A. Nougairède

发表

Chikungunya fever: Epidemiology, clinical syndrome, pathogenesis and therapy

E. Gould, X. de Lamballerie, P. Roques, 2013, Antiviral Research.

In vitro antiviral activity of arbidol against Chikungunya virus and characteristics of a selected resistant mutant.

X. de Lamballerie, A. Nougairède, I. Delogu, 2011, Antiviral research.

Models cannot predict future outbreaks: A/H1N1 virus, the paradigm

R. Charrel, D. Raoult, A. Nougairède, 2011, European Journal of Epidemiology.

Increased incidence of acute parvovirus B19 infections in Marseille, France, in 2012 compared with the 2002-2011 period.

X. de Lamballerie, R. Charrel, H. Richet, 2014, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Vector-free transmission and persistence of Japanese encephalitis virus in pigs

Horst Posthaus, R. Charrel, A. Nougairède, 2016, Nature Communications.

Comparative detection of enterovirus RNA in cerebrospinal fluid: GeneXpert system vs. real-time RT-PCR assay.

X. de Lamballerie, R. Charrel, M. Drancourt, 2011, Clinical Microbiology and Infection.

A One-Health Approach to Investigating an Outbreak of Alimentary Tick-Borne Encephalitis in a Non-endemic Area in France (Ain, Eastern France): A Longitudinal Serological Study in Livestock, Detection in Ticks, and the First Tick-Borne Encephalitis Virus Isolation and Molecular Characterisation

G. Grard, N. Dheilly, G. Durand, 2022, Frontiers in Microbiology.

Development and characterization of recombinant tick-borne encephalitis virus expressing mCherry reporter protein: a new tool for high-throughput screening of antiviral compounds, and neutralizing antibody assays.

E. Gould, X. de Lamballerie, J. Černý, 2020, Antiviral research.

Lack of MERS Coronavirus but Prevalence of Influenza Virus in French Pilgrims after 2013 Hajj

R. Charrel, Z. Memish, D. Raoult, 2014, Emerging infectious diseases.

Respiratory Viruses and Bacteria among Pilgrims during the 2013 Hajj

R. Charrel, Z. Memish, D. Raoult, 2014, Emerging infectious diseases.

Comparison of nasal swabs with throat swabs for the detection of respiratory viruses by real-time reverse transcriptase PCR in adult Hajj pilgrims

R. Charrel, Z. Memish, D. Raoult, 2014, Journal of Infection.

Models cannot predict future outbreaks : A / H 1 N 1 virus , the paradigm 1

R. Charrel, D. Raoult, A. Nougairède, 2017 .

Point of Care Strategy for Rapid Diagnosis of Novel A/H1N1 Influenza Virus

X. de Lamballerie, R. Charrel, D. Raoult, 2010, PloS one.

Point of Care strategy for rapid diagnosis of novel A/H1N1 influenza virus.

X. de Lamballerie, R. Charrel, D. Raoult, 2009, PLoS currents.

Pre-clinical evaluation of antiviral activity of nitazoxanide against SARS-CoV-2

X. de Lamballerie, G. Moureau, E. Chatelain, 2021, bioRxiv.

Identification of dengue type 2 virus in febrile travellers returning from Burkina Faso to France, related to an ongoing outbreak, October to November 2016

R. Charrel, P. Brouqui, M. Million, 2016, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

Lack of nasal carriage of novel corona virus (HCoV‐EMC) in French Hajj pilgrims returning from the Hajj 2012, despite a high rate of respiratory symptoms

R. Charrel, P. Brouqui, P. Parola, 2013, Clinical Microbiology and Infection.

Haiku: New paradigm for the reverse genetics of emerging RNA viruses

X. de Lamballerie, A. Nougairède, S. Priet, 2018, PloS one.

New reverse genetics and transfection methods to rescue arboviruses in mosquito cells

X. de Lamballerie, A. Failloux, A. Nougairède, 2017, Scientific Reports.

Random Codon Re-encoding Induces Stable Reduction of Replicative Fitness of Chikungunya Virus in Primate and Mosquito Cells

E. Holmes, E. Gould, X. de Lamballerie, 2013, PLoS pathogens.

Infections in symptomatic travelers returning from the Arabian peninsula to France: A retrospective cross-sectional study

R. Charrel, P. Brouqui, J. Lagier, 2016, Travel Medicine and Infectious Disease.

Development and Evaluation of a Duo SARS-CoV-2 RT-qPCR Assay Combining Two Assays Approved by the World Health Organization Targeting the Envelope and the RNA-Dependant RNA Polymerase (RdRp) Coding Regions

