Miho Hirai

发表

Quantitative Viral Community DNA Analysis Reveals the Dominance of Single-Stranded DNA Viruses in Offshore Upper Bathyal Sediment from Tohoku, Japan

Syun-ichi Urayama, Mitsuhiro Yoshida, Tomohiro Mochizuki, 2018, Front. Microbiol..

Variance and potential niche separation of microbial communities in subseafloor sediments off Shimokita Peninsula, Japan.

Miho Hirai, Y. Takaki, T. Nunoura, 2016, Environmental microbiology.

A Simple and Efficient RNA Extraction Method from Deep-Sea Hydrothermal Vent Chimney Structures

S. Sawayama, Sayaka Mino, Miho Hirai, 2017, Microbes and environments.

Deepest and hottest hydrothermal activity in the Okinawa Trough: the Yokosuka site at Yaeyama Knoll

Kentaro Nakamura, Chong Chen, H. Watanabe, 2017, Royal Society Open Science.

Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake

U. Tsunogai, Miho Hirai, Y. Takaki, 2012, Scientific Reports.

Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth

N. Yoshida, M. Sunamura, Miho Hirai, 2015, Proceedings of the National Academy of Sciences.

Molecular biological and isotopic biogeochemical prognoses of the nitrification-driven dynamic microbial nitrogen cycle in hadopelagic sediments.

Taishi Tsubouchi, Miho Hirai, T. Nunoura, 2013, Environmental microbiology.

Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages

C. Schleper, S. Abby, Melina Kerou, 2020, The ISME Journal.

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

S. Giovannoni, R. Stepanauskas, C. Carlson, 2020, mBio.

Pangenomics reveal diversification of enzyme families and niche specialization in globally abundant SAR202 bacteria

S. Giovannoni, R. Stepanauskas, C. Carlson, 2019, bioRxiv.

Library Construction from Subnanogram DNA for Pelagic Sea Water and Deep-Sea Sediments

M. Sunamura, Shinro Nishi, Miho Hirai, 2017, Microbes and environments.

Long-Term Cultivation and Metagenomics Reveal Ecophysiology of Previously Uncultivated Thermophiles Involved in Biogeochemical Nitrogen Cycle

Miho Hirai, K. Takai, E. Tasumi, 2018, Microbes and environments.

A single-molecule counting approach for convenient and ultrasensitive measurement of restriction digest efficiencies

D. Nishiura, Miho Hirai, T. Nunoura, 2020, PloS one.

Distribution and Niche Separation of Planktonic Microbial Communities in the Water Columns from the Surface to the Hadal Waters of the Japan Trench under the Eutrophic Ocean

T. Yokokawa, M. Sunamura, Yukari Yoshida-Takashima, 2016, Front. Microbiol..

The Intrapopulation Genetic Diversity of RNA Virus May Influence the Sensitivity of Chlorine Disinfection

D. Sano, S. Okabe, Osamu Nishimura, 2022, Frontiers in Microbiology.

In situ experimental evidences for responses of abyssal benthic biota to shifts in phytodetritus compositions linked to global climate change

R. Danovaro, C. Corinaldesi, E. Rastelli, 2021, Global change biology.

Metagenomic Analysis of Five Phylogenetically Distant Anammox Bacterial Enrichment Cultures

S. Okabe, Miho Hirai, Y. Takaki, 2022, Microbes and environments.

RNA Virosphere in a Marine Zooplankton Community in the Subtropical Western North Pacific

Syun-ichi Urayama, K. Nagasaki, Miho Hirai, 2022, Microbes and environments.

Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments

R. Danovaro, C. Corinaldesi, E. Rastelli, 2019, The ISME Journal.

Microbial Diversity in Sediments from the Bottom of the Challenger Deep, the Mariana Trench

T. Fukui, Miho Hirai, Y. Takaki, 2018, Microbes and environments.

Microbiota in the coelomic fluid of two common coastal starfish species and characterization of an abundant Helicobacter-related taxon

S. Sawayama, Miho Hirai, Y. Takaki, 2017, Scientific Reports.

Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount

Miho Hirai, A. Usui, Katsuhiko Suzuki, 2018, Microbes and environments.

Physiological and Genomic Features of a Novel Sulfur-Oxidizing Gammaproteobacterium Belonging to a Previously Uncultivated Symbiotic Lineage Isolated from a Hydrothermal Vent

Miho Hirai, Y. Takaki, T. Nunoura, 2014, PloS one.

Isolation and Characterization of a Thermophilic, Obligately Anaerobic and Heterotrophic Marine Chloroflexi Bacterium from a Chloroflexi-dominated Microbial Community Associated with a Japanese Shallow Hydrothermal System, and Proposal for Thermomarinilinea lacunofontalis gen. nov., sp. nov.

