André Gohr

发表

An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms

B. Blencowe, Xinchen Wang, Kevin C. H. Ha, 2017, Genome Research.

On the Value of Intra-Motif Dependencies of Human Insulator Protein CTCF

J. Keilwagen, S. Posch, I. Grosse, 2014, PloS one.

A developmentally programmed splicing failure attenuates the DNA damage response during mammalian zygotic genome activation

O. Bogdanović, M. Irimia, S. Bonnal, 2020, bioRxiv.

IRF7 expression correlates with HIV latency reversal upon specific blockade of immune activation

B. Clotet, J. Martinez-Picado, M. Massanella, 2022, Frontiers in Immunology.

Insplico: Effective computational tool for studying intron splicing order genome-wide with short and long RNA-seq reads

M. Irimia, S. Bonnal, André Gohr, 2022, bioRxiv.

Multicomponent reactions for the synthesis of multifunctional agents with activity against cancer cells.

L. Wessjohann, André Gohr, C. Jacob, 2009, Chemical communications.

An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms

B. Blencowe, Xinchen Wang, Kevin C. H. Ha, 2017, Genome research.

Molecular basis of differential 3′ splice site sensitivity to anti-tumor drugs targeting U2 snRNP

J. Valcárcel, M. Irimia, André Gohr, 2017, Nature Communications.

Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes

J. Garcia-Fernández, M. Arnone, A. Spagnuolo, 2017, Nature Communications.

Molecular basis of differential 3′ splice site sensitivity to anti-tumor drugs targeting U2 snRNP

J. Valcárcel, M. Irimia, André Gohr, 2017, Nature Communications.

Probabilistic approaches to transcription factor binding site prediction.

Jens Keilwagen, Ivo Grosse, Jan Grau, 2010, Methods in molecular biology.

Identification of transcription factor binding sites with variable-order Bayesian networks

Armin Shmilovici, Ivo Grosse, Stefan Posch, 2005, Bioinform..

Exon Junction Complex Shapes the Transcriptome by Repressing Recursive Splicing

Nejc Haberman, Christopher R. Sibley, Rupert Faraway, 2018, Molecular cell.

The X-linked splicing regulator MBNL3 has been co-opted to restrict placental growth in eutherians

T. Hughes, Q. Morris, D. Ray, 2021, bioRxiv.

RES complex is associated with intron definition and required for zebrafish early embryogenesis

M. Moreno-Mateos, Juan P. Fernández, M. Irimia, 2017, bioRxiv.

Matt: Unix tools for alternative splicing analysis

André Gohr, Manuel Irimia, M. Irimia, 2018, Bioinform..

A developmentally programmed splicing failure contributes to DNA damage response attenuation during mammalian zygotic genome activation

O. Bogdanović, M. Irimia, S. Bonnal, 2022, Science advances.

Divergent Evolution of the Transcriptional Network Controlled by Snf1-Interacting Protein Sip4 in Budding Yeasts

Ioana M. Lemnian, I. Grosse, André Gohr, 2015, PloS one.

Topic Evolution in a Stream of Documents

Myra Spiliopoulou, Alexander Hinneburg, André Gohr, 2009, SDM.

Insplico: effective computational tool for studying splicing order of adjacent introns genome-wide with short and long RNA-seq reads

M. Irimia, S. Bonnal, André Gohr, 2023, Nucleic acids research.

Parsimonious Higher-Order Hidden Markov Models for Improved Array-CGH Analysis with Applications to Arabidopsis thaliana

Michael Seifert, Marc Strickert, Ivo Grosse, 2012, PLoS Comput. Biol..

SF3B1 mutation–mediated sensitization to H3B-8800 splicing inhibitor in chronic lymphocytic leukemia

J. Valcárcel, M. Aymerich, D. Colomer, 2023, Life Science Alliance.

Visually summarizing the Evolution of Documents under a Social Tag

Myra Spiliopoulou, Alexander Hinneburg, André Gohr, 2018, LWA.

Visually Summarizing Semantic Evolution in Document Streams with Topic Table

Myra Spiliopoulou, Alexander Hinneburg, André Gohr, 2010, IC3K.

Bayesian Folding-In with Dirichlet Kernels for PLSI

Alexander Hinneburg, André Gohr, Hans-Henning Gabriel, 2007, Seventh IEEE International Conference on Data Mining (ICDM 2007).

Jstacs: A Java Framework for Statistical Analysis and Classification of Biological Sequences

Jens Keilwagen, Ivo Grosse, Stefan Posch, 2012, J. Mach. Learn. Res..

Recognition of cis-Regulatory Elements with Vombat

Alexander E. Kel, Ivo Grosse, Stefan Posch, 2007, J. Bioinform. Comput. Biol..

Matt : Unix tools for splicing analysis

André Gohr, 2019 .

Inhomogeneous Parsimonious Markov Models

Edgar Wingender, Ivo Grosse, Ralf Eggeling, 2013, ECML/PKDD.

Multicomponent reactions for the synthesis of multifunctional agents with activity against cancer cells.

L. Wessjohann, André Gohr, C. Jacob, 2009, Chemical communications.

Dispom: a Discriminative de-novo Motif Discovery Tool Based on the Jstacs Library

Michael Seifert, Jens Keilwagen, Marc Strickert, 2013, J. Bioinform. Comput. Biol..