V. Kadnikov

发表

The water column of the Yamal tundra lakes as a microbial filter preventing methane emission

N. Ravin, M. Leibman, A. Savvichev, 2021 .

The water column of the Yamal tundra lakes as a microbial filter preventing methane emission

N. Ravin, M. Leibman, A. Savvichev, 2020 .

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Jonathan D. G. Jones, Karl G. Kugler, J. Rogers, 2018, Science.

Metabolic Diversity and Evolutionary History of the Archaeal Phylum “Candidatus Micrarchaeota” Uncovered from a Freshwater Lake Metagenome

N. Ravin, A. Mardanov, A. Savvichev, 2020, Applied and Environmental Microbiology.

Metagenomics: A Paradigm Shift in Microbiology

N. Ravin, A. Mardanov, V. Kadnikov, 2018 .

The 203 kbp Mitochondrial Genome of the Phytopathogenic Fungus Sclerotinia borealis Reveals Multiple Invasions of Introns and Genomic Duplications

N. Ravin, A. Mardanov, V. Kadnikov, 2014, PloS one.

Genome of the candidate phylum Aminicenantes bacterium from a deep subsurface thermal aquifer revealed its fermentative saccharolytic lifestyle

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Extremophiles.

Genome sequencing and annotation of Geobacillus sp. 1017, a hydrocarbon-oxidizing thermophilic bacterium isolated from a heavy oil reservoir (China)

A. Mardanov, V. Kadnikov, T. Nazina, 2016, Genomics data.

Microbial community structure in methane hydrate-bearing sediments of freshwater Lake Baikal.

N. Ravin, K. Skryabin, A. Mardanov, 2012, FEMS microbiology ecology.

Microorganisms associated with microscopic insects Megaphragma amalphitanum and Scydosella musawasensis

N. Ravin, K. Skryabin, A. Mardanov, 2017, Microbiology.

Characterization and Genome Analysis of the First Facultatively Alkaliphilic Thermodesulfovibrio Isolated from the Deep Terrestrial Subsurface

N. Ravin, A. Mardanov, V. Kadnikov, 2016, Front. Microbiol..

Genomic Analysis of Melioribacter roseus, Facultatively Anaerobic Organotrophic Bacterium Representing a Novel Deep Lineage within Bacteriodetes/Chlorobi Group

N. Ravin, S. Gavrilov, A. Mardanov, 2013, PloS one.

Sugar Metabolism of the First Thermophilic Planctomycete Thermogutta terrifontis: Comparative Genomic and Transcriptomic Approaches

A. Krogh, P. Menzel, A. Krogh, 2017, bioRxiv.

Desulfovibrio desulfuricans AY5 Isolated from a Patient with Autism Spectrum Disorder Binds Iron in Low-Soluble Greigite and Pyrite

N. Ravin, A. Mardanov, V. Kadnikov, 2021, Microorganisms.

Variability of the composition of the microbial community of the deep subsurface thermal aquifer in Western Siberia

N. Ravin, A. Mardanov, V. Kadnikov, 2017, Microbiology.

Microbial Life in the Deep Subsurface Aquifer Illuminated by Metagenomics

N. Ravin, A. Mardanov, V. Kadnikov, 2020, Frontiers in Microbiology.

Light-Dependent Methane Oxidation Is the Major Process of the Methane Cycle in the Water Column of the Bol’shie Khruslomeny Polar Lake

N. Ravin, A. Savvichev, I. Rusanov, 2019, Microbiology.

Methane-Oxidizing Activity and Phylogenetic Diversity of Aerobic Methanotrophs in the Laptev Sea Upper Sediment Horizons

N. Pimenov, N. Ravin, I. Rusanov, 2021, Microbiology.

Comparative Study of Methanogenic Pathways in the Sediments of Thermokarst and Polygenetic Yamal Lakes

N. Pimenov, N. Ravin, M. Leibman, 2021 .

Uncultured bacteria and methanogenic archaea predominate in the microbial community of Western Siberian deep subsurface aquifer

N. Ravin, A. Mardanov, V. Kadnikov, 2017, Microbiology.

Sulfur-Oxidizing Bacteria Dominate in the Water from a Flooded Coal Mine Shaft in Kuzbass

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Microbiology.