X. de Lamballerie, R. Charrel, B. Coutard, 2020, Viruses.

Favipiravir antiviral efficacy against SARS-CoV-2 in a hamster model

X. de Lamballerie, G. Moureau, B. Coutard, 2020, Nature Communications.

A Retrospective Overview of Enterovirus Infection Diagnosis and Molecular Epidemiology in the Public Hospitals of Marseille, France (1985–2005)

J. Gaudart, X. de Lamballerie, R. Charrel, 2011, PloS one.

SuPReMe: a rapid reverse genetics method to generate clonal populations of recombinant RNA viruses

X. de Lamballerie, A. Nougairède, F. Aubry, 2018, Emerging Microbes & Infections.

Congenital Lymphocytic Choriomeningitis Virus: A Case of Prenatal Diagnosis

R. Charrel, R. Favre, A. Weingertner, 2018, Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine.

Microcephaly Caused by Lymphocytic Choriomeningitis Virus

R. Charrel, R. Favre, A. Weingertner, 2017, Emerging infectious diseases.

Evolution of Chikungunya virus in mosquito cells

X. de Lamballerie, A. Nougairède, Souand Mohamed Ali, 2018, Scientific Reports.

Need for a Standardized Translational Drug Development Platform: Lessons Learned from the Repurposing of Drugs for COVID-19

G. Moureau, B. Weynand, E. Chatelain, 2022, Microorganisms.

Preclinical evaluation of Imatinib does not support its use as an antiviral drug against SARS-CoV-2

X. de Lamballerie, G. Moureau, F. Touret, 2020, bioRxiv.

Influenza vaccine for Hajj and Umrah pilgrims

R. Charrel, D. Raoult, P. Brouqui, 2015, The Lancet Infectious Diseases.

Differential Susceptibility and Innate Immune Response of Aedes aegypti and Aedes albopictus to the Haitian Strain of the Mayaro Virus

D. Missé, F. Liégeois, C. Diagne, 2019, Viruses.

SARS-CoV-2 20I/501Y.V1 variant in the hamster model

X. de Lamballerie, G. Moureau, P. Maes, 2021, bioRxiv.

Circulation of enterovirus A71 during 2019–2020, Marseille, France

A. Nougairède, C. Zandotti, P. Minodier, 2021, Journal of medical virology.

An E460D Substitution in the NS5 Protein of Tick-Borne Encephalitis Virus Confers Resistance to the Inhibitor Galidesivir (BCX4430) and Also Attenuates the Virus for Mice

E. Gould, X. de Lamballerie, E. De Clercq, 2019, Journal of Virology.

Complete Genome of a Genotype I Japanese Encephalitis Virus Isolated from a Patient with Encephalitis in Vientiane, Lao PDR

X. de Lamballerie, R. Charrel, P. Newton, 2013, Genome Announcements.

The SARS-CoV-2 Alpha variant exhibits comparable fitness to the D614G strain in a Syrian hamster model

X. de Lamballerie, G. Moureau, P. Maes, 2022, Communications Biology.

Hydroxychloroquine and azithromycin used alone or combined are not effective against SARS-CoV-2 ex vivo and in a hamster model

X. de Lamballerie, G. Moureau, F. Touret, 2021, Antiviral Research.

Infectious Subgenomic Amplicons method to expedite reverse genetics of SARS-CoV-2 and other coronaviruses

B. Coutard, F. Touret, A. Nougairède, 2020 .

Prospective and retrospective evaluation of the Cepheid Xpert® Flu/RSV XC assay for rapid detection of influenza A, influenza B, and respiratory syncytial virus

X. de Lamballerie, R. Charrel, A. Nougairède, 2015, Diagnostic Microbiology and Infectious Disease.

In vitro activity of therapeutic antibodies against SARS-CoV-2 Omicron BA.1, BA.2 and BA.5

X. de Lamballerie, F. Touret, A. Nougairède, 2022, Scientific Reports.

Influenza-induced acute respiratory distress syndrome during the 2010-2016 seasons: bacterial co-infections and outcomes by virus type and subtype.

