P. Gerlee

发表

An evolutionary hybrid cellular automaton model of solid tumour growth.

A. Anderson, P. Gerlee, A. Anderson, 2007, Journal of theoretical biology.

Stability analysis of a hybrid cellular automaton model of cell colony growth.

A. Anderson, P. Gerlee, Alexander R. A. Anderson, 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.

Modelling of Cancer Growth, Evolution and Invasion: Bridging Scales and Models

V. Quaranta, A. Anderson, K. Rejniak, 2007 .

A hybrid cellular automaton model of clonal evolution in cancer: the emergence of the glycolytic phenotype.

A. Anderson, P. Gerlee, A. Anderson, 2008, Journal of theoretical biology.

Invasion emerges from cancer cell adaptation to competitive microenvironments: quantitative predictions from multiscale mathematical models.

V. Quaranta, A. Anderson, K. Rejniak, 2008, Seminars in Cancer Biology.

Microenvironment driven invasion: a multiscale multimodel investigation

V. Quaranta, A. Anderson, K. Rejniak, 2009, Journal of mathematical biology.

A spatial model of tumor-host interaction: application of chemotherapy.

Jason M. Graham, K. Swanson, V. Quaranta, 2008, Mathematical biosciences and engineering : MBE.

Evolution of cell motility in an individual-based model of tumour growth.

A. Anderson, P. Gerlee, A. Anderson, 2009, Journal of theoretical biology.

Predicting regional COVID-19 hospital admissions in Sweden using mobility data

T. Timpka, T. Lundh, A. Jöud, 2021, Scientific Reports.

Extinction times in diffusive public good population dynamics

Gregory J. Kimmel, P. Altrock, P. Gerlee, 2018, bioRxiv.

The impact of cellular characteristics on the evolution of shape homeostasis

A. Anderson, D. Basanta, P. Gerlee, 2015, 1512.02474.

Gene divergence and pathway duplication in the metabolic network of yeast and digital organisms

Bo Zhang, A. Anderson, T. Lundh, 2009, Journal of The Royal Society Interface.

Travelling wave analysis of a mathematical model of glioblastoma growth.

Philip Gerlee, Sven Nelander, S. Nelander, 2013, Mathematical biosciences.

Bridging scales in cancer progression: mapping genotype to phenotype using neural networks.

Philip Gerlee, Alexander R A Anderson, A. Anderson, 2014, Seminars in cancer biology.

A Stochastic Model of Glioblastoma Invasion: The Impact of Phenotypic Switching

S. Nelander, P. Gerlee, 2014 .

Mathematical Modeling of the Metastatic Process

Jacob G. Scott, P. Maini, A. Anderson, 2013, 1305.4622.

The evolution of carrying capacity in constrained and expanding tumour cell populations

A. Anderson, P. Gerlee, A. Anderson, 2014, Physical biology.

Neighborhood size-effects shape growing population dynamics in evolutionary public goods games

Gregory J. Kimmel, Joel s. Brown, P. Altrock, 2019, Communications Biology.

Cell polarisation in a bulk-surface model can be driven by both classic and non-classic Turing instability

A. Logg, M. Cvijovic, P. Gerlee, 2020, npj Systems Biology and Applications.

Searching for Synergies: Matrix Algebraic Approaches for Efficient Pair Screening

Rebecka Jörnsten, S. Nelander, T. Kling, 2013, PloS one.

Evolution, regulation and disruption of homeostasis and its role in carcinogenesis

A. Anderson, D. Basanta, K. Rejniak, 2010 .

Using neural networks to bridge scales in cancer: Mapping signaling pathways to phenotypes

A. Anderson, P. Gerlee, Eunjung Kim, 2018, bioRxiv.

Structural correlations in bacterial metabolic networks

Sebastian Bernhardsson, L. Lizana, P. Gerlee, 2011, BMC Evolutionary Biology.

Model-based inference of metastatic seeding rates in de novo metastatic breast cancer reveals the impact of secondary seeding and molecular subtype

P. Gerlee, N. Vitos, 2022, Scientific Reports.

Persistence of cooperation in diffusive public goods games.

P. Altrock, P. Gerlee, 2019, Physical review. E.

Directional variation in evolution: consequences for the fitness landscape metaphor

P. Gerlee, 2015, bioRxiv.

Persistence of cooperation in diffusive public goods games

P. Altrock, P. Gerlee, 2018 .

Ladderpath Approach: How Tinkering and Reuse Increase Complexity and Information

Z. Di, P. Gerlee, Yu Liu, 2022, Entropy.

Introduction : Why use mathematical models ?

Jacob G. Scott, P. Maini, D. Basanta, 2013 .

Mathematical modelling of cell migration: stiffness dependent jump rates result in durotaxis

P. Gerlee, A. Malik, Adam A. Malik, 2019, Journal of Mathematical Biology.

Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

Jacob G. Scott, M. Nykter, P. Somervuo, 2023, bioRxiv.

Estimating the SARS-CoV-2 infected population fraction and the infection-to-fatality ratio: a data-driven case study based on Swedish time series data

F. Gustafsson, A. Wacker, A. Jöud, 2021, Scientific Reports.

Comparative drug pair screening across multiple glioblastoma cell lines reveals novel drug-drug interactions.

