B. P. Belotserkovskii

发表

When transcription goes on Holliday: Double Holliday junctions block RNA polymerase II transcription in vitro.

P. Hanawalt, Anne Pipathsouk, B. P. Belotserkovskii, 2017, Biochimica et biophysica acta. Gene regulatory mechanisms.

A Triplex-forming Sequence from the Human c-MYC Promoter Interferes with DNA Transcription*

P. Hanawalt, S. Tornaletti, Erandi K. De Silva, 2007, Journal of Biological Chemistry.

24 Interference of PNA binding to the non-template strand with transcription supports the general model for transcription blockage by R-loop formation

P. Hanawalt, B. P. Belotserkovskii, 2015, Journal of biomolecular structure & dynamics.

130 Transcription blockage by single-strand breaks in various sequences and the general model for transcription blockage by R-loop formation

Syed Shayon Saleh, P. Hanawalt, S. Mirkin, 2013 .

Kinetic trapping of H-DNA by oligonucleotide binding.

M. Frank-Kamenetskii, B. P. Belotserkovskii, M. Krasilnikova, 1992, Nucleic acids research.

Denaturation and association of DNA sequences by certain polypropylene surfaces.

B. P. Belotserkovskii, B. Johnston, 1997, Analytical biochemistry.

Polypropylene Tube Surfaces May Induce Denaturation and Multimerization of DNA

B. P. Belotserkovskii, B. Johnston, C. Gaillard, 1996, Science.

R-loop generation during transcription: Formation, processing and cellular outcomes.

Alicia D. D’Souza, P. Hanawalt, S. Tornaletti, 2018, DNA repair.

DNA sequences that interfere with transcription: implications for genome function and stability.

P. Hanawalt, S. Mirkin, B. P. Belotserkovskii, 2013, Chemical reviews.

Transcription blockage by homopurine DNA sequences: role of sequence composition and single-strand breaks

Syed Shayon Saleh, P. Hanawalt, S. Mirkin, 2012, Nucleic acids research.

DNA unwinding upon strand-displacement binding of a thymine-substituted polyamide to double-stranded DNA.

M. Egholm, P. Nielsen, M. Frank-Kamenetskii, 1993, Proceedings of the National Academy of Sciences of the United States of America.

Capture in the gel: Intermoleculare triplex formation during gel electrophoresis

B. P. Belotserkovskii, Brian H. Johnston, 1996, Electrophoresis.

Alternate-strand triplex formation: modulation of binding to matched and mismatched duplexes by sequence choice in the Pu-Pu-Py block.

B. P. Belotserkovskii, B. Johnston, S. V. Balatskaya, 1996, Biochemistry.

Formation of intramolecular triplex in homopurine-homopyrimidine mirror repeats with point substitutions.

S. Mirkin, M. Frank-Kamenetskii, B. P. Belotserkovskii, 1990, Nucleic acids research.

A random-walk model for retardation of interacting species during gel electrophoresis: implications for gel-shift assays.

B. P. Belotserkovskii, B. Johnston, 1997, Biophysical journal.

Study of pH‐dependent structural transition in telomeric sequences by two‐dimensional gel electrophoresis

M. Frank-Kamenetskii, B. P. Belotserkovskii, 1993, Electrophoresis.

Chemical probing of homopurine-homopyrimidine mirror repeats in supercoiled DNA

S. Mirkin, M. Frank-Kamenetskii, B. P. Belotserkovskii, 1988, Nature.

Torque-Induced Rotational Dynamics in Polymers: Torsional Blobs and Thinning

M. Baiesi, B. P. Belotserkovskii, E. Carlon, 2016, 1602.00551.

Strong transcription blockage mediated by R-loop formation within a G-rich homopurine–homopyrimidine sequence localized in the vicinity of the promoter

P. Hanawalt, B. P. Belotserkovskii, Jane Hae Soo Shin, 2017, Nucleic acids research.

Mechanisms and implications of transcription blockage by guanine-rich DNA sequences

P. Hanawalt, S. Mirkin, S. Tornaletti, 2010, Proceedings of the National Academy of Sciences.

Mechanism for R-loop formation remote from the transcription start site: Topological issues and possible facilitation by dissociation of RNA polymerase.

