D. Burkepile

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Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

Jesse R. Zaneveld, C. Huttenhower, J. Clemente, 2013, Nature Biotechnology.

Herbivore species richness and feeding complementarity affect community structure and function on a coral reef

D. Burkepile, M. Hay, 2008, Proceedings of the National Academy of Sciences.

Increased temperature alters feeding behavior of a generalist herbivore

J. Parker, N. Lemoine, D. Burkepile, 2013 .

The role of predators in coral disease dynamics

B. Silliman, D. Burkepile, Julianna J. Renzi, 2022, Coral Reefs.

Identity of coral reef herbivores drives variation in ecological processes over multiple spatial scales.

D. Burkepile, B. Ruttenberg, T. Adam, 2019, Ecological applications : a publication of the Ecological Society of America.

Feeding complementarity versus redundancy among herbivorous fishes on a Caribbean reef

D. Burkepile, M. Hay, 2011, Coral Reefs.

Impact of Herbivore Identity on Algal Succession and Coral Growth on a Caribbean Reef

D. Burkepile, M. Hay, 2010, PloS one.

Local conditions magnify coral loss after marine heatwaves

J. Freiwald, T. Oliver, D. Burkepile, 2021, Science.

Nitrogen pollution interacts with heat stress to increase coral bleaching across the seascape

Russell J. Schmitt, Sally J. Holbrook, Thomas C. Adam, 2020, Proceedings of the National Academy of Sciences.

Differing nutritional constraints of consumers across ecosystems

N. Lemoine, D. Burkepile, S. Giery, 2013, Oecologia.

Herbivore vs. nutrient control of marine primary producers: context-dependent effects.

D. Burkepile, M. Hay, 2006, Ecology.

Comparing aquatic and terrestrial grazing ecosystems: is the grass really greener?

D. Burkepile, 2013 .

Differential herbivore occupancy of fire-manipulated savannas in the Satara region of the Kruger National Park, South Africa

A. Rebelo, B. Reilly, D. I. Thompson, 2020 .

Predator identity and time of day interact to shape the risk–reward trade-off for herbivorous coral reef fishes

K. Boswell, D. Burkepile, Laura B. Catano, 2016, Oecologia.

Nutrient supply from fishes facilitates macroalgae and suppresses corals in a Caribbean coral reef ecosystem

Jacob E. Allgeier, C. Layman, N. Lemoine, 2013, Scientific Reports.

Synthesizing the effects of large, wild herbivore exclusion on ecosystem function

J. Cushman, H. Young, T. Young, 2019, Functional Ecology.

Corallivory in the Anthropocene: Interactive Effects of Anthropogenic Stressors and Corallivory on Coral Reefs

L. Ezzat, D. Burkepile, Mallory M. Rice, 2019, Front. Mar. Sci..

Macroborer presence on corals increases with nutrient input and promotes parrotfish bioerosion

H. Moeller, N. Lemoine, A. Correa, 2020, Coral Reefs.

Recent advances in plant-herbivore interactions [version 1; peer review: 2 approved]

J. Parker, D. Burkepile, 2022 .

Integrating herbivore assemblages and woody plant cover in an African savanna to reveal how herbivores respond to ecosystem management

D. I. Thompson, D. Burkepile, M. Donovan, 2022, PloS one.

Ecology: E-rat-ication to restore reefs

D. Burkepile, 2021, Current Biology.

Functional diversity in herbivorous fishes on Caribbean reefs: The role of macroalgal traits in driving interspecific differences in feeding behavior

Jacob E. Allgeier, D. Burkepile, T. Adam, 2022, Food Webs.