Y. Furushima, Hiroyuki Yamamoto, Miho Hirai, 2013, Microbes and environments.

Genome‐enabled metabolic reconstruction of dominant chemosynthetic colonizers in deep‐sea massive sulfide deposits

Miho Hirai, Y. Takaki, T. Nunoura, 2018, Environmental microbiology.

Bottleneck Size-Dependent Changes in the Genetic Diversity and Specific Growth Rate of a Rotavirus A Strain

D. Sano, O. Nishimura, S. Okabe, 2019, Journal of Virology.

Virus-Host Interactions Reveal Potential Roles Towards Phosphorus Cycling in South Atlantic Ocean Euphotic Zones

T. Yokokawa, J. Murrell, Miho Hirai, 2021 .

Diverse DNA modification in marine prokaryotic and viral communities

A. Toyoda, T. Yokokawa, Miho Hirai, 2021, bioRxiv.

Microbial metabolisms in an abyssal ferromanganese crust from the Takuyo-Daigo Seamount as revealed by metagenomics

M. Ohkuma, Miho Hirai, Katsuhiko Suzuki, 2019, PloS one.

Diversity in principal constituents of plants with a lemony scent and the predominance of citral

Miho Hirai, Michiho Ito, Yue Ota, 2021, Journal of natural medicines.

Nitrification-driven forms of nitrogen metabolism in microbial mat communities thriving along an ammonium-enriched subsurface geothermal stream

T. Yamanaka, N. Yoshida, Miho Hirai, 2013 .

Viral RNA Genomes Identified from Marine Macroalgae and a Diatom

K. Kimura, D. Hagiwara, Syun-ichi Urayama, 2020, Microbes and environments.

Microbial Diversity in Deep-sea Methane Seep Sediments Presented by SSU rRNA Gene Tag Sequencing

Miho Hirai, Y. Takaki, T. Nunoura, 2012, Microbes and environments.

Microbial Community Stratification Controlled by the Subseafloor Fluid Flow and Geothermal Gradient at the Iheya North Hydrothermal Field in the Mid-Okinawa Trough (Integrated Ocean Drilling Program Expedition 331)

M. Sunamura, Miho Hirai, Y. Takaki, 2014, Applied and Environmental Microbiology.

The first microbiological contamination assessment by deep-sea drilling and coring by the D/V Chikyu at the Iheya North hydrothermal field in the Mid-Okinawa Trough (IODP Expedition 331)

M. Mottl, K. Aoike, C. Moyer, 2013, Front. Microbiol..

Kosmotoga arenicorallina sp. nov. a thermophilic and obligately anaerobic heterotroph isolated from a shallow hydrothermal system occurring within a coral reef, southern part of the Yaeyama Archipelago, Japan, reclassification of Thermococcoides shengliensis as Kosmotoga shengliensis comb. nov., and

Y. Furushima, Hiroyuki Yamamoto, Miho Hirai, 2010, Archives of Microbiology.

Comparative Analysis of Microbial Communities in Iron-Dominated Flocculent Mats in Deep-Sea Hydrothermal Environments

Kentaro Nakamura, T. Yamanaka, Miho Hirai, 2016, Applied and Environmental Microbiology.

Defining boundaries for the distribution of microbial communities beneath the sediment-buried, hydrothermally active seafloor

M. Sunamura, Miho Hirai, Y. Takaki, 2016, The ISME Journal.

Domain-level identification and quantification of relative prokaryotic cell abundance in microbial communities by Micro-FTIR spectroscopy.

H. Ohta, M. Shimojima, Miho Hirai, 2012, Environmental microbiology reports.

Diverged and Active Partitiviruses in Lichen

D. Hagiwara, Syun-ichi Urayama, Miho Hirai, 2020, Frontiers in Microbiology.

A new polycipivirus identified in Colobopsis shohki

Syun-ichi Urayama, Miho Hirai, Y. Takaki, 2019, Archives of Virology.

RNA Viral Metagenome Analysis of Subnanogram dsRNA Using Fragmented and Primer Ligated dsRNA Sequencing (FLDS)

Syun-ichi Urayama, Miho Hirai, Y. Takaki, 2021, Microbes and environments.

Metabolic Potential of As-yet-uncultured Archaeal Lineages of Candidatus Hydrothermarchaeota Thriving in Deep-sea Metal Sulfide Deposits

Yohey Suzuki, M. Ohkuma, Miho Hirai, 2019, Microbes and environments.

Deep Subseafloor Biogeochemical Processes and Microbial Populations Potentially Associated with the 2011 Tohoku-oki Earthquake at the Japan Trench Accretionary Wedge (IODP Expedition 343)

N. Yoshida, Miho Hirai, Y. Takaki, 2023, Microbes and environments.

Heterogeneous Diazotroph Communities in the Subtropical‐Subantarctic Transition and Aphotic Zones Off the Coast of Patagonia, Eastern South Pacific Ocean

T. Shiozaki, Miho Hirai, T. Nunoura, 2023, Journal of Geophysical Research: Biogeosciences.