Two New Species of Filamentous Sulfur Bacteria of the Genus Thiothrix, Thiothrix winogradskyi sp. nov. and ‘Candidatus Thiothrix sulfatifontis’ sp. nov.

N. Ravin, A. Mardanov, V. Kadnikov, 2022, Microorganisms.

Sulfate Reduction in Underground Horizons of a Flooded Coal Mine in Kuzbass

E. A. Latygolets, N. Ravin, I. Rusanov, 2020, Microbiology.

Phylogenetic diversity in sulphate-reducing bacterial communities from oxidised and reduced bottom sediments of the Barents Sea

N. Pimenov, N. Ravin, I. Rusanov, 2022, Antonie van Leeuwenhoek.

Diversity of Eukaryotic Microorganisms in the Drainage Waters of a Coal Open-Cast Mine

N. Ravin, A. Mardanov, V. Kadnikov, 2020 .

Microbial Community of a Marine Meromictic Trough (Biofilter Bay) in the Kandalaksha Bay, White Sea

A. A. Kulakova, A. Savvichev, I. Rusanov, 2022, Microbiology.

Composition of the microbial communities of bituminous constructions at natural oil seeps at the bottom of Lake Baikal

N. Ravin, A. Mardanov, V. Kadnikov, 2013, Microbiology.

Genome of a Member of the Candidate Archaeal Phylum Verstraetearchaeota from a Subsurface Thermal Aquifer Revealed Pathways of Methyl-Reducing Methanogenesis and Fermentative Metabolism

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Microbiology.

A metagenomic window into the 2-km-deep terrestrial subsurface aquifer revealed multiple pathways of organic matter decomposition.

N. Ravin, A. Mardanov, V. Kadnikov, 2018, FEMS microbiology ecology.

A genomic catalog of Earth’s microbiomes

Vincent J. Denef, Natalia N. Ivanova, Paramvir S. Dehal, 2020, Nature Biotechnology.

Complete Genome of a Member of a New Bacterial Lineage in the Microgenomates Group Reveals an Unusual Nucleotide Composition Disparity Between Two Strands of DNA and Limited Metabolic Potential

N. Ravin, A. Mardanov, V. Kadnikov, 2020, Microorganisms.

Genome sequence and analysis of methylotrophic yeast Hansenula polymorpha DL1

J. Schneider, N. Ravin, O. Dontsova, 2013, BMC Genomics.

Characteristics of the new plasmid, pMTB1, from the metagenome of the microbial community of underground thermal waters of Western Siberia

V. Kadnikov, A. Beletsky, A. V. Mardanov, 2014, Biology Bulletin.

Metagenomic Analysis of the Dynamic Changes in the Gut Microbiome of the Participants of the MARS-500 Experiment, Simulating Long Term Space Flight

N. Ravin, M. P. Kirpichnikov, K. Skryabin, 2013, Acta naturae.

Genome sequence of the acid-tolerant Desulfovibrio sp. DV isolated from the sediments of a Pb-Zn mine tailings dam in the Chita region, Russia

A. Mardanov, V. Kadnikov, A. Beletsky, 2017, Genomics data.

Characterization of Melioribacter roseus gen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the class Ignavibacteria, and a proposal of a novel bacterial phylum Ignavibacteriae.

S. Gavrilov, A. Mardanov, E. Bonch‐Osmolovskaya, 2013, Environmental microbiology.

Evolutionary stasis of a deep subsurface microbial lineage

R. Stepanauskas, N. Ravin, E. van Heerden, 2021, The ISME Journal.

Microbial Communities Involved in Methane, Sulfur, and Nitrogen Cycling in the Sediments of the Barents Sea

N. Pimenov, N. Ravin, A. Mardanov, 2021, Microorganisms.

Targeted isolation based on metagenome-assembled genomes reveals a phylogenetically distinct group of thermophilic spirochetes from deep biosphere.

