D. Wagner

J. Foster, A. Vogler, P. Keim, 2016, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Yersinia pestis and the three plague pandemics--authors' reply.

E. Holmes, P. Keim, D. Wagner, 2014, The Lancet. Infectious diseases.

Yersinia pestis and the three plague pandemics

D. Wagner, 2014 .

ISCR Elements Are Key Players in IncA/C Plasmid Evolution

M. J. Rosovitz, W. F. Fricke, P. McDermott, 2010 .

Triatoma infestans Bugs in Southern Patagonia, Argentina

S. Chanteau, B. Rasoamanana, A. Carattoli, 2010 .

Dominance of multidrug resistant CC271 clones in macrolide-resistant streptococcus pneumoniae in Arizona

P. Brzoska, D. Engelthaler, M. Furtado, 2012, BMC Microbiology.

Genomic characterization of Francisella tularensis and other diverse Francisella species from complex samples

Dawn N. Birdsell, P. Keim, M. Forsman, 2022, bioRxiv.

Conservation of Resistance-Nodulation-Cell Division Efflux Pump-Mediated Antibiotic Resistance in Burkholderia cepacia Complex and Burkholderia pseudomallei Complex Species

P. Keim, H. Schweizer, J. Sahl, 2021, Antimicrobial agents and chemotherapy.

Francisella tularensis subsp. novicida isolated from a human in Arizona

Raymond K. Auerbach, Amy J. Vogler, Dawn N. Birdsell, 2009, BMC Research Notes.

Reorganized Genomic Taxonomy of Francisellaceae Enables Design of Robust Environmental PCR Assays for Detection of Francisella tularensis

Dawn N. Birdsell, David Sundell, A. Vallesi, 2021, Microorganisms.

TaqMan Real-Time PCR Assays for Single-Nucleotide Polymorphisms Which Identify Francisella tularensis and Its Subspecies and Subpopulations

Amy J. Vogler, Dawn N. Birdsell, A. Vogler, 2014, PloS one.

A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network

P. Keim, C. Roe, J. Gillece, 2019, bioRxiv.

An optimized, multiplexed multi‐locus variable‐number tandem repeat analysis system for genotyping Francisella tularensis

A. Vogler, P. Keim, D. Wagner, 2009, Letters in applied microbiology.

Genomic Deletion Marking an Emerging Subclone of Francisella tularensis subsp. holarctica in France and the Iberian Peninsula

S. Francesconi, A. Benson, P. Fey, 2007, Applied and Environmental Microbiology.

Molecular genotyping of Acinetobacter spp. isolated in Arizona, USA, using multilocus PCR and mass spectrometry.

D. Ecker, R. Sampath, V. Waddell, 2013, Journal of medical microbiology.

Diverse Burkholderia Species Isolated from Soils in the Southern United States with No Evidence of B. pseudomallei

R. Colman, P. Keim, J. Schupp, 2015, PloS one.

Spatial analysis and identification of high risk plague regions in Pakistan based on associated rodent species distribution.

P. Keim, S. Javed, S. Eqani, 2016, Journal of infection in developing countries.

Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa

C. Hepp, D. Wagner, J. Busch, 2018, Parasites & Vectors.

Low risk of acquiring melioidosis from the environment in the continental United States

A. Peterson, A. Hoffmaster, J. Sahl, 2022, PloS one.

Towards a rapid molecular diagnostic for melioidosis: Comparison of DNA extraction methods from clinical specimens.

D. Engelthaler, P. Keim, B. Currie, 2012, Journal of microbiological methods.

The Genetic and Molecular Basis of O-Antigenic Diversity in Burkholderia pseudomallei Lipopolysaccharide

P. Keim, S. Peacock, C. Allender, 2012, PLoS neglected tropical diseases.

A Horizontal Gene Transfer Event Deﬁnes Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions (cid:1) †

Raymond K. Auerbach, A. C. Munk, T. Brettin, 2007 .