X. de Lamballerie, L. Papazian, B. Lina, 2020, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Investigation of Bufavirus and Parvovirus 4 in Patients with Gastro-Enteritis from the South-East of France

R. Charrel, A. Nougairède, L. Thirion, 2021, Pathogens.

A Bioluminescent 3CLPro Activity Assay to Monitor SARS-CoV-2 Replication and Identify Inhibitors

P. Vidalain, P. André, V. Lotteau, 2021, Viruses.

Antiviral efficacy of favipiravir against Zika and SARS-CoV-2 viruses in non-human primates

P. Roques, V. Contreras, S. van der Werf, 2022, Nature Communications.

Complete Coding Sequences of Two Dengue Virus Type 2 Strains Isolated from an Outbreak in Burkina Faso in 2016

R. Charrel, F. Touret, A. Nougairède, 2017, Genome Announcements.

Niclosamide shows strong antiviral activity in a human airway model of SARS-CoV-2 infection and a conserved potency against the UK B.1.1.7 and SA B.1.351 variant

M. Sommer, B. Hoen, F. Touret, 2021, bioRxiv.

Impact of diagnostic procedures on patient management and hospitalization cost during the 2000 and 2005 enterovirus epidemics in Marseilles, France.

R. Charrel, H. Richet, A. Nougairède, 2010, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Interim report on the A/H1N1 influenza virus pandemic in Marseille, France, April-November 2009

R. Charrel, B. La Scola, S. Thiberville, 2010, Clinical Microbiology and Infection.

Chikungunya Virus Transmission Potential by Local Aedes Mosquitoes in the Americas and Europe

L. P. Lounibos, J. Gustave, R. Lourenço-de-Oliveira, 2015, PLoS neglected tropical diseases.

Japanese Encephalitis Virus Tropism and Vector-free Transmission in Experimentally Infected Pigs

R. Charrel, A. Nougairède, A. Oevermann, 2017 .

Outbreak of adenovirus type 1 severe pneumonia in a French intensive care unit, September-October 2012.

P. Fournier, L. Papazian, A. Nougairède, 2014, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

Sheep-to-Human Transmission of Orf Virus during Eid al-Adha Religious Practices, France

R. Charrel, A. Nougairède, C. Zandotti, 2013, Emerging infectious diseases.

2012 outbreak of acute haemorrhagic conjunctivitis in Indian Ocean Islands: identification of Coxsackievirus A24 in a returned traveller.

P. Brouqui, P. Parola, P. Gautret, 2012, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

A simple reverse genetics method to generate recombinant coronaviruses

B. Coutard, F. Touret, A. Nougairède, 2021, EMBO reports.

Favipiravir and severe acute respiratory syndrome coronavirus 2 in hamster model

G. Moureau, B. Coutard, F. Touret, 2020, bioRxiv.

In vitro screening of a FDA approved chemical library reveals potential inhibitors of SARS-CoV-2 replication

Bruno Coutard, J. van Helden, B. Coutard, 2020, Scientific Reports.

Favipiravir Inhibits Mayaro Virus Infection in Mice

D. Missé, F. Liégeois, P. Roques, 2021, Viruses.

Niclosamide shows strong antiviral activity in a human airway model of SARS-CoV-2 infection and a conserved potency against the Alpha (B.1.1.7), Beta (B.1.351) and Delta variant (B.1.617.2)

B. Hoen, F. Touret, A. Nougairède, 2021, PloS one.

Alpha variant versus D614G strain in the Syrian hamster model/ en

G. Moureau, P. Maes, J. Neyts, 2021 .

The genetic evolution of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)

G. Moureau, P. Maes, J. Neyts, 2021 .

Live Zika virus chimeric vaccine candidate based on a yellow fever 17-D attenuated backbone

F. Touret, A. Nougairède, R. Klitting, 2018, bioRxiv.

Chikungunya in the Americas

S. Cassadou, A. Nougairède, I. Leparc-Goffart, 2014, The Lancet.

RNA and DNA Bacteriophages as Molecular Diagnosis Controls in Clinical Virology: A Comprehensive Study of More than 45,000 Routine PCR Tests

R. Charrel, A. Nougairède, C. Zandotti, 2011, PloS one.

Sotrovimab retains activity against SARS-CoV-2 Omicron variant BQ.1.1 in a non-human primate model

S. van der Werf, F. Touret, A. Nougairède, 2023, bioRxiv.

Isolation of Toscana virus from the cerebrospinal fluid of a man with meningitis in Marseille, France, 2010.