Interactive effects of herbivory and substrate orientation on algal community dynamics on a coral reef

L. Collado-Vides, D. Burkepile, A. Duran, 2018, Marine Biology.

Fishing, pollution, climate change, and the long-term decline of coral reefs off Havana, Cuba

L. Collado-Vides, D. Burkepile, A. Duran, 2017 .

Nutrient versus herbivore control of macroalgal community development and coral growth on a Caribbean reef

D. Burkepile, M. Hay, 2009 .

Comparative analysis of foraging behavior and bite mechanics reveals complex functional diversity among Caribbean parrotfishes

D. Burkepile, B. Ruttenberg, T. Adam, 2018, Marine Ecology Progress Series.

Positive interactions between corals and damselfish increase coral resistance to temperature stress

S. Holbrook, R. J. Schmitt, L. Ezzat, 2022, Global change biology.

Species-specific patterns in corallivory and spongivory among Caribbean parrotfishes

D. Burkepile, B. Ruttenberg, T. Adam, 2019, Coral Reefs.

Sediment associated with algal turfs inhibits the settlement of two endangered coral species.

D. Burkepile, M. Miller, Margaret W. Miller, 2019, Marine pollution bulletin.

Few Herbivore Species Consume Dominant Macroalgae on a Caribbean Coral Reef

D. Burkepile, G. O. Longo, C. Manfrino, 2020, Frontiers in Marine Science.

Interactive effects of herbivory and substrate orientation on algal community dynamics on a coral reef

L. Collado-Vides, D. Burkepile, A. Duran, 2018, Marine Biology.

Estimates of fish and coral larvae as nutrient subsidies to coral reef ecosystems

Jacob E. Allgeier, D. Burkepile, Kelly E. Speare, 2018, Ecosphere.

Programmable Autonomous Water Samplers (PAWS): An inexpensive, adaptable and robust submersible system for time-integrated water sampling in freshwater and marine ecosystems

D. Burkepile, H. Yoo, K. Neumann, 2022, HardwareX.

Loss of a single large grazer impacts savanna grassland plant communities similarly in North America and South Africa

K., S. Collins, A. Knapp, 2020 .

Herbivore size matters for productivity–richness relationships in African savannas

S. Collins, A. Knapp, Melinda D. Smith, 2017 .

Loss of a large grazer impacts savanna grassland plant communities similarly in North America and South Africa

S. Collins, A. Knapp, Melinda D. Smith, 2014, Oecologia.

A global analysis of coral bleaching over the past two decades

D. Burkepile, M. Donovan, R. van Woesik, 2019, Nature Communications.

Thermal Stress Interacts With Surgeonfish Feces to Increase Coral Susceptibility to Dysbiosis and Reduce Tissue Regeneration

L. Ezzat, D. Burkepile, R. V. Vega Thurber, 2021, Frontiers in Microbiology.

Macroalgae Decrease Growth and Alter Microbial Community Structure of the Reef-Building Coral, Porites astreoides

A. Thurber, A. Correa, D. Burkepile, 2012, PloS one.

Variable effects of temperature on insect herbivory

J. Parker, N. Lemoine, D. Burkepile, 2014, PeerJ.

Nutrient Pollution and Predation Differentially Affect Innate Immune Pathways in the Coral Porites porites

D. Burkepile, R. V. Vega Thurber, M. Rodriguez-Lanetty, 2020, Frontiers in Marine Science.

Complex interactions with nutrients and sediment alter the effects of predation on a reef‐building coral

D. Burkepile, Mallory M. Rice, Corinne Fuchs, 2021 .

Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching

Jesse R Zaneveld, Jesse R. Zaneveld, Andrew A Shantz, 2014, Global change biology.

Coral epigenetic responses to nutrient stress: Histone H2A.X phosphorylation dynamics and DNA methylation in the staghorn coral Acropora cervicornis

J. Ausió, Bohyun Kim, D. Burkepile, 2018, Ecology and evolution.

Phylogenetic conservatism drives nutrient dynamics of coral reef fishes

Jacob E. Allgeier, V. Parravicini, S. Wenger, 2021, Nature Communications.

Nutrient limitation, bioenergetics and stoichiometry: A new model to predict elemental fluxes mediated by fishes

Jacob E. Allgeier, Diego R. Barneche, S. Brandl, 2020, Functional Ecology.

Fish-derived nutrient hotspots shape coral reef benthic communities.

Mark C Ladd, Andrew A Shantz, D. Burkepile, 2015, Ecological applications : a publication of the Ecological Society of America.

