M. Gitzendanner

发表

Phylotranscriptomic analysis of the origin and early diversification of land plants

Saravanaraj N. Ayyampalayam, J. G. Burleigh, Michael S. Barker, 2014, Proceedings of the National Academy of Sciences.

Making next-generation sequencing work for you: approaches and practical considerations for marker development and phylogenetics

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, Xinshuai Qi, 2012 .

One thousand plant transcriptomes and the phylogenomics of green plants

Xun Xu, Fan Yang, Ivo Grosse, 2019, Nature.

Exploring the phylogeny of rosids with a five-locus supermatrix from GenBank

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, Stephen A. Smith, 2019, bioRxiv.

The report of my death was an exaggeration: A review for researchers using microsatellites in the 21st century1

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, D. Soltis, 2016, Applications in Plant Sciences.

Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 1997, Plant Systematics and Evolution.

Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae).

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2017, Molecular phylogenetics and evolution.

Plastome Phylogenetics: 30 Years of Inferences Into Plant Evolution

Robert K. Jansen, Douglas E. Soltis, Pamela S. Soltis, 2018 .

Another look at the root of the angiosperms reveals a familiar tale.

Matthew A. Gitzendanner, B. G. Briggs, Stephen A. Smith, 2014, Systematic biology.

From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

Pamela S Soltis, J. G. Burleigh, J Gordon Burleigh, 2014, BMC Evolutionary Biology.

A 567‐Taxon Data Set for Angiosperms: The Challenges Posed by Bayesian Analyses of Large Data Sets

Douglas E. Soltis, Pamela S. Soltis, Matthew A. Gitzendanner, 2007, International Journal of Plant Sciences.

Origin of angiosperms and the puzzle of the Jurassic gap

Pamela S Soltis, Hong Wang, Jun-Bo Yang, 2019, Nature Plants.

Recent accelerated diversification in rosids occurred outside the tropics

D. Soltis, P. Soltis, R. Guralnick, 2020, Nature Communications.

Phylogenetic relationships in subtribe Scorzonerinae (Asteraceae: Cichorioideae: Cichorieae) based on ITS sequence data

D. Soltis, P. Soltis, D. Albach, 2004 .

Isolation and characterization of novel microsatellite markers for Arctium minus (Compositae).

D. Soltis, P. Soltis, M. Gitzendanner, 2010, American journal of botany.

Microsatellite marker development for the federally listed Prunus geniculata (Rosaceae).

Charlotte C. Germain-Aubrey, D. Soltis, P. Soltis, 2011, American journal of botany.

A targeted enrichment strategy for massively parallel sequencing of angiosperm plastid genomes

Gregory W. Stull, Matthew A. Gitzendanner, D. Soltis, 2013, Applications in plant sciences.

Conservation and canalization of gene expression during angiosperm diversification accompany the origin and evolution of the flower

Naomi S. Altman, Matthew A. Gitzendanner, D. Soltis, 2010, Proceedings of the National Academy of Sciences.

The potential of genomics in plant systematics

Patrick S. Schnable, Michael Chester, Gregory W. Stull, 2013 .

Modified CTAB and TRIzol protocols improve RNA extraction from chemically complex Embryophyta

Matthew A. Gitzendanner, D. Soltis, Ingrid E Jordon-Thaden, 2015, Applications in plant sciences.

A NGIOSPERM PHYLOGENY : 17 GENES , 640 TAXA 1

Catherine A. Rushworth, David C. Tank, Matthew A. Gitzendanner, 2011 .

Molecular phylogeny of Tragopogon L. (Asteraceae) based on seven nuclear loci (Adh, GapC, LFY, AP3, PI, ITS, and ETS)

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2012 .

Angiosperm Phylogeny Based on 18S/26S rDNA Sequence Data: Constructing a Large Data Set Using Next-Generation Sequence Data

G. Wong, D. Soltis, P. Soltis, 2014, International Journal of Plant Sciences.

Phylogenetic diversity of eastern Asia–eastern North America disjunct plants is mainly associated with divergence time

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2022, Plant diversity.

Population genetic variation, geographic structure, and multiple origins of autopolyploidy in Galax urceolata.