Specimenspseudomallei in Clinical Detection of the Melioidosis Agent Comparison of TaqMan PCR Assays for

D. Engelthaler, R. Colman, P. Keim, 2014 .

The In Silico Genotyper (ISG): an open-source pipeline to rapidly identify and annotate nucleotide variants for comparative genomics applications

Raymond K. Auerbach, Crystal M. Hepp, S. Beckstrom-Sternberg, 2015, bioRxiv.

Phylogenetic diversity and historical patterns of pandemic spread of Yersinia pestis

Giovanna Morelli, Thibaut Jombart, Paul Keim, 2010, Nature Genetics.

Local-Scale Genotype Diversity of Yersinia Pestis: A Case Study from Ambohitromby, Ankazobe District (2003-2016), Madagascar

A. Vogler, J. Sahl, B. Ramasindrazana, 2020 .

No evidence for enzootic plague within black‐tailed prairie dog (Cynomys ludovicianus) populations

R. Colman, P. Keim, J. Sahl, 2021, Integrative zoology.

Multiple mutations in the para-sodium channel gene are associated with pyrethroid resistance in Rhipicephalus microplus from the United States and Mexico

J. Mosqueda, P. Olafson, D. Wagner, 2014, Parasites & Vectors.

Widespread movement of invasive cattle fever ticks (Rhipicephalus microplus) in southern Texas leads to shared local infestations on cattle and deer

P. Olafson, D. Wagner, J. Busch, 2014, Parasites & Vectors.

Thirty years of tick population genetics: a comprehensive review.

D. Wagner, J. Busch, G. Scoles, 2015, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Invasive potential of cattle fever ticks in the southern United States

A. Peterson, P. Olafson, D. Wagner, 2014, Parasites & Vectors.

Phenotypic and functional characterization of Bacillus anthracis biofilms.

Raymond K. Auerbach, J. Ravel, P. Keim, 2007, Microbiology.

Identifying Sources of Human Exposure to Plague

Amy J. Vogler, K. Gage, A. Vogler, 2005, Journal of Clinical Microbiology.

Hybridization in natural sympatric populations of Dermacentor ticks in northwestern North America

D. Wagner, J. Busch, J. Giles, 2013, Ecology and evolution.

A review of methods for subtyping Yersinia pestis: From phenotypes to whole genome sequencing.

A. Vogler, P. Keim, D. Wagner, 2016, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales.

Paul Keim, Talima Pearson, Lynn Y. Huynh, 2004, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping

Lynn Y. Huynh, R. Robison, D. DeShazer, 2007, BMC Microbiology.

Coinfections identified from metagenomic analysis of cervical lymph nodes from tularemia patients

Dawn N. Birdsell, R. Colman, P. Keim, 2018, BMC Infectious Diseases.

Characterization of Ceftazidime Resistance Mechanisms in Clinical Isolates of Burkholderia pseudomallei from Australia

D. Engelthaler, P. Keim, S. Peacock, 2012, PloS one.

Within-Host Evolution of Burkholderia pseudomallei in Four Cases of Acute Melioidosis

Amy J. Vogler, J. Foster, A. Vogler, 2010, PLoS pathogens.

VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia.

Amy J. Vogler, A. Vogler, P. Keim, 2007, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Stenoparib, an Inhibitor of Cellular Poly(ADP-Ribose) Polymerase, Blocks Replication of the SARS-CoV-2 and HCoV-NL63 Human Coronaviruses In Vitro

S. Knudsen, P. Keim, J. Sahl, 2021, mBio.

Stenoparib, an inhibitor of cellular poly (ADP-ribose) polymerase (PARP), blocks replication of the SARS-CoV-2 human coronavirus in vitro

S. Knudsen, P. Keim, J. Sahl, 2020, bioRxiv.

Systematic Review and Consensus Guidelines for Environmental Sampling of Burkholderia pseudomallei