N. Ravin, A. Mardanov, V. Kadnikov, 2020, Environmental microbiology.

Microbial Processes and Microbial Communities in the Water Column of the Polar Meromictic Lake Bol’shie Khruslomeny at the White Sea Coast

N. Ravin, A. Mardanov, A. Savvichev, 2020, Frontiers in Microbiology.

The structure of microbial communities of activated sludge of large-scale wastewater treatment plants in the city of Moscow

N. Pimenov, N. Ravin, A. Mardanov, 2022, Scientific Reports.

New Insight Into the Interspecies Shift of Anammox Bacteria Ca. “Brocadia” and Ca. “Jettenia” in Reactors Fed With Formate and Folate

N. Pimenov, N. Ravin, A. Mardanov, 2022, Frontiers in Microbiology.

Lignite coal burning seam in the remote Altai Mountains harbors a hydrogen-driven thermophilic microbial community

A. Mardanov, V. Kadnikov, A. Beletsky, 2018, Scientific Reports.

Metagenomic Analysis of the Microbial Community in the Underground Coal Fire Area (Kemerovo Region, Russia) Revealed Predominance of Thermophilic Members of the Phyla Deinococcus-Thermus, Aquificae, and Firmicutes

N. Ravin, A. Mardanov, V. Kadnikov, 2021, Microbiology.

Sugar metabolism of the first thermophilic planctomycete Thermogutta terrifontis: comparative genomic and transcriptomic approaches

A. Krogh, P. Menzel, S. Gudbergsdóttir, 2017 .

Genomic insights into a new acidophilic, copper-resistant Desulfosporosinus isolate from the oxidized tailings area of an abandoned gold mine.

N. Ravin, A. Mardanov, V. Kadnikov, 2016, FEMS microbiology ecology.

Domestication of previously uncultivated Candidatus Desulforudis audaxviator from a deep aquifer in Siberia sheds light on its physiology and evolution

N. Ravin, A. Mardanov, V. Kadnikov, 2019, The ISME Journal.

Ultramicrobacteria from Nitrate- and Radionuclide-Contaminated Groundwater

E. V. Zakharova, N. Ravin, A. Mardanov, 2020, Sustainability.

Microbial communities involved in the methane cycle in the near-bottom water layer and sediments of the meromictic subarctic Lake Svetloe

N. Pimenov, N. Ravin, A. Mardanov, 2019, Antonie van Leeuwenhoek.

Complete Genome Sequence of an Uncultured Bacterium of the Candidate Phylum Bipolaricaulota

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Microbiology.

Sulfur-Oxidizing Bacteria Dominate in the Water from a Flooded Coal Mine Shaft in Kuzbass

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Microbiology.

Phylogeny and physiology of candidate phylum BRC1 inferred from the first complete metagenome-assembled genome obtained from deep subsurface aquifer.

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Systematic and applied microbiology.

A Novel Bacteriophage of the Order Caudovirales from the Soil Metagenome in the Area of an Underground Coal Seam Fire

N. Ravin, V. Kadnikov, A. Beletsky, 2019, Microbiology.

Plastid Genomes of Carnivorous Plants Drosera rotundifolia and Nepenthes × ventrata Reveal Evolutionary Patterns Resembling Those Observed in Parasitic Plants

N. Ravin, K. Skryabin, A. Mardanov, 2019, International journal of molecular sciences.

A novel uncultured bacterium of the family Gallionellaceae: Description and genome reconstruction based on metagenomic analysis of microbial community in acid mine drainage

N. Ravin, A. Mardanov, V. Kadnikov, 2016, Microbiology.

Stable and Variable Parts of Microbial Community in Siberian Deep Subsurface Thermal Aquifer System Revealed in a Long-Term Monitoring Study

N. Ravin, S. Gavrilov, A. Mardanov, 2016, Front. Microbiol..

Closely Located but Totally Distinct: Highly Contrasting Prokaryotic Diversity Patterns in Raised Bogs and Eutrophic Fens

N. Ravin, A. Mardanov, S. Dedysh, 2020, Microorganisms.

Coexistence of Psychrophilic, Mesophilic, and Thermophilic Sulfate-Reducing Bacteria in a Deep Subsurface Aquifer Associated with Coal-Bed Methane Production.

