent probes.

A. Bej, G. Panicker, M. L. Myers, 2006, FEMS microbiology letters.

Metagenomic Analysis of Microbial Cold Stress Proteins in Polar Lacustrine Ecosystems

Joseph A. Hakim, A. Bej, Hyunmin Koo, 2016 .

Comparison of two bioinformatics tools used to characterize the microbial diversity and predictive functional attributes of microbial mats from Lake Obersee, Antarctica.

C. Morrow, Joseph A. Hakim, A. Bej, 2017, Journal of microbiological methods.

Hypothesized Microenvironments for the Origin of Microbial Life on Earth

J. Trevors, J. D. Elsas, A. Bej, 2012 .

Bacterial gene expression at low temperatures

J. Trevors, N. Mojib, L. Overbeek, 2012, Extremophiles.

Cold Adaptation in Antarctic Biodegradative Microorganisms

N. Mojib, A. Bej, 2009 .

Polar Microbiology : The Ecology, Biodiversity and Bioremediation Potential of Microorganisms in Extremely Cold Environments

Ronald M. Atlas, Asim K. Bej, R. Atlas, 2009 .

Diversity and cold adaptation of microorganisms isolated from the Schirmacher Oasis, Antarctica

Richard B. Hoover, Asim K. Bej, Nazia Mojib, 2008, Optical Engineering + Applications.

Adaptive response to cold temperatures and characterization of cspA in Salmonella typhimurium LT2

J. Foster, A. Bej, R. Steffan, 2004, Antonie van Leeuwenhoek.

Cold tolerance of Pseudomonas sp. 30-3 isolated from oil-contaminated soil, Antarctica

J. Aislabie, D. Saul, A. Bej, 2001, Polar Biology.

Cold-tolerant alkane-degrading Rhodococcus species from Antarctica

J. Aislabie, D. Saul, A. Bej, 2000, Polar Biology.

Model suicide vector for containment of genetically engineered microorganisms

R M Atlas, R. Atlas, M. Perlin, 1988, Applied and environmental microbiology.

Draft Genome Sequence of Pseudomonas sp. Strain Ant30-3, a Psychrotolerant Bacterium with Biodegradative Attribute Isolated from Antarctica

J. Aislabie, M. Crowley, A. Bej, 2014, Genome Announcements.

UV and cold tolerance of a pigment-producing Antarctic Janthinobacterium sp. Ant5-2

N. Mojib, A. Bej, D. Andersen, 2013, Extremophiles.

Microbial degradation of quinoline and methylquinolines

S. Rothenburger, R. Atlas, J. Aislabie, 1990, Applied and environmental microbiology.

Molecular based methods for the detection of microbial pathogens in the environment.

A. Bej, Asim K Bej, 2003, Journal of microbiological methods.

Antimicrobial activity of PVP from an Antarctic bacterium, Janthinobacterium sp. Ant5-2, on multi-drug and methicillin resistant Staphylococcus aureus

Simon C Watkins, N. Mojib, A. Bej, 2012, Natural Products and Bioprospecting.

Maintenance and killing efficiency of conditional lethal constructs inPseudomonas putida

R. M. Atlas, S. Molin, R. Atlas, 1992, Journal of Industrial Microbiology.

Detection of bacterial mRNA using polymerase chain reaction.

R M Atlas, R. Atlas, J. Dicesare, 1991, BioTechniques.

An abundance of Epsilonproteobacteria revealed in the gut microbiome of the laboratory cultured sea urchin, Lytechinus variegatus

S. Watts, E. Lefkowitz, C. Morrow, 2015, Front. Microbiol..

THE BACTERIAL COMMUNITY OF A FRESHWATER SPONGE , RADIOSPONGILLA CEREBELLATA : A COMPARISON OF TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISMS ( T-RFLP ) AND 16 S RRNA CLONE LIBRARY METHODS by

A. Bej, R. Thacker, J. Olson, 2010 .

Microbial Composition and Genes for Key Metabolic Attributes in the Gut Digesta of Sea Urchins Lytechinus variegatus and Strongylocentrotus purpuratus Using Shotgun Metagenomics

S. Watts, C. Morrow, Joseph A. Hakim, 2021, Current issues in molecular biology.

Oyster-to-oyster variability in levels of Vibrio parahaemolyticus.

A. Bej, A. DePaola, J. Bowers, 2003, Journal of food protection.

High-throughput amplicon sequencing datasets of the metacommunity DNA of the gut microbiota of naturally occurring and laboratory aquaculture green sea urchins Lytechinus variegatus

S. Watts, C. Morrow, Joseph A. Hakim, 2019, Data in brief.

Molecular analysis of Vibrio parahaemolyticus isolated from human patients and shellfish during US Pacific north‐west outbreaks

A. Bej, C. Kaysner, G. Kaufman, 2002, Letters in applied microbiology.

Approaches for Monitoring and Containing Genetically Engineered Microorganisms Released into the Environment

