I. Blakley

发表

Microbial Associations With Microscopic Colitis

A. Fodor, J. Woosley, R. Sandler, 2021, bioRxiv.

Analysis and visualization of RNA-Seq expression data using RStudio, Bioconductor, and Integrated Genome Browser.

A. Loraine, N. Firon, J. Harper, 2015, Methods in molecular biology.

Cytokinin induces genome-wide binding of the type-B response regulator ARR10 to regulate growth and development in Arabidopsis

A. Loraine, J. Franco-Zorrilla, R. Solano, 2017, Proceedings of the National Academy of Sciences.

RNA-Seq Links the Transcription Factors AINTEGUMENTA and AINTEGUMENTA-LIKE6 to Cell Wall Remodeling and Plant Defense Pathways1[OPEN]

A. Loraine, J. Stratmann, I. Blakley, 2016, Plant Physiology.

RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

A. Loraine, M. Lila, I. Blakley, 2015, bioRxiv.

candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage- 2 specific alternative splicing 3

A. Loraine, M. Lila, I. Blakley, 2014 .

Race, the Vaginal Microbiome, and Spontaneous Preterm Birth

Jennifer M. Fettweis, A. Fodor, A. Siega-Riz, 2022, mSystems.

Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing

Nowlan H. Freese, A. Loraine, Jinjie Duan, 2018, bioRxiv.

The Arabidopsis transcription factor AINTEGUMENTA orchestrates patterning genes and auxin signaling in the establishment of floral growth and form

Nowlan H. Freese, A. Loraine, Yen-Yi Ho, 2020, The Plant journal : for cell and molecular biology.

Disentangling race, environment and the microbiome in a study of preterm birth risk

A. Fodor, A. Siega-Riz, G. Buck, 2021 .

Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing

Nowlan H. Freese, A. Loraine, Jinjie Duan, 2019, Plant direct.

An integrative analysis of the biological clock hypothesis in human gut microbiome

A. Fodor, Shan Sun, I. Blakley, 2022, bioRxiv.

Coordination of Chloroplast Development through the Action of the GNC and GLK Transcription Factor Families1[OPEN]

A. Loraine, J. Franco-Zorrilla, R. Solano, 2018, Plant Physiology.

RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing

Stig Uggerhøj Andersen, Ann E Loraine, Mary Ann Lila, 2015, bioRxiv.

On the robustness of inference of association with the gut microbiota in stool, swab and mucosal tissue samples

A. Fodor, H. Murff, M. Shrubsole, 2021, bioRxiv.

Air pollution exposure is associated with the gut microbiome as revealed by shotgun metagenomic sequencing.

R. Knight, A. Fodor, F. Lurmann, 2020, Environment international.

Characterization of the cytokinin-responsive transcriptome in rice

A. Loraine, J. Franco-Zorrilla, R. Solano, 2016, BMC Plant Biology.

A Comparison of transgenic and wild type soybean seeds: analysis of transcriptome profiles using RNA-Seq

A. Loraine, K. Bost, J. Schlueter, 2015, BMC Biotechnology.

candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage- 2 specific alternative splicing 3

A. Loraine, M. Lila, I. Blakley, 2014 .

Analysis of pollen-specific alternative splicing in Arabidopsis thaliana via semi-quantitative PCR

Nowlan H. Freese, Ann E. Loraine, A. Loraine, 2015, PeerJ.

Many rice genes are differentially spliced between roots and shoots but cytokinin hormone application has minimal effect on splicing

Nowlan H. Freese, A. Loraine, Jinjie Duan, 2018 .

On the robustness of inference of association with the gut microbiota in stool, rectal swab and mucosal tissue samples

A. Fodor, H. Murff, M. Shrubsole, 2021, Scientific Reports.