S. Nelander, T. Kling, B. Westermark, 2013, Neuro-oncology.

The Impact of Phenotypic Switching on Glioblastoma Growth and Invasion

Philip Gerlee, Sven Nelander, S. Nelander, 2012, PLoS Comput. Biol..

Evolving Homeostatic Tissue Using Genetic Algorithms

Alexander R. A. Anderson, David Basanta, Philip Gerlee, 2011, ALIFE.

The model muddle: in search of tumor growth laws.

Philip Gerlee, P. Gerlee, 2012, Cancer research.

PRODUCTIVITY AND DIVERSITY IN A CROSS‐FEEDING POPULATION OF ARTIFICIAL ORGANISMS

Philip Gerlee, Torbjörn Lundh, T. Lundh, 2010, Evolution; international journal of organic evolution.

Modelling evolutionary cell behaviour using neural networks: Application to tumour growth

Alexander R. A. Anderson, Philip Gerlee, P. Gerlee, 2009, Biosyst..

Neighborhood size-effects in nonlinear public goods games

Gregory J. Kimmel, Joel s. Brown, P. Altrock, 2018, bioRxiv.

Autocrine signaling can explain the emergence of Allee effects in cancer cell populations

P. Altrock, P. Gerlee, C. Krona, 2021, bioRxiv.

Computational models predicting the early development of the COVID-19 pandemic in Sweden: systematic review, data synthesis, and secondary validation of accuracy

T. Timpka, A. Jöud, P. Gerlee, 2022, Scientific Reports.

Extinction rates in tumour public goods games

P. Altrock, P. Gerlee, 2017, Journal of The Royal Society Interface.

Extinction rates in tumor public goods games

P. Altrock, P. Gerlee, 2017, bioRxiv.

Pathway identification by network pruning in the metabolic network of Escherichia coli

Kim Sneppen, Philip Gerlee, L. Lizana, 2009, Bioinform..

Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

Jacob G. Scott, M. Nykter, P. Somervuo, 2023, bioRxiv.

The Impact of Elastic Deformations of the Extracellular Matrix on Cell Migration

P. Gerlee, B. Wennberg, A. A. Malik, 2020, Bulletin of Mathematical Biology.

Mathematical modelling of cell migration: stiffness dependent jump rates result in durotaxis

P. Gerlee, A. Malik, 2019, Journal of mathematical biology.

Inference of glioblastoma migration and proliferation rates using single time-point images

P. Gerlee, Emil Rosén, C. Krona, 2023, Communications biology.

Inferring rates of metastatic dissemination using stochastic network models

Philip Gerlee, Mia Johansson, P. Gerlee, 2018, bioRxiv.

Nowcasting (Short-Term Forecasting) of COVID-19 Hospitalizations Using Syndromic Healthcare Data, Sweden, 2020

T. Timpka, T. Lundh, H. Eriksson, 2022, Emerging infectious diseases.

Evolutionary dynamics of shared niche construction

Alexander R. A. Anderson, Philip Gerlee, P. Gerlee, 2014, bioRxiv.

Diffusion-limited tumour growth: simulations and analysis.

P. Gerlee, A. Anderson, 2010, Mathematical biosciences and engineering : MBE.

Estimating the probability of coexistence in cross-feeding communities.

Philip Gerlee, Torbjörn Lundh, T. Lundh, 2015, Journal of theoretical biology.

SP-0013: A mathematical model of tumor self-seeding reveals secondary metastatic deposits as drivers of primary tumor growth

David Basanta, Alexander R. A. Anderson, Jacob G. Scott, 2013 .

A mathematical model of tumour self-seeding reveals secondary metastatic deposits as drivers of primary tumour growth

David Basanta, Jacob G. Scott, Philip Gerlee, 2012, Journal of The Royal Society Interface.

Neighborhood size-effects shape growing population dynamics in evolutionary public goods games

Gregory J. Kimmel, Joel s. Brown, P. Altrock, 2019, Communications Biology.

Quantifying cell line specific proliferation and migration rates in glioblastoma cells

P. Gerlee, Emil Rosén, Sven Nelander, 2019, bioRxiv.

Impact of anticipation in dynamical systems.

K. Tunstrøm, T. Lundh, P. Gerlee, 2016, Physical review. E.

Finite size effects in diffusive public goods games

P. Altrock, P. Gerlee, 2018, bioRxiv.

A filter-flow perspective of haematogenous metastasis offers a non-genetic paradigm for personalised cancer therapy.

Jacob G. Scott, Philip K Maini, Philip Gerlee, 2013, European journal of cancer.

Fast and precise inference on diffusivity in interacting particle systems

P. Gerlee, Gustav Lindwall, 2023, Journal of Mathematical Biology.

The Emergence of Overlapping Scale-free Genetic Architecture in Digital Organisms

Philip Gerlee, Torbjörn Lundh, T. Lundh, 2008, Artificial Life.

Weak Emergence and Complexity

Philip Gerlee, Henrik Thorén, P. Gerlee, 2010, ALIFE.

Time scales and wave formation in non-linear spatial public goods games

Gregory J. Kimmel, Philip Gerlee, Gregory J Kimmel, 2019, PLoS Comput. Biol..

Modelling evolutionary cell behaviour using neural networks: Application to tumour growth

P. Gerlee, A. Anderson, 2009, Biosyst..

Weak Selection and the Separation of Eco-evo Time Scales using Perturbation Analysis

P. Gerlee, 2021, Bulletin of Mathematical Biology.