H. Wertheim, N. Day, S. Peacock, 2013, PLoS neglected tropical diseases.

Burkholderia ubonensis High-Level Tetracycline Resistance Is Due to Efflux Pump Synergy Involving a Novel TetA(64) Resistance Determinant

P. Keim, H. Schweizer, J. Sahl, 2020, Antimicrobial Agents and Chemotherapy.

Accurate and Rapid Identification of the Burkholderia pseudomallei Near-Neighbour, Burkholderia ubonensis, Using Real-Time PCR

J. Foster, P. Keim, T. Pearson, 2013, PloS one.

Burkholderia humptydooensis sp. nov., a New Species Related to Burkholderia thailandensis and the Fifth Member of the Burkholderia pseudomallei Complex

G. Palacios, P. Keim, J. Ladner, 2016, Applied and Environmental Microbiology.

NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats.

Maliha Aziz, Paul Keim, Jason W Sahl, 2016, Microbial genomics.

Epidemiological Tracking and Population Assignment of the Non-Clonal Bacterium, Burkholderia pseudomallei

J. Foster, B. Spratt, D. Godoy, 2011, PLoS neglected tropical diseases.

Evidence for two subspecies of Gunnison’s prairie dogs (Cynomys gunnisoni), and the general importance of the subspecies concept

Andrew P. Martin, R. Guralnick, D. Wagner, 2014 .

Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

Paul Keim, Talima Pearson, Amy J. Vogler, 2011, BMC Microbiology.

Burkholderia stagnalis sp. nov. and Burkholderia territorii sp. nov., two novel Burkholderia cepacia complex species from environmental and human sources.

P. Vandamme, P. Keim, J. Lipuma, 2015, International journal of systematic and evolutionary microbiology.

Divergent lineages of pathogenic Leptospira species are widespread and persisting in the environment in Puerto Rico, USA

J. Sahl, J. Nally, D. Wagner, 2021, medRxiv.

Phylogeography of Francisella tularensis: Global Expansion of a Highly Fit Clone

Raymond K. Auerbach, Paul Keim, Talima Pearson, 2009, Journal of bacteriology.

Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague

Amy J. Vogler, Dawn N. Birdsell, L. Rahalison, 2017, PLoS neglected tropical diseases.

Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus

E. Holmes, G. B. Golding, J. Krause, 2016, bioRxiv.

Phylogenetic diversity and historical patterns of pandemic spread of Yersinia pestis

Ruifu Yang, F. Balloux, J. Ravel, 2010, Nature genetics.

A North American Yersinia pestis Draft Genome Sequence: SNPs and Phylogenetic Analysis

Raymond K. Auerbach, J. Touchman, S. Beckstrom-Sternberg, 2007, PloS one.

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

Bruce Budowle, Paul Keim, Manohar R Furtado, 2010, Investigative Genetics.

Whole-genome typing of Bacillus anthracis isolates by next-generation sequencing accurately and rapidly identifies strain-specific diagnostic polymorphisms

P. Brzoska, C. Cummings, R. Fang, 2009 .

Bovine Leptospirosis Due to Persistent Renal Carriage of Leptospira borgpetersenii Serovar Tarassovi

E. Putz, J. Sahl, J. Nally, 2022, Frontiers in Veterinary Science.

Genetic variation at the MHC DRB1 locus is similar across Gunnison's prairie dog (Cynomys gunnisoni) colonies regardless of plague history

R. Colman, M. Shuey, J. Schupp, 2016, Ecology and evolution.

Persistence of Gunnison’s prairie dog colonies in Arizona, USA

L. C. Drickamer, P. Keim, C. Allender, 2006 .

A Case of Burkholderia pseudomallei Mycotic Aneurysm Linked to Exposure in the Caribbean via Whole-Genome Sequencing

A. Meltzer, J. Sahl, D. Wagner, 2022, Open forum infectious diseases.

Human plague: An old scourge that needs new answers

N. Stenseth, P. Horby, Y. Yazdanpanah, 2020, PLoS neglected tropical diseases.

Long-Term Survival of Virulent Tularemia Pathogens outside a Host in Conditions That Mimic Natural Aquatic Environments