Nitrogen Identity Drives Differential Impacts of Nutrients on Coral Bleaching and Mortality

S. Holbrook, R. J. Schmitt, J. Wong, 2019, Ecosystems.

Stream mosses as chemically‐defended refugia for freshwater macroinvertebrates

J. Kubanek, J. Parker, D. Burkepile, 2007 .

Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov

R. V. Thurber, B. Silliman, J. G. Klinges, 2019, The ISME Journal.

The Long Arm of Species Loss: How Will Defaunation Disrupt Ecosystems Down to the Microbial Scale?

R. V. Thurber, D. Burkepile, 2019, BioScience.

Susceptibility of Five Nontarget Organisms to Aqueous Diazinon Exposure

M. Moore, M. M. Holland, D. Burkepile, 2000, Bulletin of environmental contamination and toxicology.

Herbivory and the Resilience of Caribbean Coral Reefs: Knowledge Gaps and Implications for Management

D. Burkepile, B. Ruttenberg, T. Adam, 2015 .

Species-specific patterns in corallivory and spongivory among Caribbean parrotfishes

D. Burkepile, B. Ruttenberg, T. Adam, 2019, Coral Reefs.

Separate and Interactive Effects of Consumers and Nutrient Enrichment on the Structure of Benthic Marine Communities

D. Burkepile, 2006 .

Predation Risk, Resource Quality, and Reef Structural Complexity Shape Territoriality in a Coral Reef Herbivore

Bridgette K. Gunn, D. Burkepile, Deron E. Burkepile, 2015, PloS one.

Seasonal recruitment and survival strategies of Palisada cervicornis comb. nov. (Ceramiales, Rhodophyta) in coral reefs

L. Collado-Vides, D. Burkepile, M. Fujii, 2017, Journal of phycology.

Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef

L. Collado-Vides, D. Burkepile, A. Duran, 2016, PeerJ.

Effects of predation and nutrient enrichment on the success and microbiome of a foundational coral.

B. Silliman, Ryan McMinds, D. Burkepile, 2017, Ecology.

Resource partitioning along multiple niche axes drives functional diversity in parrotfishes on Caribbean coral reefs

D. Burkepile, B. Ruttenberg, T. Adam, 2015, Oecologia.

Mutualisms and aquatic community structure: The enemy of my enemy is my friend

Alan E. Wilson, Zachary P. Hallinan, J. Parker, 2004 .

A Vicious Circle? Altered Carbon and Nutrient Cycling May Explain the Low Resilience of Caribbean Coral Reefs

R. V. Thurber, D. Burkepile, J. Pawlik, 2016 .

Near‐term impacts of coral restoration on target species, coral reef community structure, and ecological processes

D. Burkepile, A. A. Shantz, Mark C. Ladd, 2019, Restoration Ecology.

Reefscapes of fear: predation risk and reef hetero-geneity interact to shape herbivore foraging behaviour.

M. Heithaus, D. Burkepile, J. Fourqurean, 2016, The Journal of animal ecology.

Coral Microbiomes Demonstrate Flexibility and Resilience Through a Reduction in Community Diversity Following a Thermal Stress Event

S. Holbrook, R. J. Schmitt, Ryan McMinds, 2020, Frontiers in Ecology and Evolution.

Corals and Their Microbiomes Are Differentially Affected by Exposure to Elevated Nutrients and a Natural Thermal Anomaly

T. Sharpton, J. Payet, Lu Wang, 2018, Front. Mar. Sci..

Unprecedented evidence for high viral abundance and lytic activity in coral reef waters of the South Pacific Ocean

J. Payet, Ryan McMinds, D. Burkepile, 2014, Front. Microbiol..

Different nitrogen sources speed recovery from corallivory and uniquely alter the microbiome of a reef-building coral

D. Burkepile, R. V. Vega Thurber, Mallory M. Rice, 2019, PeerJ.

Chemically mediated competition between microbes and animals: microbes as consumers in food webs.

