T. Barbeyron

发表

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

G. Michel, M. Czjzek, J. Hehemann, 2010, Nature.

The kappa-carrageenase of the marine bacterium Cytophaga drobachiensis. Structural and phylogenetic relationships within family-16 glycoside hydrolases.

B. Henrissat, B. Kloareg, P. Potin, 1998, Molecular biology and evolution.

Identification of catalytic residues and mechanistic analysis of family GH82 iota-carrageenases.

G. Michel, M. Czjzek, T. Barbeyron, 2010, Biochemistry.

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT.

R. Amann, H. Teeling, A. Goesmann, 2016, Environmental microbiology.

Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity

M. Hoebeke, G. Michel, Christophe Caron, 2016, PloS one.

The Catalytic Activities of the Bifunctional Azotobacter vinelandii Mannuronan C-5-Epimerase and Alginate Lyase AlgE7 Probably Originate from the Same Active Site in the Enzyme*

M. Hartmann, B. G. Svanem, H. Ertesvåg, 2001, The Journal of Biological Chemistry.

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

Susana M. Coelho, J. Poulain, J. Weissenbach, 2013, Proceedings of the National Academy of Sciences.

DNA adenine methylation of GATC sequences appeared recently in the Escherichia coli lineage

P. Forterre, T. Barbeyron, K. Kean, 1984, Journal of bacteriology.

Identification and Characterization of a Halotolerant, Cold-Active Marine Endo-β-1,4-Glucanase by Using Functional Metagenomics of Seaweed-Associated Microbiota

G. Michel, D. Portetelle, M. Vandenbol, 2014, Applied and Environmental Microbiology.

Genome and metabolic network of “Candidatus Phaeomarinobacter ectocarpi” Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae

Anne Siegel, Catherine Boyen, Simon M. Dittami, 2014, Front. Genet..

Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp

P. Rouzé, P. Wincker, Y. van de Peer, 2021, BMC biology.

The κ-carrageenase of P. carrageenovora Features a Tunnel-Shaped Active Site

B. Henrissat, B. Kloareg, G. Michel, 2001 .

A single bacterial sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium

James A. London, P. Eyers, G. Michel, 2020, bioRxiv.

Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9T to Adapt to Macroalgal Niches

D. Vallenet, G. Michel, T. Barbeyron, 2018, Front. Microbiol..

Discovery of a novel iota carrageenan sulfatase isolated from the marine bacterium Pseudoalteromonas carrageenovora

A. Groisillier, H. Rogniaux, T. Barbeyron, 2014, Front. Chem..

Degradation of lambda-carrageenan by Pseudoalteromonas carrageenovora lambda-carrageenase: a new family of glycoside hydrolases unrelated to kappa- and iota-carrageenases.

B. Kloareg, G. Michel, S. Colin, 2007, The Biochemical journal.

Microbiota Metagenomics of Seaweed-Associated-1 , 4-Glucanase by Using Functional β Halotolerant , Cold-Active Marine Endo-Identification and Characterization of a

G. Michel, D. Portetelle, M. Vandenbol, 2014 .

Functional screening of a metagenomic library of seaweed-associated 1 microbiota : identification and characterization of a halotolerant , cold-2 active marine endo-ß-1 , 4-endoglucanase 3 4

G. Michel, D. Portetelle, M. Vandenbol, 2014 .

Hexuronyl C5-epimerases in alginate and glycosaminoglycan biosynthesis.

H. Ertesvåg, S. Valla, T. Barbeyron, 2001, Biochimie.

Cloning and biochemical characterization of the fucanase FcnA: definition of a novel glycoside hydrolase family specific for sulfated fucans.

B. Kloareg, G. Michel, N. Kervarec, 2006, Glycobiology.

Expression, purification, crystallization and preliminary x-ray analysis of the kappa-carrageenase from Pseudoalteromonas carrageenovora.

T. Vernet, B. Kloareg, G. Michel, 1999, Acta crystallographica. Section D, Biological crystallography.

Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota

James A. London, P. Eyers, D. Byrne, 2022, Nature Chemical Biology.

Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota

James A. London, P. Eyers, D. Byrne, 2022, Nature Chemical Biology.