I. Golovliov, M. Forsman, J. Sahl, 2021, Applied and Environmental Microbiology.

Molecular Epidemiology, Evolution, and Ecology of Francisella

P. Keim, D. Wagner, A. Johansson, 2007, Annals of the New York Academy of Sciences.

Francisella tularensis in the United States

P. Keim, K. Kubota, J. Petersen, 2005, Emerging infectious diseases.

An outbreak of respiratory tularemia caused by diverse clones of Francisella tularensis.

P. Keim, M. Forsman, A. Lärkeryd, 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Francisella tularensis subsp. tularensis Group A.I, United States

Amy J. Vogler, Dawn N. Birdsell, A. Vogler, 2014, Emerging infectious diseases.

Complete Genomic Characterization of a Pathogenic A.II Strain of Francisella tularensis Subspecies tularensis

Raymond K. Auerbach, R. Scheuermann, J. Pearson, 2007, PloS one.

Water as Source of Francisella tularensis Infection in Humans, Turkey

P. Keim, J. Sahl, D. Wagner, 2015, Emerging infectious diseases.

Tularemia in Alaska, 1938 - 2010

A. Vogler, P. Keim, K. Hueffer, 2011, Acta veterinaria Scandinavica.

Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico

A. Hoffmaster, P. Keim, C. Roe, 2019, PLoS neglected tropical diseases.

Unprecedented Melioidosis Cases in Northern Australia Caused by an Asian Burkholderia pseudomallei Strain Identified by Using Large-Scale Comparative Genomics

P. Keim, J. Sahl, B. Currie, 2015, Applied and Environmental Microbiology.

Multiple phylogenetically-diverse, differentially-virulent Burkholderia pseudomallei isolated from a single soil sample collected in Thailand

P. Keim, S. Peacock, C. Roe, 2022, PLoS neglected tropical diseases.

Long-range dispersal moved Francisella tularensis into Western Europe from the East

Dawn N. Birdsell, P. Keim, M. Forsman, 2016, Microbial genomics.

Diverse Francisella tularensis Strains and Oropharyngeal Tularemia, Turkey

A. Vogler, P. Keim, M. Forsman, 2015, Emerging infectious diseases.

Phylogeography of Francisella tularensis subsp. holarctica, Europe

Paul Keim, Amy J. Vogler, Dawn N. Birdsell, 2012, Emerging infectious diseases.

Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins.

Emily K. Cope, J. Caporaso, P. Keim, 2019, Anaerobe.

Genomic islands from five strains of Burkholderia pseudomallei

Raymond K. Auerbach, W. Nierman, S. Beckstrom-Sternberg, 2008, BMC Genomics.

Phylogeography of Francisella tularensis ssp. holarctica in France

Amy J. Vogler, Dawn N. Birdsell, J. Vaissaire, 2011, Letters in applied microbiology.

Trends of Human Plague, Madagascar, 1998–2016

S. Chanteau, L. Rahalison, F. Rakotomanana, 2019, Emerging infectious diseases.

Identification of novel, cryptic Clostridioides species isolates from environmental samples collected from diverse geographical locations

P. Keim, C. Roe, J. Sahl, 2022, Microbial genomics.

Genetic characterization of Theileria equi infecting horses in North America: evidence for a limited source of U.S. introductions

D. Wagner, J. Busch, L. Kappmeyer, 2013, Parasites & Vectors.

Pangenome Analysis of Burkholderia pseudomallei: Genome Evolution Preserves Gene Order despite High Recombination Rates

P. Keim, H. Gibbons, C. Allender, 2015, PloS one.

Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer

Raymond K. Auerbach, R. Kaul, J. Foster, 2009, BMC Biology.