J. Kubanek, J. Parker, P. Sobecky, 2006, Ecology.

Bacterial predation in a marine host-associated microbiome

Jesse R. Zaneveld, R. V. Thurber, J. Payet, 2015, The ISME Journal.

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

Jesse R. Zaneveld, R. V. Thurber, J. Payet, 2016, Nature Communications.

Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome

Ryan McMinds, D. Burkepile, R. V. Vega Thurber, 2019, Scientific Reports.

Isolation of an antifreeze peptide from the Antarctic sponge Homaxinella balfourensis

A. Wierzbicki, M. Hamann, D. Burkepile, 2002, Cellular and Molecular Life Sciences CMLS.

Plant community response to loss of large herbivores differs between North American and South African savanna grasslands.

S. Collins, A. Knapp, Melinda D. Smith, 2014, Ecology.

A test of two mechanisms proposed to optimize grassland aboveground primary productivity in response to grazing

Alan K. Knapp, Scott L. Collins, Navashni Govender, 2012 .

Response to Comment on "Opposing Effects of Native and Exotic Herbivores on Plant Invasions"

J. Parker, D. Burkepile, M. Hay, 2006, Science.

Habitat selection by large herbivores in a southern African savanna : the relative roles of bottom-up and top-down forces

Craig J. Tambling, Melinda D. Smith, D. I. Thompson, 2013 .

Why do certain species dominate? What we can learn from a rare case of Microdictyon dominance on a Caribbean reef

D. Burkepile, G. O. Longo, C. Manfrino, 2020 .

Overfishing and the ecological impacts of extirpating large parrotfish from Caribbean coral reefs

D. Burkepile, A. A. Shantz, Mark C. Ladd, 2020 .

Phylogenetic isolation increases plant success despite increasing susceptibility to generalist herbivores

J. Parker, D. Burkepile, E. Lind, 2012 .

success despite increasing susceptibility to generalist herbivores

J. Parker, D. Burkepile, E. Lind, 2012 .

Context-dependent effects of nutrient loading on the coral-algal mutualism.

D. Burkepile, A. A. Shantz, 2014, Ecology.

Opposing Effects of Native and Exotic Herbivores on Plant Invasions

J. Parker, D. Burkepile, M. Hay, 2006, Science.

Local management actions can increase coral resilience to thermally-induced bleaching

B. Silliman, D. Burkepile, Elizabeth C. Shaver, 2018, Nature Ecology & Evolution.

A global analysis of coral bleaching over the past two decades

D. Burkepile, M. Donovan, R. van Woesik, 2019, Nature Communications.

Landscape-scale patterns of nutrient enrichment in a coral reef ecosystem: implications for coral to algae phase shifts.

S. Holbrook, R. J. Schmitt, L. Washburn, 2020, Ecological applications : a publication of the Ecological Society of America.

Intestinal microbes: an axis of functional diversity among large marine consumers

D. Burkepile, D. Rasher, J. Scott, 2020, Proceedings of the Royal Society B.

Nutrient loading alters the performance of key nutrient exchange mutualisms.

Andrew A Shantz, N. Lemoine, D. Burkepile, 2016, Ecology letters.

Biological trade-offs underpin coral reef ecosystem functioning

Jacob E. Allgeier, Diego R. Barneche, S. Brandl, 2022, Nature Ecology & Evolution.

Insect herbivores increase mortality and reduce tree seedling growth of some species in temperate forest canopy gaps

J. Parker, N. Lemoine, D. Burkepile, 2017, PeerJ.

Fire frequency drives habitat selection by a diverse herbivore guild impacting top–down control of plant communities in an African savanna

S. Collins, A. Knapp, Melinda D. Smith, 2016 .

Loss of a large grazer impacts savanna grassland plant communities similarly in North America and South Africa

S. Collins, A. Knapp, Melinda D. Smith, 2014, Oecologia.

Recent advances in plant-herbivore interactions

J. Parker, D. Burkepile, 2017, F1000Research.

Shared Drivers but Divergent Ecological Responses: Insights from Long-Term Experiments in Mesic Savanna Grasslands

J. Blair, S. Collins, A. Knapp, 2016 .

Parrotfish predation drives distinct microbial communities in reef-building corals

L. Ezzat, D. Burkepile, R. V. Vega Thurber, 2020, Animal microbiome.

Animal pee in the sea: consumer‐mediated nutrient dynamics in the world's changing oceans

Jacob E. Allgeier, C. Layman, D. Burkepile, 2017, Global change biology.

