J. Bou Khalil

发表

Oyster hemolymph is a complex and dynamic ecosystem hosting bacteria, protists and viruses

C. Desnues, B. La Scola, E. Corre, 2020, Animal microbiome.

Rapid Detection of Imipenem Resistance in Gram-Negative Bacteria Using Tabletop Scanning Electron Microscopy: A Preliminary Evaluation

D. Raoult, J. Rolain, A. Hisada, 2021, Frontiers in Microbiology.

Ultrarapid diagnosis, microscope imaging, genome sequencing, and culture isolation of SARS-CoV-2

D. Raoult, B. La Scola, P. Colson, 2020, European Journal of Clinical Microbiology & Infectious Diseases.

Developmental Cycle and Genome Analysis of “Rubidus massiliensis,” a New Vermamoeba vermiformis Pathogen

D. Raoult, B. La Scola, J. Bou Khalil, 2016, Front. Cell. Infect. Microbiol..

Rapid Scanning Electron Microscopy Detection and Sequencing of Severe Acute Respiratory Syndrome Coronavirus 2 and Other Respiratory Viruses

D. Raoult, B. La Scola, A. Levasseur, 2020, Frontiers in Microbiology.

Comparison of a Modern and Fossil Pithovirus Reveals Its Genetic Conservation and Evolution

C. Robert, D. Raoult, B. La Scola, 2016, Genome biology and evolution.

Role of the R349 Gene and Its Repeats in the MIMIVIRE Defense System

B. La Scola, J. Bou Khalil, J. Abrahão, 2019, Front. Microbiol..

High-throughput isolation of giant viruses using high-content screening

B. La Scola, J. Bou Khalil, Y. Ominami, 2019, Communications Biology.

Adapted Protocol for Saccharibacteria Cocultivation: Two New Members Join the Club of Candidate Phyla Radiation

D. Raoult, F. Bittar, J. Bou Khalil, 2021, Microbiology Spectrum.

Anaerosphaera massiliensis sp. nov., a new bacterium isolated from the stool of a 39-year-old Pygmy

D. Raoult, J. Bou Khalil, M. Bilen, 2019, New microbes and new infections.

A new protectant medium preserving bacterial viability after freeze drying.

D. Raoult, J. Bou Khalil, J. Lagier, 2020, Microbiological research.

Clostridium transplantifaecale sp. nov., a new bacterium isolated from patient with recurrent Clostridium difficile infection

D. Raoult, J. Bou Khalil, J. Baudoin, 2019, New microbes and new infections.

Atypical Cowpox Virus Infection in Smallpox-Vaccinated Patient, France

D. Raoult, B. La Scola, J. Bou Khalil, 2019, Emerging infectious diseases.

Draft genome and description of Chryseobacterium phocaeense sp. nov.: a new bacterial species isolated from the sputum of a cystic fibrosis patient

D. Raoult, P. Fournier, F. Bittar, 2019, Archives of Microbiology.

Passive Filtration, Rapid Scanning Electron Microscopy, and Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Treponema Culture and Identification from the Oral Cavity

D. Raoult, A. Hisada, A. Levasseur, 2019, Journal of Clinical Microbiology.

Full-repertoire comparison of the microscopic objects composing the human gut microbiome with sequenced and cultured communities

J. Bou Khalil, J. Baudoin, D. Raoult, 2020, Journal of Microbiology.

The Strengths of Scanning Electron Microscopy in Deciphering SARS-CoV-2 Infectious Cycle

D. Raoult, B. La Scola, J. Bou Khalil, 2020, Frontiers in Microbiology.

High-speed large-scale automated isolation of SARS-CoV-2 from clinical samples using miniaturized co-culture coupled to high-content screening

D. Raoult, B. La Scola, B. Scola, 2020, bioRxiv.

Single Cell Micro-aspiration as an Alternative Strategy to Fluorescence-activated Cell Sorting for Giant Virus Mixture Separation.

B. La Scola, J. Bou Khalil, G. Oliveira, 2019, Journal of visualized experiments : JoVE.

Developmental Cycle and Genome Analysis of Protochlamydia massiliensis sp. nov. a New Species in the Parachlamydiacae Family

B. La Scola, J. Bou Khalil, M. Bilen, 2017, Front. Cell. Infect. Microbiol..

Protochlamydia phocaeensis sp. nov., a new Chlamydiales species with host dependent replication cycle.

D. Raoult, B. La Scola, J. Bou Khalil, 2017, Microbes and infection.

Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus

B. La Scola, T. Woyke, F. Schulz, 2020, mSystems.

High-throughput isolation of giant viruses using high-content screening

B. La Scola, J. Bou Khalil, Y. Ominami, 2019, Communications Biology.

Cedratvirus, a Double-Cork Structured Giant Virus, is a Distant Relative of Pithoviruses

D. Raoult, B. La Scola, P. Colson, 2016, Viruses.

A Rapid Strategy for the Isolation of New Faustoviruses from Environmental Samples Using Vermamoeba vermiformis.

D. Raoult, B. La Scola, J. Bou Khalil, 2016, Journal of Visualized Experiments.

High-throughput isolation of giant viruses using high-content screening

B. La Scola, J. Bou Khalil, Y. Ominami, 2019, Communications Biology.

High-Content Screening, a Reliable System for Coxiella burnetii Isolation from Clinical Samples

D. Raoult, P. Fournier, B. La Scola, 2020, Journal of Clinical Microbiology.

Escherichia coli-specific CXCL13-producing TFH are associated with clinical efficacy of neoadjuvant PD-1 blockade against muscle-invasive bladder cancer.