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2015, American journal of botany.

Ancestral area analyses reveal Pleistocene‐influenced evolution in a clade of coastal plain endemic plants

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2022, Journal of Biogeography.

Population genetics, speciation, and hybridization in Dicerandra (Lamiaceae), a North American Coastal Plain endemic, and implications for conservation

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2019, Conservation Genetics.

Microsatellite markers developed for Utricularia reniformis (Lentibulariaceae).

W. L. Araújo, M. Gitzendanner, A. Hilsdorf, 2012, American journal of botany.

Genome-wide association analysis of common genetic variants of resistant hypertension

Matthew A. Gitzendanner, Toshihiro Tanaka, M. Kubo, 2018, The Pharmacogenomics Journal.

Phylogenetic placement of the enigmatic and critically endangered genus Saniculiphyllum (Saxifragaceae) inferred from combined analysis of plastid and nuclear DNA sequences.

Matthew A. Gitzendanner, D. Soltis, Hua Peng, 2012, Molecular phylogenetics and evolution.

Patterns of genetic variation in rare and widespread plant congeners.

Matthew A. Gitzendanner, P. Soltis, M. Gitzendanner, 2000, American journal of botany.

Microevolutionary Processes Inferred from AFLP and Morphological Variation in Heliconia bihai (Heliconiaceae)

Matthew A. Gitzendanner, W. Kress, D. Soltis, 2005, International Journal of Plant Sciences.

Microsatellite and chloroplast DNA diversity of the invasive aquatic weed Hygrophila polysperma in native and invasive ranges

A. Mukherjee, J. Cuda, W. Overholt, 2016 .

Genetics of Cronartium ribicola. IV. Population structure in western North America

M. Gitzendanner, G. Dupper, B. Kinloch, 1998 .

Investigating the gene expression profiles of rehabilitated Florida manatees (Trichechus manatus latirostris) following red tide exposure

Matthew A. Gitzendanner, F. Yu, Margaret E. Hunter, 2020, PloS one.

Estimating rates and patterns of diversification with incomplete sampling: a case study in the rosids

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2019, bioRxiv.

Data access for the 1,000 Plants (1KP) project

Xiao Sun, Ram Samudrala, Ling-Hong Hung, 2014, GigaScience.

Are polyploids really evolutionary dead-ends (again)? A critical reappraisal of Mayrose et al. ().

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2014, The New phytologist.

Population genetic structure, genetic diversity, and natural history of the South American species of Nothofagus subgenus Lophozonia (Nothofagaceae) inferred from nuclear microsatellite data

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2014, Ecology and evolution.

Microsatellite evidence for high clonality and limited genetic diversity in Ziziphus celata (Rhamnaceae), an endangered, self-incompatible shrub endemic to the Lake Wales Ridge, Florida, USA

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, D. Soltis, 2012, Conservation Genetics.

Molecular phylogeny, biogeography, and systematics of Dicerandra (Lamiaceae), a genus endemic to the southeastern United States.

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2007, American journal of botany.

OF DICERANDRA (LAMIACEAE), A GENUS ENDEMIC TO THE SOUTHEASTERN UNITED STATES 1

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2007 .

Genetic relationships and polyploid origins in the Lippia alba complex.

L. F. Viccini, Matthew A. Gitzendanner, D. Soltis, 2020, American journal of botany.

The utility of amplified fragment length polymorphisms in phylogenetics: a comparison of homology within and between genomes.

Matthew A. Gitzendanner, K. A. Segraves, M. Gitzendanner, 2007, Systematic biology.

Use and guidelines for plant DNA analyses in forensics

M. Gitzendanner, 2012 .

Genetic insights into the evolution of genera with the eastern Asia-eastern North America floristic disjunction: a transcriptomics analysis.

Matthew A. Gitzendanner, G. Wong, D. Soltis, 2020, American journal of botany.

Evolutionary insights from comparative transcriptome and transcriptome-wide coalescence analyses in Tetrastigma hemsleyanum

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2018, BMC Plant Biology.

Plastid phylogenomic insights into relationships of all flowering plant families

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2021, BMC Biology.

