Franziska Hufsky

发表

The International Virus Bioinformatics Meeting 2020

Irmtraud M. Meyer, I. Meyer, N. Beerenwinkel, 2020, Viruses.

Identifying the unknowns by aligning fragmentation trees.

Thomas Zichner, Florian Rasche, Sebastian Böcker, 2012, Analytical chemistry.

Mining molecular structure databases: Identification of small molecules based on fragmentation mass spectrometry data.

Sebastian Böcker, Franziska Hufsky, S. Böcker, 2017, Mass spectrometry reviews.

De novo analysis of electron impact mass spectra using fragmentation trees.

Florian Rasche, Martin Rempt, Sebastian Böcker, 2012, Analytica chimica acta.

Computational mass spectrometry for small

Franziska Hufsky, 2013 .

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

Sita J. Saunders, Michael T. Wolfinger, Andrea Tanzer, 2016, Scientific Reports.

Mending the pieces: Computational mass spectrometry for small molecule fragmentation

Franziska Hufsky, Kerstin Scheubert, 2015 .

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Eric P. Nawrocki, Anton I. Petrov, Joshua B. Singer, 2020, Briefings Bioinform..

Women in the European Virus Bioinformatics Center

Irmtraud M. Meyer, I. Meyer, K. Metzner, 2022, Viruses.

The Role of Non-Coding RNAs in the Human Placenta

M. Marz, U. Markert, Franziska Hufsky, 2022, Cells.

Massive Effect on LncRNAs in Human Monocytes During Fungal and Bacterial Infections and in Response to Vitamins A and D

M. Marz, Emanuel Barth, T. Klassert, 2017, Scientific Reports.

BIOINFORMATICS Fast alignment of fragmentation trees

S. Böcker, F. Rasche, Kai Dührkop, 2012 .

The International Virus Bioinformatics Meeting 2022

P. Lemey, E. Domingo, F. Weber, 2022, Viruses.

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Robert D. Finn, Alex Bateman, Niko Beerenwinkel, 2020, Briefings Bioinform..

Novel methods for the analysis of small molecule fragmentation mass spectra

Franziska Hufsky, Franziska Hufsky, 2014 .

The Third Annual Meeting of the European Virus Bioinformatics Center

Martha R. J. Clokie, Evelien M. Adriaenssens, P. Simmonds, 2019, Viruses.

A new era of virus bioinformatics.

Martin Beer, Manja Marz, Bashar Ibrahim, 2018, Virus research.

Virologists—Heroes need weapons

Philippe Le Mercier, M. Beer, B. Ibrahim, 2018, PLoS pathogens.

Determination of ¹⁵N-incorporation into plant proteins and their absolute quantitation: a new tool to study nitrogen flux dynamics and protein pool sizes elicited by plant-herbivore interactions.

S. Böcker, I. Baldwin, K. Groten, 2012, Journal of proteome research.

New kids on the block: novel informatics methods for natural product discovery.

Sebastian Böcker, Franziska Hufsky, Kerstin Scheubert, 2014, Natural product reports.

Computational mass spectrometry for small-molecule fragmentation

Sebastian Böcker, Franziska Hufsky, Kerstin Scheubert, 2014 .

Significance estimation for large scale metabolomics annotations by spectral matching

S. Böcker, P. Dorrestein, Kai Dührkop, 2017, Nature Communications.

Significance estimation for large scale untargeted metabolomics annotations

Nuno Bandeira, Mingxun Wang, Pieter C Dorrestein, 2017, bioRxiv.

Computational mass spectrometry for small molecules

Sebastian Böcker, Franziska Hufsky, Kerstin Scheubert, 2013, Journal of Cheminformatics.

Fast alignment of fragmentation trees

Markus Chimani, Florian Rasche, Sebastian Böcker, 2012, Bioinform..

Predicting the Presence of Uncommon Elements in Unknown Biomolecules from Isotope Patterns.

Sebastian Böcker, Rolf Müller, Franziska Hufsky, 2016, Analytical chemistry.

Comparing Fragmentation Trees from Electron Impact Mass Spectra with Annotated Fragmentation Pathways

Sebastian Böcker, Franziska Hufsky, S. Böcker, 2012, GCB.

Computing Fragmentation Trees from Metabolite Multiple Mass Spectrometry Data

Florian Rasche, Sebastian Böcker, Franziska Hufsky, 2011, RECOMB.

Molecular Formula Identification Using Isotope Pattern Analysis and Calculation of Fragmentation Trees.

Sebastian Böcker, Kai Dührkop, Franziska Hufsky, 2014, Mass spectrometry.

Multiple Mass Spectrometry Fragmentation Trees Revisited: Boosting Performance and Quality

Sebastian Böcker, Franziska Hufsky, Kerstin Scheubert, 2014, WABI.

Finding Characteristic Substructures for Metabolite Classes

Sebastian Böcker, Samy Elshamy, Marcus Ludwig, 2012, GCB.

A new era of virus bioinformatics.

Philippe Le Mercier, M. Beer, B. Ibrahim, 2018, Virus research.

Bioinformatics Analysis of Heterogeneous Data Reveals Characteristic Mutational Landscapes of Neuroblastoma Relapses

Christian W. Remmele, D. Marquard, P. Lindner, 2015 .

Predicting the Presence of Uncommon Elements in Unknown Biomolecules from Isotope Patterns.

R. Müller, Marvin Meusel, Franziska Hufsky, 2016, Analytical chemistry.

The International Virus Bioinformatics Meeting 2023

Rajitha Yasas Wijesekara, M. Marz, W. Randazzo, 2023, Viruses.