F. Ginhoux, L. Zitvogel, M. Merad, 2022, Cancer discovery.

Among Live and Dead Bacteria, the Optimization of Sample Collection and Processing Remains Essential in Recovering Gut Microbiota Components

D. Raoult, J. Bou Khalil, J. Lagier, 2019, Front. Microbiol..

Running after ghosts: are dead bacteria the dark matter of the human gut microbiota?

D. Raoult, A. Levasseur, J. Bou Khalil, 2021, Gut microbes.

Consanguinity-associated kidney diseases in Lebanon: an epidemiological study.

A. Barbari, A. Stephan, M. Masri, 2003, Molecular immunology.

Use of scanning electron microscopy and energy dispersive X-ray for urine analysis: A preliminary investigation.

G. Dubourg, J. Bou Khalil, J. Lagier, 2023, Microscopy research and technique.

Scanning Electron Microscope: A New Potential Tool to Replace Gram Staining for Microbe Identification in Blood Cultures

D. Raoult, J. Bou Khalil, S. Bellali, 2021, Microorganisms.

Multidisciplinary evaluation of Clostridium butyricum clonality isolated from preterm neonates with necrotizing enterocolitis in South France between 2009 and 2017

B. La Scola, P. Colson, A. Levasseur, 2019, Scientific Reports.

Draft genome and description of Chryseobacterium phocaeense sp. nov.: a new bacterial species isolated from the sputum of a cystic fibrosis patient

D. Raoult, P. Fournier, F. Bittar, 2019, Archives of Microbiology.

Ultrarapid diagnosis, microscope imaging, genome sequencing, and culture isolation of SARS-CoV-2

D. Raoult, B. La Scola, P. Colson, 2020, European Journal of Clinical Microbiology & Infectious Diseases.

Selenomonas felix sp. nov., a new bacterium isolated from human sputum

D. Raoult, J. Bou Khalil, J. Baudoin, 2019, New microbes and new infections.

Human Infection with Orf Virus and Description of Its Whole Genome, France, 2017

B. La Scola, P. Berbis, J. Bou Khalil, 2019, Emerging infectious diseases.

High-speed large-scale automated isolation of SARS-CoV-2 from clinical samples using miniaturized co-culture coupled to high-content screening

D. Raoult, B. La Scola, J. Bou Khalil, 2020, Clinical Microbiology and Infection.

Draft genome and description of Cohnella massiliensis sp. nov., a new bacterial species isolated from the blood culture of a hemodialysis patient

D. Raoult, P. Fournier, F. Bittar, 2019, Archives of Microbiology.

Prevotella marseillensis sp. nov., a new bacterium isolated from a patient with recurrent Clostridium difficile infection

D. Raoult, J. Bou Khalil, J. Baudoin, 2019, New microbes and new infections.

Urinicoccus massiliensis gen. nov., sp. nov., a new bacterium isolated from a human urine sample from a 7-year-old boy hospitalized for dental care

D. Raoult, J. Bou Khalil, J. Baudoin, 2019, New microbes and new infections.

Enterobacter timonensis sp. nov., a new bacterium isolated from a fresh human stool specimen

D. Raoult, J. Bou Khalil, A. Fadlane, 2019, New microbes and new infections.

Acidaminococcus provencensis sp. nov., a new bacterium isolated from a fresh human stool specimen

D. Raoult, J. Bou Khalil, A. Fadlane, 2019, New microbes and new infections.

Brachybacterium timonense sp. nov., a new bacterium isolated from human sputum

D. Raoult, J. Bou Khalil, J. Baudoin, 2019, New microbes and new infections.

Full-repertoire comparison of the microscopic objects composing the human gut microbiome with sequenced and cultured communities

D. Raoult, J. Bou Khalil, J. Baudoin, 2020, Journal of Microbiology.

Adapted Protocol for Saccharibacteria Cocultivation: Two New Members Join the Club of Candidate Phyla Radiation

D. Raoult, F. Bittar, J. Bou Khalil, 2021, bioRxiv.

Draft genome and description of Cohnella massiliensis sp. nov., a new bacterial species isolated from the blood culture of a hemodialysis patient

D. Raoult, P. Fournier, F. Bittar, 2019, Archives of Microbiology.

Dorea phocaeensis sp. nov., a new bacterium isolated from the stool of a healthy 29-year-old male

J. Bou Khalil, S. Naud, H. Anani, 2019, New microbes and new infections.

Enterococcus mediterraneensis sp. nov., a new bacterium isolated from the stool of a 39-year-old Pygmy

J. Bou Khalil, M. Bilen, H. Anani, 2019, New microbes and new infections.

Virgibacillusndiopensis sp. nov., a new halophilic bacterium isolated from the stool of a healthy 11-year-old boy

P. Fournier, B. Scola, J. Bou Khalil, 2019, New microbes and new infections.

High-Content Screening, a Reliable System for Coxiella burnetii Isolation from Clinical Samples

P. Fournier, B. La Scola, M. Mioulane, 2019, Journal of Clinical Microbiology.