Alyssa J. Lawler

发表

Cell Type-Specific Oxidative Stress Genomic Signatures in the Globus Pallidus of Dopamine-Depleted Mice

Andreas R. Pfenning, A. Gittis, Alyssa J. Lawler, 2020, The Journal of Neuroscience.

Predicting lineage-specific differences in open chromatin across dozens of mammalian genomes 2 3

Andreas R. Pfenning, Irene M. Kaplow, Morgan E. Wirthlin, 2020 .

Addiction-Associated Genetic Variants Implicate Brain Cell Type- and Region-Specific Cis-Regulatory Elements in Addiction Neurobiology

Andreas R. Pfenning, BaDoi N. Phan, Irene M. Kaplow, 2020, The Journal of Neuroscience.

The Regulatory Evolution of the Primate Fine-Motor System

Andreas R. Pfenning, William R. Stauffer, BaDoi N. Phan, 2020, bioRxiv.

Machine learning sequence prioritization for cell type-specific enhancer design.

Andreas R. Pfenning, BaDoi N. Phan, Irene M. Kaplow, 2022, eLife.

Relating enhancer genetic variation across mammals to complex phenotypes using machine learning

Andreas R. Pfenning, BaDoi N. Phan, Irene M. Kaplow, 2022, bioRxiv.

An in vivo massively parallel platform for deciphering tissue-specific regulatory function

Andreas R. Pfenning, BaDoi N. Phan, Irene M. Kaplow, 2022, bioRxiv.

Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements

Andreas R. Pfenning, Julie E. Elie, Irene M. Kaplow, 2022, bioRxiv.

Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin

Andreas R. Pfenning, Irene M. Kaplow, Morgan E. Wirthlin, 2020, bioRxiv.

Machine learning sequence prioritization for cell type-specific enhancer design

Andreas R. Pfenning, Irene M. Kaplow, Morgan E. Wirthlin, 2021, bioRxiv.

Evolutionary constraint and innovation across hundreds of placental mammals

Voichita D. Marinescu, Andreas R. Pfenning, Graham M. Hughes, 2023, bioRxiv.

Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease

Voichita D. Marinescu, Andreas R. Pfenning, Graham M. Hughes, 2023, bioRxiv.

Molecular and morphometric data suggest the presence of a neglected species in the marine gastropod family Conidae.

Alyssa J. Lawler, T. Duda, 2017, Molecular phylogenetics and evolution.

The functional and evolutionary impacts of human-specific deletions in conserved elements

Voichita D. Marinescu, Andreas R. Pfenning, Graham M. Hughes, 2023, Science.

The contribution of historical processes to contemporary extinction risk in placental mammals

Voichita D. Marinescu, Andreas R. Pfenning, Graham M. Hughes, 2023, Science.

Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs

Voichita D. Marinescu, Gavin J. Svenson, Andreas R. Pfenning, 2023, Science.

Insights into mammalian TE diversity through the curation of 248 genome assemblies

Voichita D. Marinescu, Andreas R. Pfenning, Matthew G. Johnson, 2023, Science.

Mammalian evolution of human cis-regulatory elements and transcription factor binding sites

Voichita D. Marinescu, Andreas R. Pfenning, Graham M. Hughes, 2023, Science.

Insights into mammalian TE diversity through the curation of 248 genome assemblies

Voichita D. Marinescu, Andreas R. Pfenning, Matthew G. Johnson, 2023, Science.

Evolutionary constraint and innovation across hundreds of placental mammals

Voichita D. Marinescu, Andreas R. Pfenning, BaDoi N. Phan, 2023, Science.

Relating enhancer genetic variation across mammals to complex phenotypes using machine learning

Andreas R. Pfenning, BaDoi N. Phan, Irene M. Kaplow, 2023, Science.

Vocal learning–associated convergent evolution in mammalian proteins and regulatory elements

Voichita D. Marinescu, Andreas R. Pfenning, BaDoi N. Phan, 2024, Science.

Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin

Andreas R. Pfenning, Irene M. Kaplow, Morgan E. Wirthlin, 2022, BMC Genomics.

Predicting lineage-specific differences in open chromatin across dozens of mammalian genomes

Andreas R. Pfenning, Irene M. Kaplow, Morgan E. Wirthlin, 2021 .