Origin of angiosperms and the puzzle of the Jurassic gap

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2019, Nature Plants.

Resolving an ancient, rapid radiation in Saxifragales.

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2008, Systematic biology.

Green giant—a tiny chloroplast genome with mighty power to produce high‐value proteins: history and phylogeny

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2021, Plant biotechnology journal.

Linking genome signatures of selection and adaptation in non-model plants: exploring potential and limitations in the angiosperm Amborella.

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2018, Current opinion in plant biology.

Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages.

Gregory W. Stull, Matthew A. Gitzendanner, Stephen A. Smith, 2020, American journal of botany.

Molecular Systematics and the Conservation of Rare Species

Pamela S. Soltis, Matthew A. Gitzendanner, P. Soltis, 1999 .

An Exploration into Fern Genome Space

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2015, Genome biology and evolution.

GENETIC VARIATION IN RARE AND WIDESPREAD LOMATIUM SPECIES ( APIACEAE ): A COMPARISON OF AFLP AND SSCP DATA

P. Soltis, M. Gitzendanner, 2001 .

Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP)

Saravanaraj N. Ayyampalayam, Michael S. Barker, Matthew A. Gitzendanner, 2019, GigaScience.

Genetics of Cronartium ribicola. III. Mating System

M. Gitzendanner, G. Dupper, B. Kinloch, 1996 .

A new resource for the development of SSR markers: Millions of loci from a thousand plant transcriptomes1

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, D. Soltis, 2016, Applications in Plant Sciences.

Monophyly and relationships of the enigmatic family Peridiscaceae

D. Soltis, P. Soltis, V. Savolainen, 2007 .

Polyphyly of Tragopogon porrifolius L. (Asteraceae), a European Native with Intercontinental Disjuncts

D. Soltis, P. Soltis, M. Gitzendanner, 2007, International Journal of Plant Sciences.

Recent accelerated diversification in rosids occurred outside the tropics

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2020, Nature Communications.

Plastid phylogenomic analysis of green plants: A billion years of evolutionary history.

Pamela S Soltis, Matthew A Gitzendanner, Brad R Ruhfel, 2018, American journal of botany.

Phylogeny, divergence times, and historical biogeography of the angiosperm family Saxifragaceae.

Matthew A. Gitzendanner, Jia-bin Deng, B. Drew, 2015, Molecular phylogenetics and evolution.

An Exploration of Fern Genome Space Datasets 7-28-2014 An Exploration of Fern Genome Space

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2015 .

Are microsatellite fragment lengths useful for population-level studies? The case of Polygala lewtonii (Polygalaceae)1

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, D. Soltis, 2016, Applications in Plant Sciences.

A new, simple, highly scalable, and efficient protocol for genomic DNA extraction from diverse plant taxa

W. M. Whitten, Taliesin J. Kinser, D. Soltis, 2021, Applications in plant sciences.

Methods for exploring the plant tree of life

M. McKain, Ya Yang, N. Wickett, 2018, Applications in Plant Sciences.

The Phenotypic and Genetic Underpinnings of Flower Size in Polemoniaceae

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2016, Front. Plant Sci..

Phylogeny of Tragopogon L. (Asteraceae) Based on Internal and External Transcribed Spacer Sequence Data

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2005, International Journal of Plant Sciences.

Plastid phylogenomic insights into relationships of all flowering plant families

D. Soltis, P. Soltis, M. Chase, 2021, BMC Biology.

Phylogenetic Analysis of the Plastid Inverted Repeat for 244 Species: Insights into Deeper-Level Angiosperm Relationships from a Long, Slowly Evolving Sequence Region

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2011, International Journal of Plant Sciences.

Using Comparative Biogeography to Retrace the Origins of an Ecosystem: The Case of Four Plants Endemic to the Central Florida Scrub

Charlotte C. Germain-Aubrey, Matthew A. Gitzendanner, D. Soltis, 2014, International Journal of Plant Sciences.

Genetic Diversity of Accessions and First Generation Progeny of the Mangaba Genebank

Matthew A. Gitzendanner, D. Soltis, P. Soltis, 2018 .