Identification of Burkholderia pseudomallei Near-Neighbor Species in the Northern Territory of Australia

P. Keim, B. Currie, M. Kaestli, 2015, PLoS neglected tropical diseases.

Comparison of TaqMan PCR Assays for Detection of the Melioidosis Agent Burkholderia pseudomallei in Clinical Specimens

Talima Pearson, Erin P. Price, Erin Kelley, 2012, Journal of Clinical Microbiology.

Molecular Epidemiologic Investigation of an Anthrax Outbreak among Heroin Users, Europe

N. Bergman, A. Phillippy, J. Foster, 2012, Emerging infectious diseases.

Mass spectrometry provides accurate characterization of two genetic marker types in Bacillus anthracis.

Paul Keim, Lynn Y. Huynh, Yun Jiang, 2004, BioTechniques.

Burkholderia thailandensis Isolated from the Environment, United States

A. Hoffmaster, P. Keim, J. Sahl, 2023, Emerging infectious diseases.

More than 50% of Clostridium difficile Isolates from Pet Dogs in Flagstaff, USA, Carry Toxigenic Genotypes

P. Keim, Nathan D Hicks, J. Schupp, 2016, PloS one.

A Bacillus anthracis Genome Sequence from the Sverdlovsk 1979 Autopsy Specimens

V. Fofanov, A. Hoffmaster, P. Keim, 2016, mBio.

Redefining the differences in gene content between Yersinia pestis and Yersinia pseudotuberculosis using large-scale comparative genomics

P. Keim, J. Sahl, D. Wagner, 2015, Microbial genomics.

Forensic analysis in bacterial pathogens

Amy J. Vogler, J. Foster, A. Vogler, 2020, Microbial Forensics.

Multiple Locus Variable Number Tandem Repeat (VNTR) Analysis (MLVA) of Brucella spp. Identifies Species-Specific Markers and Insights into Phylogenetic Relationships

Lynn Y. Huynh, T. Popović, T. Hadfield, 2008 .

Population Differences in Host Immune Factors May Influence Survival of Gunnison’s Prairie Dogs (Cynomys gunnisoni) during Plague Outbreaks

R. Colman, P. Keim, D. Wagner, 2011, Journal of wildlife diseases.

Free mutual mate preferences in house mice affect reproductive success and offspring performance

L. C. Drickamer, P. Gowaty, D. Wagner, 2003, Animal Behaviour.

Differential plague-transmission dynamics determine Yersinia pestis population genetic structure on local, regional, and global scales.

Paul Keim, L. C. Drickamer, A. Vogler, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis

P. Keim, J. Schupp, J. Gillece, 2017, PLoS neglected tropical diseases.

Mutations, mutation rates, and evolution at the hypervariable VNTR loci of Yersinia pestis.

Paul Keim, Talima Pearson, Christopher Allender, 2007, Mutation research.

Evaluating the long‐term persistence of Bacillus spores on common surfaces

P. Gurian, P. Keim, D. Wagner, 2018, Microbial biotechnology.

Development and Validation of Burkholderia pseudomallei-Specific Real-Time PCR Assays for Clinical, Environmental or Forensic Detection Applications

Direk Limmathurotsakul, Paul Keim, Talima Pearson, 2012, PloS one.

Use of Single Nucleotide Polymorphisms in the plcR Gene for Specific Identification of Bacillus anthracis

W. Ryan Easterday, Paul Keim, Tatum S. Simonson, 2005, Journal of Clinical Microbiology.

BurkDiff: A Real-Time PCR Allelic Discrimination Assay for Burkholderia Pseudomallei and B. mallei

D. Engelthaler, P. Keim, S. Peacock, 2010, PloS one.

A single introduction of Yersinia pestis to Brazil during the 3rd plague pandemic

Amy J. Vogler, Dawn N. Birdsell, A. Vogler, 2019, PloS one.

