Sun Kim

发表

Genome Sequencing Technology and Algorithms

E. Mardis, Haixu Tang, Sun Kim, 2007 .

De novo identification of LTR retrotransposons in eukaryotic genomes

M. Lynch, Haixu Tang, Jeong-Hyeon Choi, 2007, BMC Genomics.

VLabProtein:VirtualCollaborativeLabforProtei nSequenceAnalysis

Dennis Gannon, Sun Kim, J. Choi, 2007 .

Comparative analysis using K-mer and K-flank patterns provides evidence for CpG island sequence evolution in mammalian genomes

Seong-Whan Lee, K. Nephew, Sun Kim, 2013, Nucleic acids research.

Building interacting partner predictors using co‐varying residue pairs between histidine kinase and response regulator pairs of 48 bacterial two‐component systems

Sun Kim, Kwangmin Choi, 2011, Proteins.

New anti-cancer strategies: epigenetic therapies and biomarkers.

K. Nephew, T. Huang, C. Balch, 2005, Frontiers in bioscience : a journal and virtual library.

1 BAG : A Graph Theoretic Sequence Clustering Algorithm ( An Extended Abstract )

Sun Kim, 2002 .

Gene Cluster Profile Vectors: a method to infer functionally related gene sets by grouping proximity-based gene clusters

Sun Kim, V. Pejaver, 2011, BMC Genomics.

Comparative Genome Annotation Systems

Sun Kim, Kwangmin Choi, 2008 .

Computational approaches for genome assembly validation

Mihai Pop, Haixu Tang, Sun Kim, 2009 .

LTR retroelements in the genome of Daphnia pulex

Haixu Tang, Mina Rho, Michael Lynch, 2010, BMC Genomics.

Advanced Signal Processing Techniques for Bioinformatics

Vladimir Pavlovic, David Casasent, Sun Kim, 2006, EURASIP Journal on Advances in Signal Processing.

CGAS: a comparative genome annotation system.

Sun Kim, Kwangmin Choi, Youngik Yang, 2007, Methods in molecular biology.

Protecting Youth from Themselves in the Media: The Right to Be Forgotten

Sun Kim, 2016 .

2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009: Preface

Cathy H. Wu, Dong Xu, Sun Kim, 2009 .

BioVLAB-Microarray: Microarray Data Analysis in Virtual Environment

Marlon E. Pierce, Dennis Gannon, Youngik Yang, 2008, 2008 IEEE Fourth International Conference on eScience.

dPattern: transcription factor binding site (TFBS) discovery in human genome using a discriminative pattern analysis

Jing Wu, Haixu Tang, Jun Xie, 2007, Bioinform..

Independent Mammalian Genome Contractions Following the KT Boundary

M. Lynch, Haixu Tang, Mina Rho, 2009, Genome biology and evolution.

Annotation confidence score for genome annotation: a genome comparison approach

Youngik Yang, Sun Kim, Donald Gilbert, 2010, Bioinform..

MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression

Curtis Balch, Kenneth P. Nephew, Meng Li, 2009, Nucleic Acids Res..

Diversification of non-TIR class NB-LRR genes in relation to whole-genome duplication events in Arabidopsis.

Sun Kim, T. Ashfield, K. Nobuta, 2005, Molecular plant-microbe interactions : MPMI.

An Approximate de Bruijn Graph Approach to Multiple Local Alignment and Motif Discovery in Protein Sequences

Mehmet M. Dalkilic, Haixu Tang, Sun Kim, 2006, VDMB.

Genome Comparisons Based on Profiles of Metabolic Pathways

Li Liao, Jean-Francois Tomb, J. Tomb, 2002 .

EGGSlicer: predicting biologically meaningful gene sets from gene clusters using gene ontology information

Heejoon Chae, Sun Kim, Kwangmin Choi, 2010, BCB '10.

A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-alpha

Wei Zhang, Curtis Balch, Alfred S. L. Cheng, 2006, Bioinform..

REFINEMENT: A search framework for the identification of interferon-responsive elements in DNA sequences - a case study with ISRE and GAS

Sun Kim, Takuma Tsukahara, Milton W. Taylor, 2006, Comput. Biol. Chem..

GAME: A simple and efficient whole genome alignment method using maximal exact match filtering

Hwan-Gue Cho, Sun Kim, Jeong-Hyeon Choi, 2005, Comput. Biol. Chem..

Metabolic flexibility revealed in the genome of the cyst-forming α-1 proteobacterium Rhodospirillum centenum

Paul Stothard, Jeffrey W Touchman, Yih-Kuang Lu, 2010, BMC Genomics.

Graph Theoretic Sequence Clustering Algorithms and Their Applications to Genome Comparison

Sun Kim, Sun Kim, Sun Kim, 2003, Computational Biology and Genome Informatics.

Sequence-Based Enzyme Catalytic Domain Prediction Using Clustering and Aggregated Mutual Information Content

Sun Kim, Kwangmin Choi, Sun Kim, 2011, 2011 IEEE First International Conference on Healthcare Informatics, Imaging and Systems Biology.

A Study of Residue Correlation within Protein Sequences and Its Application to Sequence Classification

Sun Kim, Christopher Michael Hemmerich, Sun Kim, 2007, EURASIP J. Bioinform. Syst. Biol..

Gene teams with relaxed proximity constraint

Jiong Yang, Sun Kim, Jeong-Hyeon Choi, 2005, 2005 IEEE Computational Systems Bioinformatics Conference (CSB'05).

BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data

Kenneth P. Nephew, Heejoon Chae, Sun Kim, 2015, Bioinform..

A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-a

Henry H. Paik, Wei Zhang, K. Nephew, 2006 .

De novo identification of LTR retrotransposons in eukaryotic genomes

M. Lynch, Haixu Tang, Jeong-Hyeon Choi, 2007, BMC Genomics.

BAG: a graph theoretic sequence clustering algorithm

Jason Lee, Sun Kim, Sun Kim, 2006, Int. J. Data Min. Bioinform..

A machine-learning approach to combined evidence validation of genome assemblies

Haixu Tang, Sun Kim, Jeong-Hyeon Choi, 2008, Bioinform..

Bioinformatics: Mining the Massive Data from High Throughput Genomics Experiments

Haixu Tang, Sun Kim, Haixu Tang, 2007, Analysis of Biological Data: A Soft Computing Approach.

ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts

Sun Kim, Kwangmin Choi, Sun Kim, 2008, BMC Bioinformatics.

EGGS: Extraction of Gene Clusters Using Genome Context Based Sequence Matching Techniques

Sun Kim, Kwangmin Choi, Ankita Bhan, 2007, 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007).

iGibbs: Improving Gibbs motif sampler for proteins by sequence clustering and iterative pattern sampling

Sun Kim, Zhiping Wang, Mehmet Dalkilic, 2006, Proteins.

Carrie James: Disconnected: Youth, New Media, and the Ethics Gap

Sun Kim, 2015 .

A machine-learning approach to combined evidence validation of genome assemblies

Haixu Tang, Jeong-Hyeon Choi, J. Colbourne, 2008, Bioinform..

A hybrid gene team model and its application to genome analysis.

Amit Saple, Jeong-Hyeon Choi, Sun Kim, 2006, Journal of bioinformatics and computational biology.

Sequence analysis ARCS : an aggregated related column scoring scheme for aligned sequences

A. Tung, Jaewoo Kang, Guo-Qiang Zhang, 2006 .

BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data

K. Nephew, Sun Kim, SungMin Rhee, 2015, Bioinform..