Evidence that a plasmid from a hyperthermophilic archaebacterium is relaxed at physiological temperatures

P. Forterre, G. Erauso, D. Prieur, 1992, Journal of bacteriology.

iota-Carrageenases constitute a novel family of glycoside hydrolases, unrelated to that of kappa-carrageenases.

B. Henrissat, B. Kloareg, G. Michel, 2000, The Journal of biological chemistry.

Author Correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp

P. Rouzé, P. Wincker, Y. van de Peer, 2021, BMC biology.

Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota

James A. London, P. Eyers, D. Byrne, 2022, Nature Chemical Biology.

The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

G. Michel, Z. Rouy, T. Barbeyron, 2017, Front. Microbiol..

Consuming fresh macroalgae induces specific catabolic pathways, stress reactions and Type IX secretion in marine flavobacterial pioneer degraders

T. Barbeyron, F. Thomas, Maéva Brunet, 2022, The ISME Journal.

Expression, purification, crystallization and preliminary X-ray analysis of the iota-carrageenase from Alteromonas fortis.

T. Vernet, B. Kloareg, G. Michel, 2000, Acta crystallographica. Section D, Biological crystallography.

Commensual bacteria living two multicellular marine algae Antithamnion plumula (Ellis) Thuret and Cladophora rupestris (L.) Kützing (Linné), Kützing. Phenotypic characterization

T. Barbeyron, Y. Berger, 1989 .

Functional screening of a metagenomic library from algal biofilms.

G. Michel, M. Vandenbol, T. Barbeyron, 2013, Communications in agricultural and applied biological sciences.

Discovering novel enzymes by functional screening of plurigenomic libraries from alga-associated Flavobacteriia and Gammaproteobacteria.

G. Michel, M. Vandenbol, T. Barbeyron, 2016, Microbiological research.

Isolation and Culture of a Marine Bacterium Degrading the Sulfated Fucans from Marine Brown Algae

B. Kloareg, P. Potin, M. Lahaye, 2006, Marine Biotechnology.

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

C. Médigue, D. Vallenet, G. Michel, 2017, Nature Communications.

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

C. Médigue, D. Vallenet, G. Michel, 2017, Nature Communications.

SulfAtlas, the sulfatase database: state of the art and new developments

M. Hoebeke, E. Corre, G. Michel, 2022, Nucleic acids research.

Metabolic strategies of sharing pioneer bacteria mediating fresh macroalgae breakdown

T. Barbeyron, F. Thomas, Nolwen Le Duff, 2021, bioRxiv.

Specific detection and quantification of the marine flavobacterial genus Zobellia on macroalgae using novel qPCR and CARD-FISH assays.

R. Amann, B. Fuchs, T. Barbeyron, 2021, Systematic and applied microbiology.

Zobellia roscoffensis sp. nov. and Zobellia nedashkovskayae sp. nov., two flavobacteria from the epiphytic microbiota of the brown alga Ascophyllum nodosum, and emended description of the genus Zobellia.

E. Corre, M. Vandenbol, T. Barbeyron, 2021, International journal of systematic and evolutionary microbiology.

A Novel Enzyme Portfolio for Red Algal Polysaccharide Degradation in the Marine Bacterium Paraglaciecola hydrolytica S66T Encoded in a Sizeable Polysaccharide Utilization Locus

M. A. Glaring, M. Czjzek, P. Stougaard, 2018, Front. Microbiol..

Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides.

T. Tonon, G. Michel, M. Czjzek, 2012, Environmental microbiology.

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans*

G. Michel, M. Czjzek, J. Hehemann, 2012, The Journal of Biological Chemistry.

Discovery and structural characterization of a novel glycosidase family of marine origin.

A. Groisillier, G. Michel, M. Czjzek, 2011, Environmental microbiology.

Evaluation of reference genes for real-time quantitative PCR in the marine flavobacterium Zobellia galactanivorans.