Pre-Columbian Origins for North American Anthrax

J. Foster, J. Ravel, A. Hoffmaster, 2009, PloS one.

Genotyping of Burkholderia mallei from an Outbreak of Glanders in Bahrain Suggests Multiple Introduction Events

Crystal M. Hepp, P. Keim, C. Hepp, 2014, PLoS neglected tropical diseases.

Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar

Paul Keim, Jacques Ravel, Mark Achtman, 2011, PLoS neglected tropical diseases.

Yersinia pestis Evolution on a Small Timescale: Comparison of Whole Genome Sequences from North America

Raymond K. Auerbach, J. Ravel, T. Brettin, 2007, PloS one.

Exploring Cefiderocol Resistance Mechanisms in Burkholderia pseudomallei

P. Keim, H. Schweizer, J. Sahl, 2023, Antimicrobial agents and chemotherapy.

A conserved active site PenA β-lactamase Ambler motif specific for Burkholderia pseudomallei/B. mallei is likely responsible for intrinsic amoxicillin-clavulanic acid sensitivity and facilitates a simple diagnostic PCR assay for melioidosis.

P. Keim, H. Schweizer, J. Sahl, 2023, International journal of antimicrobial agents.

Diverse Genotypes of Yersinia pestis Caused Plague in Madagascar in 2007

Amy J. Vogler, A. Vogler, P. Keim, 2015, PLoS neglected tropical diseases.

Climate‐driven reduction of genetic variation in plant phenology alters soil communities and nutrient pools

C. Schadt, Zamin-K. Yang, D. Wagner, 2019, Global change biology.

THE INNATE IMMUNE RESPONSE MAY BE IMPORTANT FOR SURVIVING PLAGUE IN WILD GUNNISON'S PRAIRIE DOGS

J. Foster, S. Beckstrom-Sternberg, P. Keim, 2013, Journal of wildlife diseases.

Proteomic Signatures of Antimicrobial Resistance in Yersinia pestis and Francisella tularensis

Sarah C. Jenson, Dawn N. Birdsell, H. Schweizer, 2022, Frontiers in Medicine.

Molecular Investigations of a Locally Acquired Case of Melioidosis in Southern AZ, USA

L. Price, V. Waddell, S. Beckstrom-Sternberg, 2011, PLoS neglected tropical diseases.

Detection of SARS-CoV-2 and its S and N proteins using surface enhanced Raman spectroscopy

P. Keim, A. Koppisch, Sierra A. Jaramillo, 2021, RSC advances.

Nasopharyngeal Bacterial Interactions in Children

P. Keim, D. Wagner, M. Hanczaruk, 2022 .

Title Nasopharyngeal Bacterial Interactions in Children

P. Keim, L. Myint, U. Reischl, 2017 .

Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years

Crystal M. Hepp, Dawn N. Birdsell, Markus H. Antwerpen, 2015, EBioMedicine.

Phylogeography of Bacillus anthracis in the Country of Georgia Shows Evidence of Population Structuring and Is Dissimilar to Other Regional Genotypes

P. Gajer, W. Getz, J. Ravel, 2014, PloS one.

Injectional Anthrax in Heroin Users, Europe, 2000–2012

Markus H. Antwerpen, P. Keim, U. Reischl, 2014, Emerging infectious diseases.

Draft Genome Sequences of Two Bulgarian Bacillus anthracis Strains

J. Foster, P. Keim, J. Sahl, 2013, Genome Announcements.

High resolution genotyping of Bacillus anthracis outbreak strains using four highly mutable single nucleotide repeat markers

P. Keim, L. Kenefic, D. Wagner, 2008, Letters in applied microbiology.

Correction: Pre-Columbian Origins for North American Anthrax

P. Gajer, J. Foster, J. Ravel, 2009, PLoS ONE.

Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa

C. Hepp, D. Wagner, J. Busch, 2018, Parasites & vectors.

High-throughput extraction of arthropod vector and pathogen DNA using bead milling.