N. Pimenov, N. Ravin, I. Rusanov, 2023, Microbial ecology.

Active Sulfate-Reducing Bacterial Community in the Camel Gut

N. Pimenov, N. Ravin, I. Rusanov, 2023, Microorganisms.

Biogeochemical Activity of Methane-Related Microbial Communities in Bottom Sediments of Cold Seeps of the Laptev Sea

N. Ravin, A. Savvichev, I. Rusanov, 2023, Microorganisms.

Highly Distinct Microbial Communities in Elevated Strings and Submerged Flarks in the Boreal Aapa-Type Mire

N. Ravin, A. Mardanov, S. Dedysh, 2022, Microorganisms.

Sulfidogenic Microbial Communities of the Uzen High-Temperature Oil Field in Kazakhstan

A. Mardanov, V. Kadnikov, A. Beletsky, 2021, Microorganisms.

Thermophilic Chloroflexi Dominate in the Microbial Community Associated with Coal-Fire Gas Vents in the Kuznetsk Coal Basin, Russia

N. Ravin, A. Mardanov, V. Kadnikov, 2021, Microorganisms.

Sulfur and Methane-Oxidizing Microbial Community in a Terrestrial Mud Volcano Revealed by Metagenomics

N. Ravin, A. Mardanov, V. Kadnikov, 2020, Microorganisms.

Selection of a Microbial Community in the Course of Formation of Acid Mine Drainage

V. Kadnikov, A. Beletsky, A. V. Mardanov, 2019, Microbiology.

Extensive plastome reduction and loss of photosynthesis genes in Diphelypaea coccinea, a holoparasitic plant of the family Orobanchaceae

N. Ravin, A. Mardanov, V. Kadnikov, 2019, PeerJ.

The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys

N. Ravin, K. Skryabin, A. Mardanov, 2016, BMC Plant Biology.

Structure and Seasonal Variability of Microbial Communities of Groundwater in the City of Moscow

V. Kadnikov, A. Beletsky, A. V. Mardanov, 2023, Microbiology.

Genome Analysis of a Member of the Uncultured Phylum Riflebacteria Revealed Pathways of Organotrophic Metabolism and Dissimilatory Iron Reduction

N. Ravin, A. Mardanov, V. Kadnikov, 2020, Microbiology.

Diversity of bacteria of the genus Bacillus on board of international space station

N. Ravin, K. Skryabin, A. Mardanov, 2015, Doklady Biochemistry and Biophysics.

A novel uncultured bacterium of the family Gallionellaceae: Description and genome reconstruction based on metagenomic analysis of microbial community in acid mine drainage

V. Kadnikov, A. V. Mardanov, O. Karnachuk, 2016, Microbiology.

Methane Cycle in a Littoral Site of a Temperate Freshwater Lake

S. Toshchakov, A. O. Izotova, E. Vinogradova, 2023, Microbiology.

Molecular analysis of the intestinal microbiome composition of mammoth and woolly rhinoceros

N. Ravin, K. Skryabin, A. Mardanov, 2012, Doklady Biochemistry and Biophysics.

Effect of metal concentration on the microbial community in acid mine drainage of a polysulfide ore deposit

V. Kadnikov, A. Beletsky, A. V. Mardanov, 2016, Microbiology.

Diversity of Eukaryotic Microorganisms in the Drainage Waters of a Coal Open-Cast Mine

A. Mardanov, V. Kadnikov, A. Beletsky, 2020, Microbiology.

Domestication of previously uncultivated Candidatus Desulforudis audaxviator from a deep aquifer in Siberia sheds light on its physiology and evolution

N. Ravin, A. Mardanov, V. Kadnikov, 2019, The ISME Journal.

Draft genome sequence of the first acid-tolerant sulfate-reducing deltaproteobacterium Desulfovibrio sp. TomC having potential for minewater treatment.