Temperature-induced mismatches between consumption and metabolism reduce consumer fitness.

N. Lemoine, D. Burkepile, 2012, Ecology.

Nitrate enrichment has lineage specific effects on Pocillopora acuta adults, but no transgenerational effects in planulae

A. Correa, L. Howe-Kerr, D. Burkepile, 2022, Coral Reefs.

Harnessing ecological processes to facilitate coral restoration

D. Burkepile, M. Miller, J. Hunt, 2018 .

Density Dependence Drives Habitat Production and Survivorship of Acropora cervicornis Used for Restoration on a Caribbean Coral Reef

D. Burkepile, A. A. Shantz, K. Nedimyer, 2016, Front. Mar. Sci..

Chronic low-level nutrient enrichment benefits coral thermal performance in a fore reef habitat

H. Putnam, D. Burkepile, R. V. Vega Thurber, 2021, Coral Reefs.

Change in dominance determines herbivore effects on plant biodiversity

Meghan L. Avolio, Kathryn A. Schoenecker, T. M. Anderson, 2018, Nature Ecology & Evolution.

Size‐dependent mortality of corals during marine heatwave erodes recovery capacity of a coral reef

H. Lenihan, D. Burkepile, T. Adam, 2021, Global change biology.

Newly dominant benthic invertebrates reshape competitive networks on contemporary Caribbean reefs

D. Burkepile, A. A. Shantz, Mark C. Ladd, 2019, Coral Reefs.

Thermal stress reveals a genotype-specific tradeoff between growth and tissue loss in restored Acropora cervicornis

D. Burkepile, E. Bartels, A. A. Shantz, 2017 .

A comparison of diver vs. acoustic methodologies for surveying fishes in a shallow water coral reef ecosystem

K. Boswell, D. Burkepile, A. Zenone, 2017 .

Context-dependent corallivory by parrotfishes in a Caribbean reef ecosystem

D. Burkepile, 2011, Coral Reefs.

Climate and fishing drive regime shifts in consumer‐mediated nutrient cycling in kelp forests

D. Reed, D. Burkepile, J. R. Peters, 2019, Global change biology.

Saturation Diving and Underwater Laboratories: How Underwater Technology Has Aided Research on Coral Biology and Reef Ecology

K. Sebens, G. Bernardi, D. Burkepile, 2013 .

Quantifying Differences Between Native and Introduced Species.

J. Parker, N. Lemoine, D. Burkepile, 2016, Trends in ecology & evolution.

Feeding behavior in Caribbean surgeonfishes varies across fish size, algal abundance, and habitat characteristics

L. Collado-Vides, D. Burkepile, T. Adam, 2019, Marine Ecology.

Predation risk, competition, and territorial damselfishes as drivers of herbivore foraging on Caribbean coral reefs

D. Burkepile, A. A. Shantz, Laura B. Catano, 2014 .

Algal nitrogen and phosphorus content drive inter- and intraspecific differences in herbivore grazing on a Caribbean reef

D. Burkepile, A. A. Shantz, Mark C. Ladd, 2017 .

Responses of plant phenology, growth, defense, and reproduction to interactive effects of warming and insect herbivory.

J. Parker, N. Lemoine, J. Salminen, 2017, Ecology.

Context-dependent corallivory by parrotfishes in a Caribbean reef ecosystem

D. Burkepile, 2012, Coral Reefs.

Corallivory varies with water depth to influence the growth of Acropora hyacinthus , a reef‐forming coral

H. Lenihan, D. Burkepile, Mark C. Ladd, 2021, Ecosphere.

Shared Insights across the Ecology of Coral Reefs and African Savannas: Are Parrotfish Wet Wildebeest?