R. Charrel, P. Brouqui, L. Bichaud, 2013, Vector borne and zoonotic diseases.

New Insights into Flavivirus Evolution, Taxonomy and Biogeographic History, Extended by Analysis of Canonical and Alternative Coding Sequences

P. Lemey, E. Gould, G. Moureau, 2015, PloS one.

Mayaro Virus Infects Human Chondrocytes and Induces the Expression of Arthritis-Related Genes Associated with Joint Degradation

D. Missé, F. Liégeois, C. Bisbal, 2019, Viruses.

Widespread circulation of a new echovirus 30 variant causing aseptic meningitis and non-specific viral illness, South-East France, 2013.

R. Charrel, S. Thiberville, A. Nougairède, 2014, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

Evolution of Chikungunya virus in mosquito cells

A. Nougairède, Souand Mohamed Ali, A. Amroun, 2018, Scientific Reports.

Attenuation of Tick-Borne Encephalitis Virus Using Large-Scale Random Codon Re-encoding

E. Gould, A. Nougairède, F. Aubry, 2015, PLoS pathogens.

Arenaviruses and hantaviruses: from epidemiology and genomics to antivirals.

R. Charrel, B. Coutard, C. Schmidt, 2011, Antiviral research.

Molecular Comparison and Evolutionary Analyses of VP1 Nucleotide Sequences of New African Human Enterovirus 71 Isolates Reveal a Wide Genetic Diversity

J. Héraud, A. Nougairède, J. Bailly, 2014, PloS one.

Single-stranded positive-sense RNA viruses generated in days using infectious subgenomic amplicons

E. Gould, A. Nougairède, G. Quérat, 2014, The Journal of general virology.

A novel and sensitive real-time PCR system for universal detection of poxviruses

R. Charrel, C. Peyrefitte, O. Ferraris, 2021, Scientific reports.

A one health approach to investigating an outbreak of alimentary tick-borne encephalitis in a non-endemic area in France (Ain, Eastern France): a longitudinal serological study in livestock, detection in ticks, and the first TBE virus isolation and molecular characterization

G. Grard, C. Mainguet, N. Dheilly, 2021, medRxiv.

Mayaro Virus Infects Human Brain Cells and Induces a Potent Antiviral Response in Human Astrocytes

D. Missé, F. Liégeois, S. Salinas, 2021, Viruses.

First Reported Chikungunya Fever Outbreak in the Republic of Congo, 2011

M. Capobianchi, S. Thiberville, Nanikaly Moyen, 2014, PloS one.

Novel Virus Influenza A (H1N1sw) in South-Eastern France, April-August 2009

R. Charrel, D. Raoult, N. Resseguier, 2010, PloS one.

Reverse Genetics of RNA Viruses: ISA-Based Approach to Control Viral Population Diversity without Modifying Virus Phenotype

G. Moureau, A. Nougairède, J. Driouich, 2019, Viruses.

Likely Correlation between Sources of Information and Acceptability of A/H1N1 Swine-Origin Influenza Virus Vaccine in Marseille, France

E. Gould, R. Charrel, D. Raoult, 2010, PloS one.

Zika virus differentially infects human neural progenitor cells according to their state of differentiation and dysregulates neurogenesis through the Notch pathway

D. Missé, L. Nguyen, C. Montero-Menei, 2019, Emerging microbes & infections.

Flavivirus reverse genetic systems, construction techniques and applications: A historical perspective

E. Gould, A. Nougairède, F. Aubry, 2014, Antiviral Research.

Role of host cell factors in flavivirus infection: Implications for pathogenesis and development of antiviral drugs.

E. Gould, A. Nougairède, B. Pastorino, 2010, Antiviral research.

How Did Zika Virus Emerge in the Pacific Islands and Latin America?

E. Gould, R. Charrel, S. Seligman, 2016, mBio.

Rapid reconstruction of porcine reproductive and respiratory syndrome virus using synthetic DNA fragments

A. Nougairède, J. Mélade, G. Piorkowski, 2021, Computational and structural biotechnology journal.

Fatal underhanded chronic enterovirus infection associated with anti-CD20 monotherapy for central nervous system demyelinating disease

B. Coutard, H. Lepidi, A. Nougairède, 2020, Multiple sclerosis.

Air pollution and children’s asthma-related emergency hospital visits in southeastern France

J. Gaudart, J. Dubus, A. Nougairède, 2017, European Journal of Pediatrics.

Circulation of Respiratory Viruses Among Pilgrims During the 2012 Hajj Pilgrimage