N. Ravin, A. Mardanov, V. Kadnikov, 2015, FEMS microbiology letters.

Anaerobic Thermodesulfovibrio and Aerobic Meiothermus Coexist in Deep Thermal Water

A. Mardanov, I. Rusanov, V. Kadnikov, 2023, Microbiology.

Genome Analysis of Thermosulfurimonas dismutans, the First Thermophilic Sulfur-Disproportionating Bacterium of the Phylum Thermodesulfobacteria

N. Ravin, A. Mardanov, V. Kadnikov, 2016, Front. Microbiol..

Draft Genome Sequence of Sclerotinia borealis, a Psychrophilic Plant Pathogenic Fungus

N. Ravin, A. Mardanov, V. Kadnikov, 2014, Genome Announcements.

Prokaryotic Life Associated with Coal-Fire Gas Vents Revealed by Metagenomics

N. Ravin, A. Mardanov, V. Kadnikov, 2023, Biology.

Lignite coal burning seam in the remote Altai Mountains harbors a hydrogen-driven thermophilic microbial community

A. Mardanov, V. Kadnikov, A. Beletsky, 2018, Scientific Reports.

Selection of a Microbial Community in the Course of Formation of Acid Mine Drainage

N. Ravin, A. Mardanov, V. Kadnikov, 2019, Microbiology.

Genomes of three bacteriophages from the deep subsurface aquifer

N. Ravin, A. Mardanov, V. Kadnikov, 2018, Data in brief.

Metagenome of the Siberian Underground Water Reservoir

N. Ravin, A. Mardanov, V. Kadnikov, 2017, Genome Announcements.

Effect of metal concentration on the microbial community in acid mine drainage of a polysulfide ore deposit

N. Ravin, A. Mardanov, V. Kadnikov, 2016, Microbiology.

Microbial Community Composition and Rates of the Methane Cycle Microbial Processes in the Upper Sediments of the Yamal Sector of the Southwestern Kara Sea

N. Ravin, A. Savvichev, I. Rusanov, 2018, Microbiology.

Characteristics of the new plasmid, pMTB1, from the metagenome of the microbial community of underground thermal waters of Western Siberia

N. Ravin, A. Mardanov, V. Kadnikov, 2014, Biology Bulletin.

Variability of the composition of the microbial community of the deep subsurface thermal aquifer in Western Siberia

N. Ravin, A. Mardanov, V. Kadnikov, 2017, Microbiology.

Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum

N. Ravin, K. Skryabin, A. Mardanov, 2016, Genomics data.

Hydrochemical Data Report from Sampling of Two deep Abandoned Hydrocarbon Exploration Wells: Byelii Yar and Parabel’, Tomsk oblast’, Western Siberia, Russian Federation

A. Boyce, V. Kadnikov, D. Banks, 2014 .

The low-temperature germinating spores of the thermophilic Desulfofundulus contribute to an extremely high sulfate reduction in burning coal seams

N. Ravin, A. Mardanov, I. Rusanov, 2023, Frontiers in Microbiology.

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Jonathan D. G. Jones, Karl G. Kugler, J. Rogers, 2018, Science.

Composition of the microbial communities of bituminous constructions at natural oil seeps at the bottom of Lake Baikal

N. Ravin, A. Mardanov, V. Kadnikov, 2013, Microbiology.

A Novel View of the Diversity of Anoxygenic Phototrophic Bacteria Inhabiting the Chemocline of Meromictic Karst Lakes

A. Savvichev, V. Kadnikov, E. Veslopolova, 2023, Microorganisms.

Sugar Metabolism of the First Thermophilic Planctomycete Thermogutta terrifontis: Comparative Genomic and Transcriptomic Approaches

A. Krogh, P. Menzel, S. Gudbergsdóttir, 2017, bioRxiv.

Microbiological Study of Yamal Lakes: A Key to Understanding the Evolution of Gas Emission Craters

N. Pimenov, N. Ravin, M. Leibman, 2018, Geosciences.

Microbial Community of a Marine Meromictic Trough (Biofilter Bay) in the Kandalaksha Bay, White Sea

A. A. Kulakova, A. Savvichev, I. Rusanov, 2022, Microbiology.

Microbial communities involved in the methane cycle in the near-bottom water layer and sediments of the meromictic subarctic Lake Svetloe

N. Pimenov, N. Ravin, A. Mardanov, 2019, Antonie van Leeuwenhoek.

Aerotolerant Thiosulfate-Reducing Bacterium Fusibacter sp. Strain WBS Isolated from Littoral Bottom Sediments of the White Sea—Biochemical and Genome Analysis

A. Savvichev, V. Kadnikov, A. Beletsky, 2023, Microorganisms.