D. I. Thompson, D. Burkepile, M. Donovan, 2020 .

Rapid recovery of ecosystem function following extreme drought in a South African savanna-grassland.

Ava M. Hoffman, S. Collins, A. Knapp, 2020, Ecology.

Responses to fire differ between South African and North American grassland communities

Alan K. Knapp, Dave I. Thompson, Scott L. Collins, 2014 .

Surgeonfish feces increase microbial opportunism in reef-building corals

R. V. Thurber, Christopher A. Gaulke, L. Ezzat, 2019 .

Macroborer presence on corals increases with nutrient input and promotes parrotfish bioerosion

H. Moeller, N. Lemoine, A. Correa, 2020, Coral Reefs.

Groups of roving midnight parrotfish (Scarus coelestinus) prey on sergeant major damselfish (Abudefduf saxatilis) nests

D. Burkepile, B. Ruttenberg, T. Adam, 2017, Marine Biodiversity.

Managing herbivores for their impacts on Caribbean coral reef ecosystems : a summary report for managers and practitioners

D. Burkepile, B. Ruttenberg, T. Adam, 2015 .

Fish feces reveal diverse nutrient sources for coral reefs.

S. Brandl, V. Parravicini, E. Eliason, 2023, Ecology.

The importance of individual and species-level traits for trophic niches among herbivorous coral reef fishes

Jacob E. Allgeier, D. Burkepile, T. Adam, 2017, Proceedings of the Royal Society B: Biological Sciences.

The role of fish feces for nutrient cycling on coral reefs

S. Brandl, V. Parravicini, A. Mercière, 2023, Oikos.

Publisher Correction: Local management actions can increase coral resilience to thermally-induced bleaching

B. Silliman, D. Burkepile, Elizabeth C. Shaver, 2018, Nature Ecology & Evolution.

Predator release of the gastropod Cyphoma gibbosum increases predation on gorgonian corals

D. Burkepile, M. Hay, 2007, Oecologia.

Correction: Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov

R. V. Thurber, B. Silliman, J. G. Klinges, 2019, The ISME Journal.

Controls of Aboveground Net Primary Production in Mesic Savanna Grasslands: An Inter-Hemispheric Comparison

Alan K. Knapp, Scott L. Collins, Navashni Govender, 2009, Ecosystems.

A View From Both Ends: Shifts in Herbivore Assemblages Impact Top-Down and Bottom-Up Processes on Coral Reefs

Jacob E. Allgeier, D. Burkepile, Katrina S. Munsterman, 2021, Ecosystems.

Functional variation among parrotfishes: are they complementary or redundant?

D. Burkepile, M. Hay, A. Hoey, 2018 .

Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome

Ryan McMinds, D. Burkepile, Mallory M. Rice, 2019, Scientific Reports.

Nutrient loading alters the performance of key nutrient exchange mutualisms.

N. Lemoine, D. Burkepile, A. A. Shantz, 2016, Ecology letters.

Local management actions can increase coral resilience to thermally-induced bleaching

B. Silliman, D. Burkepile, Elizabeth C. Shaver, 2018, Nature Ecology & Evolution.

Change in dominance determines herbivore effects on plant biodiversity

Meghan L. Avolio, Kathryn A. Schoenecker, T. M. Anderson, 2018, Nature Ecology & Evolution.

STRUCTURE: The Enemy of My Enemy is My Friend

Alan E. Wilson, Zachary P. Hallinan, J. Parker, 2004 .

Despite plasticity, heatwaves are costly for a coral reef fish

E. Hardison, D. Burkepile, Kaitlyn Landfield, 2024, Scientific reports.

Grazing herbivores reduce herbaceous biomass and fire activity across African savannas.

Lauren M. Porensky, J. Goheen, D. Burkepile, 2024, Ecology letters.

Corals survive severe bleaching event in refuges related to taxa, colony size, and water depth

James L. Hench, H. Lenihan, D. Burkepile, 2024, Scientific reports.