Philippe Brouqui, Nicolas Salez, Ziad A Memish, 2013, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Replicative Fitness of a SARS-CoV-2 20I/501Y.V1 Variant from Lineage B.1.1.7 in Human Reconstituted Bronchial Epithelium

F. Touret, A. Nougairède, C. Baronti, 2021, mBio.

Dengue Virus Type 1 Infection in Traveler Returning from Benin to France, 2019

A. Nougairède, C. Zandotti, I. Leparc-Goffart, 2020, Emerging infectious diseases.

Utilisation of ISA Reverse Genetics and Large-Scale Random Codon Re-Encoding to Produce Attenuated Strains of Tick-Borne Encephalitis Virus within Days

E. Gould, A. Nougairède, F. Aubry, 2016, PloS one.

“ISA-Lation” of Single-Stranded Positive-Sense RNA Viruses from Non-Infectious Clinical/Animal Samples

E. Gould, A. Nougairède, G. Piorkowski, 2015, PloS one.

COVID‐19 pandemic and its consequences disrupt epidemiology of enterovirus meningitis, South–East France

A. Nougairède, C. Zandotti, L. Ninove, 2021, Journal of medical virology.

Xpert Flu for point-of-care diagnosis of human influenza in industrialized countries

R. Charrel, A. Nougairède, C. Zandotti, 2014, Expert review of molecular diagnostics.

Improving the diagnostic efficiency of H1N1 2009 pandemic flu: analysis of predictive clinical signs through a prospective cohort.

R. Charrel, D. Raoult, P. Brouqui, 2009, PLoS currents.

Replicative fitness SARS-CoV-2 20I/501Y.V1 variant in a human reconstituted bronchial epithelium

F. Touret, A. Nougairède, C. Baronti, 2021, bioRxiv.

Comparison of chikungunya viruses generated using infectious clone or the Infectious Subgenomic Amplicons (ISA) method in Aedes mosquitoes

A. Failloux, A. Vega-Rúa, A. Nougairède, 2018, PloS one.

Revolutionizing Clinical Microbiology Laboratory Organization in Hospitals with In Situ Point-of-Care

Didier Raoult, Michel Drancourt, R. Charrel, 2011, PloS one.

A simple method for molecular detection of Swine-origin and human-origin influenza a virus.

A. Flahault, E. Gould, R. Charrel, 2010, Vector borne and zoonotic diseases.

Activity of Sotrovimab against BQ.1.1 and XBB.1 Omicron sublineages in a hamster model

F. Touret, A. Nougairède, O. Bernadin, 2023, bioRxiv.

In vivo activity of Sotrovimab against BQ.1.1 Omicron sublineage (preprint)

F. Touret, A. Nougairède, X. Lamballerie, 2023 .

Evaluation of the Ridaquick Rotavirus/Adenovirus Immuno-Chromatographic Assay in Real-Life Situation

R. Charrel, A. Nougairède, C. Zandotti, 2021, Pathogens.

Serological study of the 2009 pandemic due to influenza A H1N1 in the metropolitan French population.

A. Flahault, R. Charrel, B. Lina, 2012, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Fulminant Hepatitis Due to Father-to-Newborn Transmission of Herpes Simplex Virus type 1

R. Charrel, A. Nougairède, C. Zandotti, 2013, The open virology journal.

Arenaviruses and hantaviruses: from epidemiology and genomics to antivirals.

R. Charrel, B. Coutard, B. Canard, 2011, Antiviral research.

Simple reverse genetics systems for Asian and African Zika viruses

A. Nougairède, C. Baronti, Thérèse Atieh, 2016, Scientific Reports.

Generation and evaluation of protease inhibitor-resistant SARS-CoV-2 strains

E. Chatelain, F. Touret, A. Nougairède, 2024, bioRxiv.

Further preclinical characterization of molnupiravir against SARS-CoV-2 : Antiviral activity determinants and viral genome alteration patterns.

F. Touret, A. Nougairède, C. Laprie, 2024, Heliyon.

Outbreak of Adenovirus D8 in a Neonatal Intensive Care Unit involving multiple simultaneous transmission pathways.

R. Charrel, S. Schipani, F. Fenollar, 2023, The Journal of hospital infection.

In vivo rescue of arboviruses directly from subgenomic DNA fragments

G. Moureau, A. Nougairède, M. Cochin, 2024, bioRxiv.

Comparative detection of enterovirus RNA in cerebrospinal fluid: GeneXpert system vs. real-time RT-PCR assay.

A. Nougairède, C. Zandotti, L. Ninove, 2011, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.