G. Michel, T. Barbeyron, F. Thomas, 2011, Journal of microbiological methods.

Degradation of λ-carrageenan by Pseudoalteromonas carrageenovora λ-carrageenase: a new family of glycoside hydrolases unrelated to κ- and ι-carrageenases

B. Kloareg, G. Michel, S. Colin, 2007 .

The kappa-carrageenase of P. carrageenovora features a tunnel-shaped active site: a novel insight in the evolution of Clan-B glycoside hydrolases.

B. Henrissat, B. Kloareg, G. Michel, 2001, Structure.

ι-Carrageenases Constitute a Novel Family of Glycoside Hydrolases, Unrelated to That of κ-Carrageenases*

B. Henrissat, B. Kloareg, G. Michel, 2000, The Journal of Biological Chemistry.

Bioconversion of red seaweed galactans: a focus on bacterial agarases and carrageenases

G. Michel, M. Czjzek, T. Barbeyron, 2006, Applied Microbiology and Biotechnology.

The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria

G. Michel, D. Portetelle, M. Vandenbol, 2015, Front. Microbiol..

Zobellia galactanovorans gen. nov., sp. nov., a marine species of Flavobacteriaceae isolated from a red alga, and classification of [Cytophaga] uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Zobellia uliginosa gen. nov., comb. nov.

E. Corre, B. Kloareg, P. Potin, 2001, International journal of systematic and evolutionary microbiology.

Substrate specificity of the recombinant alginate lyase from the marine bacteria Pseudomonas alginovora.

M. Czjzek, T. Barbeyron, M. Jam, 2012, Carbohydrate research.

A Functional Study of Transforming Growth Factor-Beta from the Gonad of Pacific Oyster Crassostrea gigas

A. Groisillier, M. Czjzek, A. Huvet, 2011, Marine Biotechnology.

A single sulfatase is required to access colonic mucin by a gut bacterium

James A. London, P. Eyers, G. Michel, 2021, Nature.

Persicivirga ulvanivorans sp. nov., a marine member of the family Flavobacteriaceae that degrades ulvan from green algae.

J. Sassi, T. Barbeyron, W. Helbert, 2011, International journal of systematic and evolutionary microbiology.

Mariniflexile fucanivorans sp. nov., a marine member of the Flavobacteriaceae that degrades sulphated fucans from brown algae.

G. Michel, M. Czjzek, S. L’Haridon, 2008, International journal of systematic and evolutionary microbiology.

Description of Maribacter forsetii sp. nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of the genus Maribacter.

R. Amann, G. Michel, S. L’Haridon, 2008, International journal of systematic and evolutionary microbiology.

Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms

R. Amann, H. Teeling, B. Fuchs, 2018, The ISME Journal.

A rapid method for the separation and analysis of carrageenan oligosaccharides released by iota- and kappa -carrageenase.

B. Kloareg, P. Potin, T. Barbeyron, 2001, Carbohydrate research.

The sulphated-galactan hydrolases, agarases and carrageenases : structural biology and molecular evolution

B. Kloareg, G. Michel, P. Potin, 2001 .

Processing and hydrolytic mechanism of the cgkA-encoded kappa-carrageenase of Alteromonas carrageenovora.

B. Henrissat, B. Kloareg, P. Potin, 1995, European journal of biochemistry.

Comparative Characterization of Two Marine Alginate Lyases from Zobellia galactanivorans Reveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate*

G. Michel, M. Czjzek, T. Barbeyron, 2013, The Journal of Biological Chemistry.

The family 6 carbohydrate-binding modules have coevolved with their appended catalytic modules toward similar substrate specificity.

B. Kloareg, G. Michel, M. Czjzek, 2009, Glycobiology.

Alpha-Agarases Define a New Family of Glycoside Hydrolases, Distinct from Beta-Agarase Families

B. Kloareg, G. Michel, P. Potin, 2007, Applied and Environmental Microbiology.

Beta-Agarase Families Glycoside Hydrolases , Distinct from Alpha-Agarases Define a New Family of

B. Kloareg, G. Michel, P. Potin, 2007 .

Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophile

P. Forterre, M. Baucher, Y. Zivanovic, 1996, Journal of bacteriology.

The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901T Reveals a Broad Potential for Degradation of Algal Polysaccharides

R. Amann, H. Teeling, Sixing Huang, 2013, Applied and Environmental Microbiology.

Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota

James A. London, P. Eyers, D. Byrne, 2021, bioRxiv.