P. Hanawalt, B. P. Belotserkovskii, 2022, DNA repair.

Anchoring nascent RNA to the DNA template could interfere with transcription.

P. Hanawalt, B. P. Belotserkovskii, 2011, Biophysical journal.

Transcription Inhibition by PNA-Induced R-Loops.

P. Hanawalt, Sum-Yan Ng, B. P. Belotserkovskii, 2020, Methods in molecular biology.

A novel mode for transcription inhibition mediated by PNA-induced R-loops with a model in vitro system.

Alicia D. D’Souza, P. Hanawalt, B. P. Belotserkovskii, 2018, Biochimica et biophysica acta. Gene regulatory mechanisms.

Transcription blockage by stable H-DNA analogs in vitro

P. Hanawalt, S. Mirkin, Shristi Pandey, 2015, Nucleic acids research.

Transcription blockage by bulky end termini at single-strand breaks in the DNA template: differential effects of 5' and 3' adducts.

P. Hanawalt, B. P. Belotserkovskii, Alexander J. Neil, 2012, Biochemistry.

DNA slip-outs cause RNA polymerase II arrest in vitro: potential implications for genetic instability

P. Hanawalt, B. P. Belotserkovskii, Viviana Salinas-Rios, 2011, Nucleic acids research.

Inhibitory effect of a short Z-DNA forming sequence on transcription elongation by T7 RNA polymerase

P. Hanawalt, S. Tornaletti, Guliang Wang, 2008, Nucleic acids research.

An eclectic DNA structure adopted by human telomeric sequence under superhelical stress and low pH.

M. Frank-Kamenetskii, B. P. Belotserkovskii, O. Danilevskaya, 1992, Journal of biomolecular structure & dynamics.

Theoretical Analysis of DNA Branch Migration in the Presence of a Slow Reversible Initiation Step

B. P. Belotserkovskii, D. Zarling, 2000, Journal of biomolecular structure & dynamics.

Peptide nucleic acid (PNA) binding and its effect on in vitro transcription in friedreich's ataxia triplet repeats

P. Hanawalt, B. P. Belotserkovskii, Richard Liu, 2009, Molecular carcinogenesis.

Relationships between the winding angle, the characteristic radius, and the torque for a long polymer chain wound around a cylinder: implications for RNA winding around DNA during transcription.

B. P. Belotserkovskii, 2014, Physical review. E, Statistical, nonlinear, and soft matter physics.

Topoisomerase Action on Short DNA Duplexes Reveals Requirements for Gate and Transfer DNA Segments*

N. Cozzarelli, P. Arimondo, B. P. Belotserkovskii, 2006, Journal of Biological Chemistry.

The Saccharomyces cerevisiae Smc2/4 Condensin Compacts DNA into (+) Chiral Structures without Net Supercoiling*

N. Cozzarelli, N. J. Crisona, J. Lindsley, 2005, Journal of Biological Chemistry.

Peptide nucleic acid (PNA) facilitates multistranded hybrid formation between linear double-stranded DNA targets and RecA protein-coated complementary single-stranded DNA probes.

B. P. Belotserkovskii, D. Zarling, 2002, Biochemistry.

Kinetics and mechanism of polyamide ("peptide") nucleic acid binding to duplex DNA.

V V Demidov, P. Nielsen, M. Frank-Kamenetskii, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Analysis of a one-dimensional random walk with irreversible losses at each step: applications for protein movement on DNA.

B. P. Belotserkovskii, D. Zarling, 2004, Journal of theoretical biology.

Duration Time of a One-dimensional Random Walk as a Function of the Energies of the Intermediate States: Application for Dissociation and Relaxation Processes in DNA Hybrids

B. P. Belotserkovskii, D. Zarling, 2001, Journal of biomolecular structure & dynamics.