H. J. Tripp

发表

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

M. Noordewier, S. Giovannoni, S. Givan, 2005, Science.

SAR11 marine bacteria require exogenous reduced sulphur for growth

S. Giovannoni, L. Wilhelm, J. Dacey, 2008, Nature.

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2015, Standards in Genomic Sciences.

Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016, Standards in genomic sciences.

The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016, Standards in Genomic Sciences.

Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation

N. Kyrpides, Konstantinos Billis, K. Mavromatis, 2014, PloS one.

nifH pyrosequencing reveals the potential for location-specific soil chemistry to influence N2 -fixing community dynamics.

Jonathan P Zehr, J. Zehr, H. J. Tripp, 2014, Environmental microbiology.

The unique metabolism of SAR11 aquatic bacteria

H. J. Tripp, 2013, Journal of Microbiology.

A microarray for assessing transcription from pelagic marine microbial taxa

Rhona K. Stuart, D. Scanlan, A. Post, 2014, The ISME Journal.

Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology.

Natalia N. Ivanova, N. Kyrpides, R. Seshadri, 2016, Environmental microbiology.

Stop Codon Reassignment in the Wild

Natalia N. Ivanova, A. Visel, N. Kyrpides, 2014 .

Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11.

R. Breaker, S. Giovannoni, M. Meyer, 2009, Environmental microbiology.

Proteorhodopsin in the ubiquitous marine bacterium SAR11

S. Giovannoni, L. Wilhelm, E. Mathur, 2005, Nature.

Globally Distributed Uncultivated Oceanic N2-Fixing Cyanobacteria Lack Oxygenic Photosystem II

Jonathan P. Zehr, J. Affourtit, Faheem Niazi, 2008, Science.

Stop codon reassignments in the wild

Axel Visel, Marcel Huntemann, Edward M. Rubin, 2014, Science.

Microbial community gene expression within colonies of the diazotroph, Trichodesmium, from the Southwest Pacific Ocean

A. White, I. Hewson, J. Montoya, 2009, The ISME Journal.

Identifying the specific signals that mediate correlation-dependent structural plasticity will be greatly facilitated by exploiting the experi- mental protocol presented here

Natalia N. Ivanova, A. Visel, N. Kyrpides, 2014 .

The small genome of an abundant coastal ocean methylotroph.

S. Giovannoni, U. Stingl, S. Givan, 2008, Environmental microbiology.

Two Strains of Crocosphaera watsonii with Highly Conserved Genomes are Distinguished by Strain-Specific Features

S. Bench, J. Zehr, H. J. Tripp, 2011, Front. Microbio..

Facile Recoding of Selenocysteine in Nature.

Natalia N. Ivanova, N. Kyrpides, E. Rubin, 2016, Angewandte Chemie.

The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016, Standards in genomic sciences.

Spatial patterns and light-driven variation of microbial population gene expression in surface waters of the oligotrophic open ocean.

I. Hewson, J. Montoya, J. Zehr, 2010, Environmental microbiology.

The unique metabolism of SAR11 aquatic bacteria

H. J. Tripp, 2013, Journal of Microbiology.

Toward a standard in structural genome annotation for prokaryotes

Natalia N. Ivanova, Samuel H. Payne, G. Sutton, 2015, Standards in genomic sciences.

Transfer RNAs with novel cloverleaf structures

Natalia N. Ivanova, N. Kyrpides, E. Rubin, 2016, Nucleic acids research.

Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site

S. Giovannoni, U. Stingl, H. J. Tripp, 2007, The ISME Journal.

ARBitrator: a software pipeline for on-demand retrieval of auto-curated nifH sequences from GenBank

Jonathan P. Zehr, Philip Heller, H. James Tripp, 2014, Bioinform..

In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii

R. Beinart, A. White, I. Hewson, 2009, The ISME Journal.

Metagenomic potential of microbial assemblages in the surface waters of the central Pacific Ocean tracks variability in oceanic habitat

I. Hewson, D. Karl, J. Zehr, 2009 .

Metabolic streamlining in an open-ocean nitrogen-fixing cyanobacterium

Jonathan P. Zehr, J. Affourtit, Faheem Niazi, 2010, Nature.

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity.

Daniel Patrick Smith, S. Giovannoni, L. Steindler, 2010, Environmental microbiology.

Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data

Scott A Givan, Daniel Patrick Smith, S. Giovannoni, 2007, Biology Direct.

Misannotations of rRNA can now generate 90% false positive protein matches in metatranscriptomic studies

Joshua M. Stuart, Jonathan P. Zehr, I. Hewson, 2011, Nucleic acids research.

Unicellular cyanobacteria with a new mode of life: the lack of photosynthetic oxygen evolution allows nitrogen fixation to proceed

J. Zehr, H. J. Tripp, H. Bothe, 2010, Archives of Microbiology.

High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11).

S. Giovannoni, L. Wilhelm, M. Rappé, 2007, Environmental microbiology.

Genome Streamlining in a

M. Noordewier, S. Giovannoni, S. Givan, 2005 .