R. Atlas, M. Perlin, A. Bej, 1989 .

Genetically Engineered Microorganisms: Monitoring and Containing

A. Bej, M. H. Mahbubani, 1993 .

The Gut Microbiota of Naturally Occurring and Laboratory Aquaculture Lytechinus variegatus Revealed Differences in the Community Composition, Taxonomic Co-Occurrence, and Predicted Functional Attributes

S. Watts, C. Morrow, Joseph A. Hakim, 2021, Applied Microbiology.

Draft Genome Sequence of Janthinobacterium sp. Ant5-2-1, Isolated from Proglacial Lake Podprudnoye in the Schirmacher Oasis of East Antarctica

M. Crowley, A. Bej, D. Andersen, 2016, Genome Announcements.

Comparison of the microbial diversity and abundance between the freshwater land-locked lakes of Schirmacher Oasis, and the perennially ice-covered Lake Untersee in East Antarctica

Richard B. Hoover, Dale T. Andersen, Asim K. Bej, 2010, Optical Engineering + Applications.

Diversity of bacterial communities in the lakes of Schirmacher Oasis, Antarctica

Richard B. Hoover, Elena V. Pikuta, Asim K. Bej, 2009, Optical Engineering + Applications.

Detection of viableVibrio cholerae by reverse-transcriptase polymerase chain reaction (RT-PCR)

Daniel D. Jones, A. Bej, M. H. Mahbubani, 1996, Molecular biotechnology.

Metagenomics approach to the study of the gut microbiome structure and function in zebrafish Danio rerio fed with gluten formulated diet.

S. Watts, E. Lefkowitz, C. Morrow, 2017, Journal of microbiological methods.

Metagenomic data of the bacterial community in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)

A. Bej, Hyunmin Koo, 2015, Data in brief.

Draft Genome Sequence of Hymenobacter sp. Strain IS2118, Isolated from a Freshwater Lake in Schirmacher Oasis, Antarctica, Reveals Diverse Genes for Adaptation to Cold Ecosystems

J. D. Osborne, M. Crowley, A. Bej, 2014, Genome Announcements.

Body Metrics and the Gut Microbiome in Response to Macronutrient Limitation in the Zebrafish Danio rerio

S. Watts, A. Bej, Casey D. Morrow, 2023, Current developments in nutrition.

The Molecularly Crowded Cytoplasm of Bacterial Cells: Dividing Cells Contrasted with Viable but Non-culturable (VBNC) Bacterial Cells.

J. D. van Elsas, J. Trevors, A. Bej, 2013, Current issues in molecular biology.

High-throughput amplicon sequencing datasets of coastal sediments from three locations of the Gulf of Mexico, USA

C. Morrow, A. Bej, A. DePaola, 2023, Data in brief.

Anaerobic halo- alkaliphilic bacterial community of athalassic, hypersaline Mono lake and Owens Lake in California

Richard B. Hoover, Elena V. Pikuta, Ekaterina N. Detkova, 2003, SPIE Astronomical Telescopes + Instrumentation.

The antiproliferative function of violacein‐like purple violet pigment (PVP) from an Antarctic Janthinobacterium sp. Ant5‐2 in UV‐induced 2237 fibrosarcoma

Nazia Mojib, N. Yusuf, R. Hoover, 2011, International journal of dermatology.

Antimicrobial activity of PVP from an Antarctic bacterium, Janthinobacterium sp. Ant5-2, on multi-drug and methicillin resistant Staphylococcus aureus

Simon C Watkins, N. Mojib, A. Bej, 2012, Natural Products and Bioprospecting.

Spectral profiling and imaging (SPI): extending L.I.F.E. technology for the remote exploration of life in ice caves (R.E.L.I.C.) on Earth and Mars

Gregory A. Lyzenga, Michael C. Storrie-Lombardi, Richard B. Hoover, 2011, Optical Engineering + Applications.

Tsukamurella spongiae sp. nov., a novel actinomycete isolated from a deep-water marine sponge.

A. Bej, J. Olson, P. McCarthy, 2007, International journal of systematic and evolutionary microbiology.

Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)

N. Mojib, A. Bej, Hyunmin Koo, 2014, Antonie van Leeuwenhoek.

Distribution of cold adaptation proteins in microbial mats in Lake Joyce, Antarctica: Analysis of metagenomic data by using two bioinformatics tools.

Joseph A. Hakim, A. Bej, D. Andersen, 2016, Journal of microbiological methods.

Identification and Characterization of Extremophile Microorganisms with Significance to Astrobiology

A. Bej, 2003 .

PROGRAM MARSHALL SPACE FLIGHT CENTER THE UNIVERSITY OF ALABAMA AT BIRMINGHAM IDENTIFICATION AND CHARACTERIZATION OF EXTREMOPHILE MICROORGANISMS WITH SIGNIFICANCE TO ASTROBIOLOGY Prepared

R. Hoover, A. Bej, 2002 .

Metagenomics approach to the study of the gut microbiome structure and function in zebrafish Danio rerio fed with gluten formulated diet.

S. Watts, E. Lefkowitz, C. Morrow, 2017, Journal of microbiological methods.

CRISPR-Cas system

J. Trevors, Joseph A. Hakim, A. Bej, 2022 .