K. Cole

发表

Severe infections emerge from the microbiome by adaptive evolution

Daniel J. Wilson, Z. Iqbal, Chieh-Hsi Wu, 2017, bioRxiv.

Adjunctive rifampicin for Staphylococcus aureus bacteraemia (ARREST): a multicentre, randomised, double-blind, placebo-controlled trial

Scott A. Prentice, Tom Michael Mitchell, Deborah A. Gilliam, 2017 .

Whole-genome sequencing to determine transmission of Neisseria gonorrhoeae: an observational study.

Daniel J. Wilson, John Paul, Xavier Didelot, 2016, The Lancet. Infectious diseases.

Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing

Daniel J. Wilson, R. Everitt, A. Walker, 2014, Journal of Clinical Microbiology.

Antimicrobial resistance determinants are associated with Staphylococcus aureus bacteraemia and adaptation to the healthcare environment: a bacterial genome-wide association study

Daniel J. Wilson, Chieh-Tsai Wu, A. Walker, 2021, medRxiv.

Hospital outbreak of carbapenem-resistant Enterobacterales associated with a bla OXA-48 plasmid carried mostly by Escherichia coli ST399

X. Didelot, J. Paul, N. Stoesser, 2020, bioRxiv.

Robust Prediction of Resistance to Trimethoprim in Staphylococcus aureus.

T. Peto, D. Crook, N. Gordon, 2018, Cell chemical biology.

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study

Thomas R Rogers, Sarah Wordsworth, Stefan Niemann, 2016, The Lancet. Respiratory medicine.

Ethnically diverse urban transmission networks of Neisseria gonorrhoeae without evidence of HIV serosorting

D. Eyre, J. Paul, R. Stabler, 2019, Sexually Transmitted Infections.

1 Re-emergence of methicillin susceptibility in a resistant lineage of Staphylococcus 1 aureus 2 3

X. Didelot, D. Crook, A. Kearns, 2019 .

Re-emergence of methicillin susceptibility in a resistant lineage of Staphylococcus 1 2

X. Didelot, D. Crook, A. Kearns, 2016 .

Genomic investigation of clinically significant coagulase-negative staphylococci.

J. Paul, K. Cole, M. Llewelyn, 2021, Journal of medical microbiology.

SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway

William T. Harvey, Scott M Elliott, Robert M. Davies, 2022, Nature Microbiology.

Optimizing DNA extraction methods for Nanopore sequencing of Neisseria gonorrhoeae direct from urine samples

J. O’Grady, D. Crook, T. Street, 2019, bioRxiv.

Undetected carriage explains apparent Staphylococcus aureus acquisition in a non-outbreak healthcare setting.

D. Crook, S. Waddell, J. Paul, 2021, The Journal of infection.

RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates

Tatum D. Mortimer, Y. Grad, S. Walker, 2019, bioRxiv.

Whole-Genome Sequencing Shows That Patient-to-Patient Transmission Rarely Accounts for Acquisition of Staphylococcus aureus in an Intensive Care Unit

Daniel J. Wilson, T. Peto, D. Crook, 2013, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Molecular Diagnosis of Orthopedic-Device-Related Infection Directly from Sonication Fluid by Metagenomic Sequencing

T. Peto, D. Crook, T. Street, 2017, Journal of Clinical Microbiology.

Molecular diagnosis of orthopaedic device infection direct from sonication fluid by metagenomic sequencing

T. Peto, D. Crook, T. Street, 2017, bioRxiv.

Genomic analysis of urogenital and rectal Neisseria meningitidis isolates reveals encapsulated hyperinvasive meningococci and coincident multidrug-resistant gonococci

M. Maiden, D. Eyre, J. Paul, 2017, Sexually Transmitted Infections.

Transmission of Staphylococcus aureus between health-care workers, the environment, and patients in an intensive care unit: a longitudinal cohort study based on whole-genome sequencing

John Paul, Tanya Golubchik, Daniel J Wilson, 2017, The Lancet. Infectious diseases.

Severe infections emerge from commensal bacteria by adaptive evolution

Zamin Iqbal, John Paul, Tanya Golubchik, 2017, eLife.

Whole genome sequencing of Neisseria gonorrhoeae reveals transmission clusters involving patients of mixed HIV serostatus

John Paul, Xavier Didelot, Joanna Peters, 2017, Sexually Transmitted Infections.

WGS to predict antibiotic MICs for Neisseria gonorrhoeae

Yonatan H. Grad, John Paul, David W. Eyre, 2017, The Journal of antimicrobial chemotherapy.

Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway

William T. Harvey, Scott M Elliott, Robert M. Davies, 2022, Nature Microbiology.

Whole-genome sequencing to determine Neisseria gonorrhoeae transmission: an observational study

Daniel J. Wilson, Y. Grad, X. Didelot, 2016 .

Robust Prediction of Resistance to Trimethoprim in Staphylococcus aureus.

T. Peto, D. Crook, N. Gordon, 2018, Cell chemical biology.

Draft Genome Sequences of 64 Type Strains of 50 Species and 25 Subspecies of the Genus Staphylococcus Rosenbach 1884

Daniel J. Wilson, D. Crook, D. Wilson, 2019, Microbiology Resource Announcements.

Re-emergence of methicillin susceptibility in a resistant lineage of Staphylococcus aureus

X. Didelot, D. Crook, A. Kearns, 2017, The Journal of antimicrobial chemotherapy.

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation

Daniel J. Wilson, J. Q. Nash, A. Walker, 2017, Journal of Clinical Microbiology.

Transmission of Staphylococcus aureus between health-care workers, the environment, and patients in an intensive care unit: a longitudinal cohort study based on whole-genome sequencing

Daniel J. Wilson, T. Peto, D. Crook, 2021 .

Transmission of Staphylococcus aureus between health-care workers, the environment, and patients in an intensive care unit: a longitudinal cohort study based on whole-genome sequencing

Daniel J. Wilson, T. Peto, D. Crook, 2017 .

Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples

J. O’Grady, D. Crook, T. Street, 2019, Journal of Clinical Microbiology.

Severe infections emerge from commensal bacteria by adaptive evolution

Z. Iqbal, Chieh-Hsi Wu, T. Peto, 2017, eLife.

Adjunctive rifampicin for Staphylococcus aureus bacteraemia (ARREST): a multicentre, randomised, double-blind, placebo-controlled trial

Scott A. Prentice, Tom Michael Mitchell, Deborah A. Gilliam, 2018, Lancet.

Transmission of Staphylococcus aureus between healthcare workers, the environment and patients in an intensive care unit: a whole-genome sequencing based longitudinal cohort study

Daniel J. Wilson, T. Peto, D. Crook, 2017 .