P. Keim, C. Allender, W. Easterday, 2004, BioTechniques.

Expanding the Burkholderia pseudomallei Complex with the Addition of Two Novel Species: Burkholderia mayonis sp. nov. and Burkholderia savannae sp. nov.

P. Keim, H. Schweizer, J. Schupp, 2021, Applied and environmental microbiology.

Improved multilocus sequence typing of Burkholderia pseudomallei and closely related species.

B. Spratt, B. Currie, D. Wagner, 2016, Journal of medical microbiology.

Microhabitat Selection by Golden Mice (Ochrotomys nuttalli) at Arboreal Nest Sites

J. Newman, G. A. Feldhamer, D. Wagner, 2000 .

ABIOTIC HABITAT CORRELATES OF GUNNISON'S PRAIRIE DOG IN ARIZONA

L. C. Drickamer, D. Wagner, DAVID M. WAGNER, 2004 .

Selective isolation of Yersinia pestis from plague-infected fleas.

R. Colman, P. Keim, J. Schupp, 2010, Journal of microbiological methods.

A Decade of Plague in Mahajanga, Madagascar: Insights into the Global Maritime Spread of Pandemic Plague

Amy J. Vogler, S. Beckstrom-Sternberg, S. Chanteau, 2013, mBio.

Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach

J. Foster, P. Keim, E. Merkley, 2015, PloS one.

Microbial forensic investigations in the context of bacterial population genetics

Mark R. Wilson, P. Keim, B. Budowle, 2011, Microbial Forensics.

Fine-scale Identification of the Most Likely Source of a Human Plague Infection

Amy J. Vogler, K. Gage, P. Reynolds, 2009, Emerging infectious diseases.

Complete Genome Sequence of the Environmental Burkholderia pseudomallei Sequence Type 131 Isolate MSHR1435, Associated with a Chronic Melioidosis Infection

P. Keim, T. Pearson, J. Sahl, 2018, Genome Announcements.

Leptospira sanjuanensis sp. nov., a pathogenic species of the genus Leptospira isolated from soil in Puerto Rico.

C. Roe, J. Sahl, J. Nally, 2022, International journal of systematic and evolutionary microbiology.

A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions

Raymond K. Auerbach, A. C. Munk, T. Brettin, 2007, Journal of bacteriology.

DNA Capture and Enrichment: A Culture-Independent Approach for Characterizing the Genomic Diversity of Pathogenic Leptospira Species

J. Sahl, J. Nally, D. Wagner, 2023, Microorganisms.

Developing Inclusivity and Exclusivity Panels for Testing Diagnostic and Detection Tools Targeting Burkholderia pseudomallei, the Causative Agent of Melioidosis.

P. Keim, J. Sahl, D. Wagner, 2018, Journal of AOAC International.

Viability of Yersinia pestis subcultures in agar stabs

José Luiz de Oliveira Magalhães, Amy J. Vogler, A. Vogler, 2016, Letters in applied microbiology.

Transmission of Antimicrobial Resistant Yersinia pestis During a Pneumonic Plague Outbreak

C. Rogier, S. Cauchemez, A. Vogler, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Resistance to plague among black-tailed prairie dog populations.

M. Antolin, D. Wagner, Kacy R. Cobble, 2012, Vector borne and zoonotic diseases.

A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network

P. Keim, C. Roe, J. Gillece, 2019, bioRxiv.

Burkholderia pseudomallei in Soil, US Virgin Islands, 2019

A. Hoffmaster, I. Guendel, J. Sahl, 2020, Emerging Infectious Diseases.

Identification of Burkholderia pseudomallei Near-Neighbor Species in the Northern Territory of Australia.

P. Keim, B. Currie, M. Kaestli, 2015 .

A local-scale One Health genomic surveillance of Clostridioides difficile demonstrates highly related strains from humans, canines, and the environment

P. Keim, C. Roe, J. Sahl, 2023, Microbial genomics.

Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor

A. Hoffmaster, G. Palacios, P. Keim, 2016, Genome Announcements.