The Three-dimensional Structures of Two β-Agarases*

B. Henrissat, B. Kloareg, M. Czjzek, 2003, Journal of Biological Chemistry.

Characterization of Mannuronan C-5-Epimerase Genes from the Brown Alga Laminaria digitata1

D. Scornet, C. Boyen, E. Corre, 2003, Plant Physiology.

Structural insights into marine carbohydrate degradation by family GH16 κ-carrageenases

G. Michel, M. Czjzek, C. Leroux, 2017, The Journal of Biological Chemistry.

Seasonal dynamics of a glycan-degrading flavobacterial genus in a tidally-mixed coastal temperate habitat

S. Romac, T. Barbeyron, F. Thomas, 2023, bioRxiv.

The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours.

B. Kloareg, G. Michel, P. Potin, 2005, The Biochemical journal.

The gene encoding the kappa-carrageenase of Alteromonas carrageenovora is related to beta-1,3-1,4-glucanases.

B. Henrissat, B. Kloareg, T. Barbeyron, 1994, Gene.

Arylsulphatase from Alteromonas carrageeno vora

O. Collin, B. Kloareg, T. Barbeyron, 2008 .

Arylsulphatase from Alteromonas carrageenovora.

O. Collin, B. Kloareg, P. Potin, 1995, Microbiology.

Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom

R. Amann, H. Teeling, Sixing Huang, 2014, The ISME Journal.

Preparation of guluronate lyase from Pseudomonas alginovora for protoplast isolation in Laminaria

C. Boyen, B. Kloareg, T. Barbeyron, 1990 .

Alteromonas fortis sp. nov., a non-flagellated bacterium specialized in the degradation of iota-carrageenan, and emended description of the genus Alteromonas.

G. Michel, T. Barbeyron, E. Duchaud, 2019, International journal of systematic and evolutionary microbiology.

Genes encoding β-agarases and their use in the production of enzymes for the biodegradation of agar

B. Kloareg, P. Potin, T. Barbeyron, 1999 .

Assembly and synthesis of the extracellular matrix in brown algae.

B. Henrissat, Elodie Drula, C. Nagasato, 2022, Seminars in cell & developmental biology.

Expression, purification and preliminary X-ray diffraction analysis of the catalytic module of a beta-agarase from the flavobacterium Zobellia galactanivorans.

G. Michel, M. Czjzek, J. Hehemann, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

Cloning, sequencing and overexpression in Escherichia coli of the alginatelyase-encoding aly gene of Pseudomonas alginovora: identification of three classes of alginate lyases.

B. Henrissat, J. Ghuysen, P. Potin, 1996, The Biochemical journal.

Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms

R. Amann, H. Teeling, B. Fuchs, 2018, The ISME Journal.

Zobellia alginiliquefaciens sp. nov., a novel member of the flavobacteria isolated from the epibiota of the brown alga Ericaria zosteroides (C. Agardh) Molinari & Guiry 2020.

T. Barbeyron, F. Thomas, E. Duchaud, 2023, International Journal of Systematic and Evolutionary Microbiology.

Zobellia alginoliquefaciens sp. nov., a new flavobacteria isolated from the epibiota of the brown alga Ericaria zosteroides (C.Agardh) Molinari & Guiry 2020

T. Barbeyron, F. Thomas, E. Duchaud, 2023, bioRxiv.

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

G. Michel, M. Czjzek, J. Hehemann, 2010, Nature.

Paraglaciecola hydrolytica sp. nov., a bacterium with hydrolytic activity against multiple seaweed-derived polysaccharides.

M. A. Glaring, M. Czjzek, P. Stougaard, 2017, International journal of systematic and evolutionary microbiology.

Discovery and structural characterization of a novel glycosidase family of marine origin.

A. Groisillier, G. Michel, M. Czjzek, 2011, Environmental microbiology.

Mariniflexile fucanivorans sp. nov., a marine member of the Flavobacteriaceae that degrades sulphated fucans from brown algae.

G. Michel, M. Czjzek, S. L’Haridon, 2008, International journal of systematic and evolutionary microbiology.